RNA–Protein interactions for RNA: ENST00000443891.5

CTDSP1-204, Transcript of CTD small phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDSP1, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-204ENST00000443891 PMF1-BGLAPU3KQ54 211 aa14.32□□□□□ -0.12
CTDSP1-204ENST00000443891 M0R1B8 84 aa14.31□□□□□ -0.12
CTDSP1-204ENST00000443891 SSX4O60224 188 aa14.31□□□□□ -0.12
CTDSP1-204ENST00000443891 ANP32DO95626 131 aa14.31□□□□□ -0.12
CTDSP1-204ENST00000443891 GSNP06396 782 aa14.31□□□□□ -0.12
CTDSP1-204ENST00000443891 TFPTP0C1Z6 253 aa14.31□□□□□ -0.12
CTDSP1-204ENST00000443891 APOBEC3AP31941 199 aaPredicted RBP14.31□□□□□ -0.12
CTDSP1-204ENST00000443891 ACAA2P42765 397 aaKnown RBP14.31□□□□□ -0.12
CTDSP1-204ENST00000443891 MVDP53602 400 aa14.31□□□□□ -0.12
CTDSP1-204ENST00000443891 WDR4P57081 412 aaKnown RBP14.31□□□□□ -0.12
CTDSP1-204ENST00000443891 LOXL1Q08397 574 aaPredicted RBP14.31□□□□□ -0.12
CTDSP1-204ENST00000443891 COX20Q5RI15 118 aa14.31□□□□□ -0.12
CTDSP1-204ENST00000443891 TSPO2Q5TGU0 170 aa14.31□□□□□ -0.12
CTDSP1-204ENST00000443891 TMEM225Q6GV28 225 aa14.31□□□□□ -0.12
CTDSP1-204ENST00000443891 PODNL1Q6PEZ8 512 aa14.31□□□□□ -0.12
CTDSP1-204ENST00000443891 HMGN2P46Q86SG4 172 aa14.31□□□□□ -0.12
CTDSP1-204ENST00000443891 HIPK1Q86Z02 1210 aa14.31□□□□□ -0.12
CTDSP1-204ENST00000443891 OR9K2Q8NGE7 335 aa14.31□□□□□ -0.12
CTDSP1-204ENST00000443891 STK35Q8TDR2 534 aa14.31□□□□□ -0.12
CTDSP1-204ENST00000443891 SPATA9Q9BWV2 254 aa14.31□□□□□ -0.12
CTDSP1-204ENST00000443891 WDR55Q9H6Y2 383 aaPredicted RBP14.31□□□□□ -0.12
CTDSP1-204ENST00000443891 ADAM21Q9UKJ8 722 aa14.31□□□□□ -0.12
CTDSP1-204ENST00000443891 TMEM120BA0PK00 339 aa14.3□□□□□ -0.12
CTDSP1-204ENST00000443891 ZC3H12DA2A288 527 aaKnown RBP14.3□□□□□ -0.12
CTDSP1-204ENST00000443891 NDUFS7O75251 213 aa14.3□□□□□ -0.12
CTDSP1-204ENST00000443891 HOXB1P14653 301 aaPredicted RBP14.3□□□□□ -0.12
CTDSP1-204ENST00000443891 CRATP43155 626 aa14.3□□□□□ -0.12
CTDSP1-204ENST00000443891 DSTNP60981 165 aa14.3□□□□□ -0.12
CTDSP1-204ENST00000443891 IRX1P78414 480 aaPredicted RBP14.3□□□□□ -0.12
CTDSP1-204ENST00000443891 CEACAM7Q14002 265 aa14.3□□□□□ -0.12
CTDSP1-204ENST00000443891 OR7A5Q15622 319 aa14.3□□□□□ -0.12
CTDSP1-204ENST00000443891 MAPK11Q15759 364 aa14.3□□□□□ -0.12
CTDSP1-204ENST00000443891 C3orf36Q3SXR2 165 aa14.3□□□□□ -0.12
CTDSP1-204ENST00000443891 NXNQ6DKJ4 435 aa14.3□□□□□ -0.12
CTDSP1-204ENST00000443891 C5orf46Q6UWT4 87 aa14.3□□□□□ -0.12
CTDSP1-204ENST00000443891 CXXC5Q7LFL8 322 aaKnown RBP14.3□□□□□ -0.12
CTDSP1-204ENST00000443891 AAED1Q7RTV5 226 aa14.3□□□□□ -0.12
CTDSP1-204ENST00000443891 TMEM99Q8N816 258 aa14.3□□□□□ -0.12
CTDSP1-204ENST00000443891 ANKRD42Q8N9B4 389 aa14.3□□□□□ -0.12
CTDSP1-204ENST00000443891 ZIC4Q8N9L1 334 aa14.3□□□□□ -0.12
CTDSP1-204ENST00000443891 ANKK1Q8NFD2 765 aa14.3□□□□□ -0.12
CTDSP1-204ENST00000443891 SLC38A5Q8WUX1 472 aa14.3□□□□□ -0.12
CTDSP1-204ENST00000443891 PROX1Q92786 737 aa14.3□□□□□ -0.12
CTDSP1-204ENST00000443891 MDFIQ99750 246 aa14.3□□□□□ -0.12
CTDSP1-204ENST00000443891 BCL2L10Q9HD36 194 aa14.3□□□□□ -0.12
CTDSP1-204ENST00000443891 TMEM45AQ9NWC5 275 aa14.3□□□□□ -0.12
CTDSP1-204ENST00000443891 TMEM160Q9NX00 188 aa14.3□□□□□ -0.12
CTDSP1-204ENST00000443891 NKIRAS1Q9NYS0 192 aa14.3□□□□□ -0.12
CTDSP1-204ENST00000443891 FBXO9Q9UK97 447 aaPredicted RBP14.3□□□□□ -0.12
CTDSP1-204ENST00000443891 RASD1Q9Y272 281 aa14.3□□□□□ -0.12
CTDSP1-204ENST00000443891 A8MV72 311 aaPredicted RBP14.29□□□□□ -0.12
CTDSP1-204ENST00000443891 KLF11O14901 512 aa14.29□□□□□ -0.12
CTDSP1-204ENST00000443891 UBDO15205 165 aa14.29□□□□□ -0.12
CTDSP1-204ENST00000443891 NPIPB7O75200 414 aa14.29□□□□□ -0.12
CTDSP1-204ENST00000443891 C1QCP02747 245 aa14.29□□□□□ -0.12
CTDSP1-204ENST00000443891 BCHEP06276 602 aa14.29□□□□□ -0.12
CTDSP1-204ENST00000443891 EFNA4P52798 201 aa14.29□□□□□ -0.12
CTDSP1-204ENST00000443891 FOXG1P55316 489 aaPredicted RBP14.29□□□□□ -0.12
CTDSP1-204ENST00000443891 FADDQ13158 208 aa14.29□□□□□ -0.12
CTDSP1-204ENST00000443891 ZNF836Q6ZNA1 936 aa14.29□□□□□ -0.12
CTDSP1-204ENST00000443891 MAPK1IP1LQ8NDC0 245 aa14.29□□□□□ -0.12
CTDSP1-204ENST00000443891 MFSD8Q8NHS3 518 aa14.29□□□□□ -0.12
CTDSP1-204ENST00000443891 PNPT1Q8TCS8 783 aaKnown RBP14.29□□□□□ -0.12
CTDSP1-204ENST00000443891 MAGEE2Q8TD90 523 aaPredicted RBP14.29□□□□□ -0.12
CTDSP1-204ENST00000443891 TNFRSF13CQ96RJ3 184 aa14.29□□□□□ -0.12
CTDSP1-204ENST00000443891 MANSC1Q9H8J5 431 aa14.29□□□□□ -0.12
CTDSP1-204ENST00000443891 C12orf10Q9HB07 376 aa14.29□□□□□ -0.12
CTDSP1-204ENST00000443891 RLIMQ9NVW2 624 aa14.29□□□□□ -0.12
CTDSP1-204ENST00000443891 ZNF443Q9Y2A4 671 aaPredicted RBP14.29□□□□□ -0.12
CTDSP1-204ENST00000443891 A0A096LNT2 108 aa14.28□□□□□ -0.12
CTDSP1-204ENST00000443891 KRT33AO76009 404 aa14.28□□□□□ -0.12
CTDSP1-204ENST00000443891 AKR7A3O95154 331 aa14.28□□□□□ -0.12
CTDSP1-204ENST00000443891 GKN3PP0CG01 181 aa14.28□□□□□ -0.12
CTDSP1-204ENST00000443891 BMP2P12643 396 aa14.28□□□□□ -0.12
CTDSP1-204ENST00000443891 ETFAP13804 333 aa14.28□□□□□ -0.12
CTDSP1-204ENST00000443891 NCF2P19878 526 aaPredicted RBP14.28□□□□□ -0.12
CTDSP1-204ENST00000443891 MRPL19P49406 292 aaKnown RBP14.28□□□□□ -0.12
CTDSP1-204ENST00000443891 POLR2JP52435 117 aaKnown RBP14.28□□□□□ -0.12
CTDSP1-204ENST00000443891 SH3BGRP55822 239 aaPredicted RBP14.28□□□□□ -0.12
CTDSP1-204ENST00000443891 VLDLRP98155 873 aa14.28□□□□□ -0.12
CTDSP1-204ENST00000443891 C1orf140Q5VVS0 124 aa14.28□□□□□ -0.12
CTDSP1-204ENST00000443891 B3GLCTQ6Y288 498 aa14.28□□□□□ -0.12
CTDSP1-204ENST00000443891 VRK2Q86Y07 508 aa14.28□□□□□ -0.12
CTDSP1-204ENST00000443891 FAM169BQ8N8A8 192 aa14.28□□□□□ -0.12
CTDSP1-204ENST00000443891 C3orf49Q96BT1 292 aa14.28□□□□□ -0.12
CTDSP1-204ENST00000443891 DNAJA3Q96EY1 480 aa14.28□□□□□ -0.12
CTDSP1-204ENST00000443891 ZNF385AQ96PM9 386 aaKnown RBP14.28□□□□□ -0.12
CTDSP1-204ENST00000443891 LINC00470Q9BZP3 86 aa14.28□□□□□ -0.12
CTDSP1-204ENST00000443891 YAE1D1Q9NRH1 226 aa14.28□□□□□ -0.12
CTDSP1-204ENST00000443891 ATP23Q9Y6H3 246 aa14.28□□□□□ -0.12
CTDSP1-204ENST00000443891 IGHV4-30-2A0A087WSY4 118 aa14.27□□□□□ -0.13
CTDSP1-204ENST00000443891 ARPC4-TTLL3A0A0A6YYG9 625 aa14.27□□□□□ -0.13
CTDSP1-204ENST00000443891 A0A1W2PR80 420 aa14.27□□□□□ -0.13
CTDSP1-204ENST00000443891 TMEM229AB2RXF0 380 aa14.27□□□□□ -0.13
CTDSP1-204ENST00000443891 ZNF587BE7ETH6 402 aa14.27□□□□□ -0.13
CTDSP1-204ENST00000443891 FRS3O43559 492 aa14.27□□□□□ -0.13
CTDSP1-204ENST00000443891 OR2T1O43869 369 aa14.27□□□□□ -0.13
CTDSP1-204ENST00000443891 FZD7O75084 574 aa14.27□□□□□ -0.13
CTDSP1-204ENST00000443891 PDE5AO76074 875 aa14.27□□□□□ -0.13
CTDSP1-204ENST00000443891 AHSA1O95433 338 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms