RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 DIDO1Q9BTC0 2240 aaKnown RBP10.99□□□□□ -0.65
USP1-203ENST00000442679 ZNF814B7Z6K7 855 aa10.98□□□□□ -0.65
USP1-203ENST00000442679 MSTNO14793 375 aa10.98□□□□□ -0.65
USP1-203ENST00000442679 PDE5AO76074 875 aa10.98□□□□□ -0.65
USP1-203ENST00000442679 CGAP01215 116 aa10.98□□□□□ -0.65
USP1-203ENST00000442679 THRBP10828 461 aa10.98□□□□□ -0.65
USP1-203ENST00000442679 AGTR1P30556 359 aa10.98□□□□□ -0.65
USP1-203ENST00000442679 UQCRC1P31930 480 aa10.98□□□□□ -0.65
USP1-203ENST00000442679 IFNA8P32881 189 aa10.98□□□□□ -0.65
USP1-203ENST00000442679 YAP1P46937 504 aaKnown RBP10.98□□□□□ -0.65
USP1-203ENST00000442679 CBX1P83916 185 aa10.98□□□□□ -0.65
USP1-203ENST00000442679 FOXD4Q12950 439 aaPredicted RBP10.98□□□□□ -0.65
USP1-203ENST00000442679 TRIM25Q14258 630 aaKnown RBP10.98□□□□□ -0.65
USP1-203ENST00000442679 PDK3Q15120 406 aa10.98□□□□□ -0.65
USP1-203ENST00000442679 DNAL1Q4LDG9 190 aa10.98□□□□□ -0.65
USP1-203ENST00000442679 OTUD3Q5T2D3 398 aaPredicted RBP10.98□□□□□ -0.65
USP1-203ENST00000442679 ABLIM2Q6H8Q1 611 aa10.98□□□□□ -0.65
USP1-203ENST00000442679 TTC33Q6PID6 262 aaPredicted RBP10.98□□□□□ -0.65
USP1-203ENST00000442679 PAQR6Q6TCH4 344 aa10.98□□□□□ -0.65
USP1-203ENST00000442679 WDR88Q6ZMY6 472 aa10.98□□□□□ -0.65
USP1-203ENST00000442679 TMEM99Q8N816 258 aa10.98□□□□□ -0.65
USP1-203ENST00000442679 ZNF610Q8N9Z0 462 aa10.98□□□□□ -0.65
USP1-203ENST00000442679 OR6K3Q8NGY3 331 aa10.98□□□□□ -0.65
USP1-203ENST00000442679 RNASE6Q93091 150 aaKnown RBP10.98□□□□□ -0.65
USP1-203ENST00000442679 SLC7A6OSQ96CW6 309 aaPredicted RBP10.98□□□□□ -0.65
USP1-203ENST00000442679 PYURFQ96I23 114 aa10.98□□□□□ -0.65
USP1-203ENST00000442679 CLPTM1LQ96KA5 538 aa10.98□□□□□ -0.65
USP1-203ENST00000442679 PSD2Q9BQI7 771 aa10.98□□□□□ -0.65
USP1-203ENST00000442679 PRSS27Q9BQR3 290 aa10.98□□□□□ -0.65
USP1-203ENST00000442679 TACO1Q9BSH4 297 aaKnown RBP10.98□□□□□ -0.65
USP1-203ENST00000442679 OPN3Q9H1Y3 402 aaPredicted RBP10.98□□□□□ -0.65
USP1-203ENST00000442679 BCO1Q9HAY6 547 aa10.98□□□□□ -0.65
USP1-203ENST00000442679 NPDC1Q9NQX5 325 aaPredicted RBP10.98□□□□□ -0.65
USP1-203ENST00000442679 PLSCR4Q9NRQ2 329 aa10.98□□□□□ -0.65
USP1-203ENST00000442679 ACTR3BQ9P1U1 418 aa10.98□□□□□ -0.65
USP1-203ENST00000442679 ING1Q9UK53 422 aaPredicted RBP10.98□□□□□ -0.65
USP1-203ENST00000442679 A4GNTQ9UNA3 340 aa10.98□□□□□ -0.65
USP1-203ENST00000442679 IGKV3D-15A0A087WSY6 115 aa10.97□□□□□ -0.65
USP1-203ENST00000442679 AQP7P3A6NL99 342 aa10.97□□□□□ -0.65
USP1-203ENST00000442679 ZNF724A8MTY0 619 aa10.97□□□□□ -0.65
USP1-203ENST00000442679 A8MXE2 369 aa10.97□□□□□ -0.65
USP1-203ENST00000442679 FTCDNL1E5RQL4 147 aa10.97□□□□□ -0.65
USP1-203ENST00000442679 J3KTA2 159 aa10.97□□□□□ -0.65
USP1-203ENST00000442679 RAMP1O60894 148 aa10.97□□□□□ -0.65
USP1-203ENST00000442679 ATP5HO75947 161 aa10.97□□□□□ -0.65
USP1-203ENST00000442679 CD8BP10966 210 aa10.97□□□□□ -0.65
USP1-203ENST00000442679 CBLP22681 906 aa10.97□□□□□ -0.65
USP1-203ENST00000442679 GTF2E2P29084 291 aaKnown RBP10.97□□□□□ -0.65
USP1-203ENST00000442679 FBXL19-AS1Q494R0 122 aa10.97□□□□□ -0.65
USP1-203ENST00000442679 FAM69AQ5T7M9 428 aa10.97□□□□□ -0.65
USP1-203ENST00000442679 HIST2H2BCQ6DN03 193 aa10.97□□□□□ -0.65
USP1-203ENST00000442679 TMEM225Q6GV28 225 aa10.97□□□□□ -0.65
USP1-203ENST00000442679 CYP2R1Q6VVX0 501 aa10.97□□□□□ -0.65
USP1-203ENST00000442679 NUFIP2Q7Z417 695 aaKnown RBP10.97□□□□□ -0.65
USP1-203ENST00000442679 CYP4Z1Q86W10 505 aa10.97□□□□□ -0.65
USP1-203ENST00000442679 DHFR2Q86XF0 187 aa10.97□□□□□ -0.65
USP1-203ENST00000442679 NKAIN4Q8IVV8 208 aa10.97□□□□□ -0.65
USP1-203ENST00000442679 C10orf53Q8N6V4 93 aa10.97□□□□□ -0.65
USP1-203ENST00000442679 FAM86B1Q8N7N1 296 aa10.97□□□□□ -0.65
USP1-203ENST00000442679 OR6S1Q8NH40 331 aa10.97□□□□□ -0.65
USP1-203ENST00000442679 PRRC1Q96M27 445 aa10.97□□□□□ -0.65
USP1-203ENST00000442679 ZNF300Q96RE9 604 aaPredicted RBP10.97□□□□□ -0.65
USP1-203ENST00000442679 FNDC11Q9BVV2 318 aa10.97□□□□□ -0.65
USP1-203ENST00000442679 RBM24Q9BX46 236 aaKnown RBP10.97□□□□□ -0.65
USP1-203ENST00000442679 MUC13Q9H3R2 512 aa10.97□□□□□ -0.65
USP1-203ENST00000442679 C12orf49Q9H741 205 aa10.97□□□□□ -0.65
USP1-203ENST00000442679 EMC3Q9P0I2 261 aa10.97□□□□□ -0.65
USP1-203ENST00000442679 RHCGQ9UBD6 479 aa10.97□□□□□ -0.65
USP1-203ENST00000442679 ENPP4Q9Y6X5 453 aa10.97□□□□□ -0.65
USP1-203ENST00000442679 V9GYQ6 96 aa10.97□□□□□ -0.65
USP1-203ENST00000442679 ARHGAP21Q5T5U3 1957 aa10.97□□□□□ -0.65
USP1-203ENST00000442679 ZNF716A6NP11 495 aa10.96□□□□□ -0.65
USP1-203ENST00000442679 KPNA4O00629 521 aaPredicted RBP10.96□□□□□ -0.65
USP1-203ENST00000442679 GPR171O14626 319 aa10.96□□□□□ -0.65
USP1-203ENST00000442679 FFAR1O14842 300 aa10.96□□□□□ -0.65
USP1-203ENST00000442679 DNAJC8O75937 253 aaPredicted RBP10.96□□□□□ -0.65
USP1-203ENST00000442679 BGLAPP02818 100 aa10.96□□□□□ -0.65
USP1-203ENST00000442679 ATP6V1B2P21281 511 aa10.96□□□□□ -0.65
USP1-203ENST00000442679 GRPRP30550 384 aa10.96□□□□□ -0.65
USP1-203ENST00000442679 RBM34P42696 430 aaKnown RBP10.96□□□□□ -0.65
USP1-203ENST00000442679 RASSF2P50749 326 aa10.96□□□□□ -0.65
USP1-203ENST00000442679 SLC16A1P53985 500 aa10.96□□□□□ -0.65
USP1-203ENST00000442679 MS4A2Q01362 244 aa10.96□□□□□ -0.65
USP1-203ENST00000442679 LTBQ06643 244 aa10.96□□□□□ -0.65
USP1-203ENST00000442679 ST3GAL3Q11203 375 aa10.96□□□□□ -0.65
USP1-203ENST00000442679 SLC17A1Q14916 467 aa10.96□□□□□ -0.65
USP1-203ENST00000442679 MFSD13AQ14CX5 517 aa10.96□□□□□ -0.65
USP1-203ENST00000442679 ZNF474Q6S9Z5 364 aaPredicted RBP10.96□□□□□ -0.65
USP1-203ENST00000442679 TSEN54Q7Z6J9 526 aaKnown RBP10.96□□□□□ -0.65
USP1-203ENST00000442679 GALNT5Q7Z7M9 940 aa10.96□□□□□ -0.65
USP1-203ENST00000442679 GPAT4Q86UL3 456 aa10.96□□□□□ -0.65
USP1-203ENST00000442679 C7orf34Q96L11 122 aa10.96□□□□□ -0.65
USP1-203ENST00000442679 HS6ST2Q96MM7 605 aa10.96□□□□□ -0.65
USP1-203ENST00000442679 ZNF426Q9BUY5 554 aa10.96□□□□□ -0.65
USP1-203ENST00000442679 SLC19A3Q9BZV2 496 aa10.96□□□□□ -0.65
USP1-203ENST00000442679 C6orf203Q9P0P8 240 aaPredicted RBP10.96□□□□□ -0.65
USP1-203ENST00000442679 FOXD3Q9UJU5 478 aaPredicted RBP10.96□□□□□ -0.65
USP1-203ENST00000442679 FAM32AQ9Y421 112 aaKnown RBP10.96□□□□□ -0.65
USP1-203ENST00000442679 HECTD1Q9ULT8 2610 aa10.96□□□□□ -0.66
USP1-203ENST00000442679 LRRN3E7EW58 273 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms