RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 C3orf49Q96BT1 292 aa17.51■□□□□ 0.39
SHROOM1-204ENST00000440118 ALG2Q9H553 416 aa17.51■□□□□ 0.39
SHROOM1-204ENST00000440118 SELENONQ9NZV5 590 aa17.51■□□□□ 0.39
SHROOM1-204ENST00000440118 SLAMF8Q9P0V8 285 aa17.51■□□□□ 0.39
SHROOM1-204ENST00000440118 POU2F3Q9UKI9 436 aa17.51■□□□□ 0.39
SHROOM1-204ENST00000440118 ANGPT4Q9Y264 503 aa17.51■□□□□ 0.39
SHROOM1-204ENST00000440118 HEATR1Q9H583 2144 aaKnown RBP17.5■□□□□ 0.39
SHROOM1-204ENST00000440118 AQP7P3A6NL99 342 aa17.5■□□□□ 0.39
SHROOM1-204ENST00000440118 ABCD4O14678 606 aa17.5■□□□□ 0.39
SHROOM1-204ENST00000440118 HOXB9P17482 250 aaPredicted RBP17.5■□□□□ 0.39
SHROOM1-204ENST00000440118 PRKAR1BP31321 381 aa17.5■□□□□ 0.39
SHROOM1-204ENST00000440118 CDH11P55287 796 aa17.5■□□□□ 0.39
SHROOM1-204ENST00000440118 TGFBR3Q03167 851 aa17.5■□□□□ 0.39
SHROOM1-204ENST00000440118 SCARB2Q14108 478 aa17.5■□□□□ 0.39
SHROOM1-204ENST00000440118 SLC17A1Q14916 467 aa17.5■□□□□ 0.39
SHROOM1-204ENST00000440118 ZNF672Q499Z4 452 aaPredicted RBP17.5■□□□□ 0.39
SHROOM1-204ENST00000440118 OR7E24Q6IFN5 339 aa17.5■□□□□ 0.39
SHROOM1-204ENST00000440118 KLHL24Q6TFL4 600 aa17.5■□□□□ 0.39
SHROOM1-204ENST00000440118 PRSS57Q6UWY2 283 aa17.5■□□□□ 0.39
SHROOM1-204ENST00000440118 TMEM108Q6UXF1 575 aa17.5■□□□□ 0.39
SHROOM1-204ENST00000440118 AAED1Q7RTV5 226 aa17.5■□□□□ 0.39
SHROOM1-204ENST00000440118 DHDDSQ86SQ9 333 aa17.5■□□□□ 0.39
SHROOM1-204ENST00000440118 MSRB3Q8IXL7 192 aa17.5■□□□□ 0.39
SHROOM1-204ENST00000440118 PIAS4Q8N2W9 510 aaPredicted RBP17.5■□□□□ 0.39
SHROOM1-204ENST00000440118 OR52E4Q8NGH9 312 aa17.5■□□□□ 0.39
SHROOM1-204ENST00000440118 SLC35B4Q969S0 331 aa17.5■□□□□ 0.39
SHROOM1-204ENST00000440118 SLC25A36Q96CQ1 311 aa17.5■□□□□ 0.39
SHROOM1-204ENST00000440118 ZNF607Q96SK3 696 aa17.5■□□□□ 0.39
SHROOM1-204ENST00000440118 BDH2Q9BUT1 245 aa17.5■□□□□ 0.39
SHROOM1-204ENST00000440118 FAIMQ9NVQ4 179 aa17.5■□□□□ 0.39
SHROOM1-204ENST00000440118 LEF1Q9UJU2 399 aaPredicted RBP17.5■□□□□ 0.39
SHROOM1-204ENST00000440118 A0A0G2JND7 137 aa17.49■□□□□ 0.39
SHROOM1-204ENST00000440118 A0A1W2PR80 420 aa17.49■□□□□ 0.39
SHROOM1-204ENST00000440118 DPRXA6NFQ7 191 aa17.49■□□□□ 0.39
SHROOM1-204ENST00000440118 FAM171A2A8MVW0 826 aa17.49■□□□□ 0.39
SHROOM1-204ENST00000440118 H7C1Q1 480 aa17.49■□□□□ 0.39
SHROOM1-204ENST00000440118 SMAD7O15105 426 aaKnown RBP17.49■□□□□ 0.39
SHROOM1-204ENST00000440118 RRP9O43818 475 aaKnown RBP17.49■□□□□ 0.39
SHROOM1-204ENST00000440118 H2AFXP16104 143 aaPredicted RBP17.49■□□□□ 0.39
SHROOM1-204ENST00000440118 AQP1P29972 269 aa17.49■□□□□ 0.39
SHROOM1-204ENST00000440118 ZNF83P51522 516 aa17.49■□□□□ 0.39
SHROOM1-204ENST00000440118 CYP51A1Q16850 503 aa17.49■□□□□ 0.39
SHROOM1-204ENST00000440118 CLEC9AQ6UXN8 241 aa17.49■□□□□ 0.39
SHROOM1-204ENST00000440118 SMAP2Q8WU79 429 aaPredicted RBP17.49■□□□□ 0.39
SHROOM1-204ENST00000440118 NEUROG1Q92886 237 aa17.49■□□□□ 0.39
SHROOM1-204ENST00000440118 SIKE1Q9BRV8 207 aa17.49■□□□□ 0.39
SHROOM1-204ENST00000440118 SF3B5Q9BWJ5 86 aaKnown RBP17.49■□□□□ 0.39
SHROOM1-204ENST00000440118 CHST2Q9Y4C5 530 aa17.49■□□□□ 0.39
SHROOM1-204ENST00000440118 PLCE1Q9P212 2302 aa17.48■□□□□ 0.39
SHROOM1-204ENST00000440118 PRORSD1PA6NEY8 169 aa17.48■□□□□ 0.39
SHROOM1-204ENST00000440118 M0R1B8 84 aa17.48■□□□□ 0.39
SHROOM1-204ENST00000440118 SERPINB7O75635 380 aa17.48■□□□□ 0.39
SHROOM1-204ENST00000440118 CDH2P19022 906 aaPredicted RBP17.48■□□□□ 0.39
SHROOM1-204ENST00000440118 RGS8P57771 180 aaPredicted RBP17.48■□□□□ 0.39
SHROOM1-204ENST00000440118 IL1RL1Q01638 556 aa17.48■□□□□ 0.39
SHROOM1-204ENST00000440118 SLC22A25Q6T423 547 aa17.48■□□□□ 0.39
SHROOM1-204ENST00000440118 SEZ6L2Q6UXD5 910 aa17.48■□□□□ 0.39
SHROOM1-204ENST00000440118 Q71RC1 249 aaPredicted RBP17.48■□□□□ 0.39
SHROOM1-204ENST00000440118 ABHD12BQ7Z5M8 362 aaPredicted RBP17.48■□□□□ 0.39
SHROOM1-204ENST00000440118 POMGNT2Q8NAT1 580 aa17.48■□□□□ 0.39
SHROOM1-204ENST00000440118 STK35Q8TDR2 534 aa17.48■□□□□ 0.39
SHROOM1-204ENST00000440118 TMEM45BQ96B21 275 aa17.48■□□□□ 0.39
SHROOM1-204ENST00000440118 TRMT61AQ96FX7 289 aaKnown RBP17.48■□□□□ 0.39
SHROOM1-204ENST00000440118 SMR3AQ99954 134 aa17.48■□□□□ 0.39
SHROOM1-204ENST00000440118 SLCO5A1Q9H2Y9 848 aa17.48■□□□□ 0.39
SHROOM1-204ENST00000440118 SLC7A10Q9NS82 523 aa17.48■□□□□ 0.39
SHROOM1-204ENST00000440118 NPAP1Q9NZP6 1156 aa17.48■□□□□ 0.39
SHROOM1-204ENST00000440118 NDUFAF1Q9Y375 327 aa17.48■□□□□ 0.39
SHROOM1-204ENST00000440118 NIPBLQ6KC79 2804 aaeCLIP17.47■□□□□ 0.39
SHROOM1-204ENST00000440118 TRIM64A6NGJ6 449 aa17.47■□□□□ 0.39
SHROOM1-204ENST00000440118 TRIM64BA6NI03 449 aa17.47■□□□□ 0.39
SHROOM1-204ENST00000440118 TMEM229AB2RXF0 380 aa17.47■□□□□ 0.39
SHROOM1-204ENST00000440118 VAMP5O95183 116 aa17.47■□□□□ 0.39
SHROOM1-204ENST00000440118 ITGA5P08648 1049 aa17.47■□□□□ 0.39
SHROOM1-204ENST00000440118 NTF4P34130 210 aa17.47■□□□□ 0.39
SHROOM1-204ENST00000440118 RPS5P46782 204 aaKnown RBP17.47■□□□□ 0.39
SHROOM1-204ENST00000440118 TSPO2Q5TGU0 170 aa17.47■□□□□ 0.39
SHROOM1-204ENST00000440118 ARMC8Q8IUR7 673 aa17.47■□□□□ 0.39
SHROOM1-204ENST00000440118 DEPDC4Q8N2C3 294 aa17.47■□□□□ 0.39
SHROOM1-204ENST00000440118 HIPK4Q8NE63 616 aa17.47■□□□□ 0.39
SHROOM1-204ENST00000440118 BHLHE22Q8NFJ8 381 aaPredicted RBP17.47■□□□□ 0.39
SHROOM1-204ENST00000440118 STON2Q8WXE9 905 aa17.47■□□□□ 0.39
SHROOM1-204ENST00000440118 RADILQ96JH8 1075 aa17.47■□□□□ 0.39
SHROOM1-204ENST00000440118 TRIM2Q9C040 744 aa17.47■□□□□ 0.39
SHROOM1-204ENST00000440118 IKZF5Q9H5V7 419 aa17.47■□□□□ 0.39
SHROOM1-204ENST00000440118 TMEM38AQ9H6F2 299 aa17.47■□□□□ 0.39
SHROOM1-204ENST00000440118 CISD1Q9NZ45 108 aaKnown RBP17.47■□□□□ 0.39
SHROOM1-204ENST00000440118 TESQ9UGI8 421 aaKnown RBP17.47■□□□□ 0.39
SHROOM1-204ENST00000440118 MGAT4BQ9UQ53 548 aa17.47■□□□□ 0.39
SHROOM1-204ENST00000440118 RASD1Q9Y272 281 aa17.47■□□□□ 0.39
SHROOM1-204ENST00000440118 MAGED1Q9Y5V3 778 aaPredicted RBP17.47■□□□□ 0.39
SHROOM1-204ENST00000440118 EDF1O60869 148 aaKnown RBP17.46■□□□□ 0.39
SHROOM1-204ENST00000440118 SOD3P08294 240 aa17.46■□□□□ 0.39
SHROOM1-204ENST00000440118 PTAFRP25105 342 aa17.46■□□□□ 0.39
SHROOM1-204ENST00000440118 NFYCQ13952 458 aa17.46■□□□□ 0.39
SHROOM1-204ENST00000440118 GABRA6Q16445 453 aa17.46■□□□□ 0.39
SHROOM1-204ENST00000440118 ALG10BQ5I7T1 473 aa17.46■□□□□ 0.39
SHROOM1-204ENST00000440118 DHRS4L2Q6PKH6 230 aa17.46■□□□□ 0.39
SHROOM1-204ENST00000440118 RANBP3LQ86VV4 465 aaPredicted RBP17.46■□□□□ 0.39
SHROOM1-204ENST00000440118 C10orf111Q8N326 155 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms