RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 GALNT5Q7Z7M9 940 aa13.37□□□□□ -0.27
CSNK1E-210ENST00000442216 RBM45Q8IUH3 476 aaKnown RBP13.37□□□□□ -0.27
CSNK1E-210ENST00000442216 PTDSS2Q9BVG9 487 aa13.37□□□□□ -0.27
CSNK1E-210ENST00000442216 GMPR2Q9P2T1 348 aaKnown RBP13.37□□□□□ -0.27
CSNK1E-210ENST00000442216 CD300AQ9UGN4 299 aa13.37□□□□□ -0.27
CSNK1E-210ENST00000442216 RPS6KA6Q9UK32 745 aa13.37□□□□□ -0.27
CSNK1E-210ENST00000442216 IGKV1D-42A0A075B6H8 117 aa13.36□□□□□ -0.27
CSNK1E-210ENST00000442216 TUBAL3A6NHL2 446 aa13.36□□□□□ -0.27
CSNK1E-210ENST00000442216 CPSF4LA6NMK7 179 aaKnown RBP13.36□□□□□ -0.27
CSNK1E-210ENST00000442216 GMNNO75496 209 aa13.36□□□□□ -0.27
CSNK1E-210ENST00000442216 CNOT4O95628 575 aaKnown RBP13.36□□□□□ -0.27
CSNK1E-210ENST00000442216 THRBP10828 461 aa13.36□□□□□ -0.27
CSNK1E-210ENST00000442216 POU2F1P14859 743 aa13.36□□□□□ -0.27
CSNK1E-210ENST00000442216 KLK2P20151 261 aa13.36□□□□□ -0.27
CSNK1E-210ENST00000442216 SSTR2P30874 369 aa13.36□□□□□ -0.27
CSNK1E-210ENST00000442216 CPOXP36551 454 aa13.36□□□□□ -0.27
CSNK1E-210ENST00000442216 KIR2DL3P43628 341 aa13.36□□□□□ -0.27
CSNK1E-210ENST00000442216 RPS5P46782 204 aaKnown RBP13.36□□□□□ -0.27
CSNK1E-210ENST00000442216 OR3A2P47893 321 aa13.36□□□□□ -0.27
CSNK1E-210ENST00000442216 SLC17A1Q14916 467 aa13.36□□□□□ -0.27
CSNK1E-210ENST00000442216 GLYATQ6IB77 296 aa13.36□□□□□ -0.27
CSNK1E-210ENST00000442216 TFAP2EQ6VUC0 442 aa13.36□□□□□ -0.27
CSNK1E-210ENST00000442216 NUFIP2Q7Z417 695 aaKnown RBP13.36□□□□□ -0.27
CSNK1E-210ENST00000442216 GDF7Q7Z4P5 450 aa13.36□□□□□ -0.27
CSNK1E-210ENST00000442216 CCDC103Q8IW40 242 aa13.36□□□□□ -0.27
CSNK1E-210ENST00000442216 DEFB107AQ8IZN7 70 aa13.36□□□□□ -0.27
CSNK1E-210ENST00000442216 ARHGAP24Q8N264 748 aa13.36□□□□□ -0.27
CSNK1E-210ENST00000442216 TMEM99Q8N816 258 aa13.36□□□□□ -0.27
CSNK1E-210ENST00000442216 RNF217Q8TC41 542 aa13.36□□□□□ -0.27
CSNK1E-210ENST00000442216 FAM222BQ8WU58 562 aa13.36□□□□□ -0.27
CSNK1E-210ENST00000442216 FAM162AQ96A26 154 aa13.36□□□□□ -0.27
CSNK1E-210ENST00000442216 KTI12Q96EK9 354 aaPredicted RBP13.36□□□□□ -0.27
CSNK1E-210ENST00000442216 DNAJA3Q96EY1 480 aa13.36□□□□□ -0.27
CSNK1E-210ENST00000442216 TPD52L3Q96J77 140 aa13.36□□□□□ -0.27
CSNK1E-210ENST00000442216 ZNF300Q96RE9 604 aaPredicted RBP13.36□□□□□ -0.27
CSNK1E-210ENST00000442216 CDRT15Q96T59 188 aa13.36□□□□□ -0.27
CSNK1E-210ENST00000442216 ZNF426Q9BUY5 554 aa13.36□□□□□ -0.27
CSNK1E-210ENST00000442216 SLC19A3Q9BZV2 496 aa13.36□□□□□ -0.27
CSNK1E-210ENST00000442216 OR10A4Q9H209 315 aa13.36□□□□□ -0.27
CSNK1E-210ENST00000442216 GORASP2Q9H8Y8 452 aa13.36□□□□□ -0.27
CSNK1E-210ENST00000442216 B2RBV5 119 aa13.35□□□□□ -0.27
CSNK1E-210ENST00000442216 ZNF814B7Z6K7 855 aa13.35□□□□□ -0.27
CSNK1E-210ENST00000442216 AKR7A3O95154 331 aa13.35□□□□□ -0.27
CSNK1E-210ENST00000442216 OR5F1O95221 314 aa13.35□□□□□ -0.27
CSNK1E-210ENST00000442216 GOSR1O95249 250 aa13.35□□□□□ -0.27
CSNK1E-210ENST00000442216 LYPD3O95274 346 aa13.35□□□□□ -0.27
CSNK1E-210ENST00000442216 MT-ATP6P00846 226 aa13.35□□□□□ -0.27
CSNK1E-210ENST00000442216 GTF2E2P29084 291 aaKnown RBP13.35□□□□□ -0.27
CSNK1E-210ENST00000442216 IFNA8P32881 189 aa13.35□□□□□ -0.27
CSNK1E-210ENST00000442216 P2RY4P51582 365 aa13.35□□□□□ -0.27
CSNK1E-210ENST00000442216 TAS2R41P59536 307 aa13.35□□□□□ -0.27
CSNK1E-210ENST00000442216 FAM27E3Q08E93 113 aa13.35□□□□□ -0.27
CSNK1E-210ENST00000442216 POU4F3Q15319 338 aa13.35□□□□□ -0.27
CSNK1E-210ENST00000442216 TMEM225Q6GV28 225 aa13.35□□□□□ -0.27
CSNK1E-210ENST00000442216 TTC33Q6PID6 262 aaPredicted RBP13.35□□□□□ -0.27
CSNK1E-210ENST00000442216 TRPM8Q7Z2W7 1104 aa13.35□□□□□ -0.27
CSNK1E-210ENST00000442216 ZNF295-AS1Q8N0V1 137 aa13.35□□□□□ -0.27
CSNK1E-210ENST00000442216 ADPRHL1Q8NDY3 354 aa13.35□□□□□ -0.27
CSNK1E-210ENST00000442216 GEMIN6Q8WXD5 167 aaKnown RBP13.35□□□□□ -0.27
CSNK1E-210ENST00000442216 TAAR8Q969N4 342 aa13.35□□□□□ -0.27
CSNK1E-210ENST00000442216 DACH2Q96NX9 599 aa13.35□□□□□ -0.27
CSNK1E-210ENST00000442216 C1orf21Q9H246 121 aa13.35□□□□□ -0.27
CSNK1E-210ENST00000442216 C12orf49Q9H741 205 aa13.35□□□□□ -0.27
CSNK1E-210ENST00000442216 PARPBPQ9NWS1 579 aa13.35□□□□□ -0.27
CSNK1E-210ENST00000442216 NDRG3Q9UGV2 375 aa13.35□□□□□ -0.27
CSNK1E-210ENST00000442216 MAGEL2Q9UJ55 1249 aa13.35□□□□□ -0.27
CSNK1E-210ENST00000442216 SLC7A7Q9UM01 511 aa13.35□□□□□ -0.27
CSNK1E-210ENST00000442216 RASD1Q9Y272 281 aa13.35□□□□□ -0.27
CSNK1E-210ENST00000442216 B3GALT5Q9Y2C3 310 aa13.35□□□□□ -0.27
CSNK1E-210ENST00000442216 NOSIPQ9Y314 301 aaKnown RBP13.35□□□□□ -0.27
CSNK1E-210ENST00000442216 CORINQ9Y5Q5 1042 aa13.35□□□□□ -0.27
CSNK1E-210ENST00000442216 FLVCR1Q9Y5Y0 555 aa13.35□□□□□ -0.27
CSNK1E-210ENST00000442216 ANKHD1Q8IWZ3 2542 aaKnown RBP13.34□□□□□ -0.27
CSNK1E-210ENST00000442216 C16orf97H3BN30 126 aa13.34□□□□□ -0.27
CSNK1E-210ENST00000442216 RAMP1O60894 148 aa13.34□□□□□ -0.27
CSNK1E-210ENST00000442216 ZNF682O95780 498 aa13.34□□□□□ -0.27
CSNK1E-210ENST00000442216 SERPINA1P01009 418 aa13.34□□□□□ -0.27
CSNK1E-210ENST00000442216 IGF2P01344 180 aa13.34□□□□□ -0.27
CSNK1E-210ENST00000442216 THY1P04216 161 aa13.34□□□□□ -0.27
CSNK1E-210ENST00000442216 T-ENOLP0DO92 83 aa13.34□□□□□ -0.27
CSNK1E-210ENST00000442216 EPXP11678 715 aa13.34□□□□□ -0.27
CSNK1E-210ENST00000442216 PSMB1P20618 241 aaKnown RBP13.34□□□□□ -0.27
CSNK1E-210ENST00000442216 UGT2B10P36537 528 aa13.34□□□□□ -0.27
CSNK1E-210ENST00000442216 RBM34P42696 430 aaKnown RBP13.34□□□□□ -0.27
CSNK1E-210ENST00000442216 OR1E2P47887 323 aa13.34□□□□□ -0.27
CSNK1E-210ENST00000442216 IFI44LQ53G44 452 aa13.34□□□□□ -0.27
CSNK1E-210ENST00000442216 DEF8Q6ZN54 512 aa13.34□□□□□ -0.27
CSNK1E-210ENST00000442216 TSPYL5Q86VY4 417 aaPredicted RBP13.34□□□□□ -0.27
CSNK1E-210ENST00000442216 GABRG1Q8N1C3 465 aa13.34□□□□□ -0.27
CSNK1E-210ENST00000442216 SCAIQ8N9R8 606 aa13.34□□□□□ -0.27
CSNK1E-210ENST00000442216 RBM15BQ8NDT2 890 aaKnown RBP13.34□□□□□ -0.27
CSNK1E-210ENST00000442216 TMEM45BQ96B21 275 aa13.34□□□□□ -0.27
CSNK1E-210ENST00000442216 SLC25A36Q96CQ1 311 aa13.34□□□□□ -0.27
CSNK1E-210ENST00000442216 SLC41A3Q96GZ6 507 aa13.34□□□□□ -0.27
CSNK1E-210ENST00000442216 PRRC1Q96M27 445 aa13.34□□□□□ -0.27
CSNK1E-210ENST00000442216 HS6ST2Q96MM7 605 aa13.34□□□□□ -0.27
CSNK1E-210ENST00000442216 HDHD5Q9BXW7 423 aa13.34□□□□□ -0.27
CSNK1E-210ENST00000442216 DCAF13Q9NV06 445 aaKnown RBP13.34□□□□□ -0.27
CSNK1E-210ENST00000442216 EGFL7Q9UHF1 273 aa13.34□□□□□ -0.27
CSNK1E-210ENST00000442216 RIMS3Q9UJD0 308 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms