RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 TMEM151BQ8IW70 566 aa12.99□□□□□ -0.33
LIMD1-202ENST00000440097 BCORP1Q8N888 145 aa12.99□□□□□ -0.33
LIMD1-202ENST00000440097 PIGKQ92643 395 aa12.99□□□□□ -0.33
LIMD1-202ENST00000440097 PMM1Q92871 262 aa12.99□□□□□ -0.33
LIMD1-202ENST00000440097 BPIFA2Q96DR5 249 aa12.99□□□□□ -0.33
LIMD1-202ENST00000440097 LMF1Q96S06 567 aa12.99□□□□□ -0.33
LIMD1-202ENST00000440097 OR52D1Q9H346 318 aa12.99□□□□□ -0.33
LIMD1-202ENST00000440097 ZNF304Q9HCX3 659 aa12.99□□□□□ -0.33
LIMD1-202ENST00000440097 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.99□□□□□ -0.33
LIMD1-202ENST00000440097 SIDT1Q9NXL6 827 aaKnown RBP12.99□□□□□ -0.33
LIMD1-202ENST00000440097 PRODH2Q9UF12 536 aa12.99□□□□□ -0.33
LIMD1-202ENST00000440097 A0A1B0GWA3 101 aa12.98□□□□□ -0.33
LIMD1-202ENST00000440097 SHISA3A0PJX4 238 aa12.98□□□□□ -0.33
LIMD1-202ENST00000440097 FAM183AA6NL82 134 aa12.98□□□□□ -0.33
LIMD1-202ENST00000440097 PRODHO43272 600 aa12.98□□□□□ -0.33
LIMD1-202ENST00000440097 SLC2A10O95528 541 aa12.98□□□□□ -0.33
LIMD1-202ENST00000440097 HK1P19367 917 aa12.98□□□□□ -0.33
LIMD1-202ENST00000440097 DRD5P21918 477 aa12.98□□□□□ -0.33
LIMD1-202ENST00000440097 CDH11P55287 796 aa12.98□□□□□ -0.33
LIMD1-202ENST00000440097 NSDHLQ15738 373 aa12.98□□□□□ -0.33
LIMD1-202ENST00000440097 AANATQ16613 207 aa12.98□□□□□ -0.33
LIMD1-202ENST00000440097 PGGHGQ32M88 737 aa12.98□□□□□ -0.33
LIMD1-202ENST00000440097 C3orf38Q5JPI3 329 aa12.98□□□□□ -0.33
LIMD1-202ENST00000440097 BICRALQ6AI39 1079 aa12.98□□□□□ -0.33
LIMD1-202ENST00000440097 SHISA6Q6ZSJ9 500 aa12.98□□□□□ -0.33
LIMD1-202ENST00000440097 ZNF321PQ8N8H1 164 aa12.98□□□□□ -0.33
LIMD1-202ENST00000440097 OR11H7Q8NGC8 314 aa12.98□□□□□ -0.33
LIMD1-202ENST00000440097 OR51A7Q8NH64 312 aa12.98□□□□□ -0.33
LIMD1-202ENST00000440097 ZNF578Q96N58 590 aaPredicted RBP12.98□□□□□ -0.33
LIMD1-202ENST00000440097 PELOQ9BRX2 385 aaKnown RBP12.98□□□□□ -0.33
LIMD1-202ENST00000440097 LANCL1O43813 399 aa12.98□□□□□ -0.33
LIMD1-202ENST00000440097 PAHP00439 452 aa12.98□□□□□ -0.33
LIMD1-202ENST00000440097 MAKP20794 623 aa12.98□□□□□ -0.33
LIMD1-202ENST00000440097 FGF9P31371 208 aaPredicted RBP12.98□□□□□ -0.33
LIMD1-202ENST00000440097 GAS1P54826 345 aa12.98□□□□□ -0.33
LIMD1-202ENST00000440097 BTG1P62324 171 aa12.98□□□□□ -0.33
LIMD1-202ENST00000440097 CSTF1Q05048 431 aaKnown RBP12.98□□□□□ -0.33
LIMD1-202ENST00000440097 FUT7Q11130 342 aa12.98□□□□□ -0.33
LIMD1-202ENST00000440097 RIN1Q13671 783 aa12.98□□□□□ -0.33
LIMD1-202ENST00000440097 INSL4Q14641 139 aa12.98□□□□□ -0.33
LIMD1-202ENST00000440097 DTX3Q8N9I9 347 aa12.98□□□□□ -0.33
LIMD1-202ENST00000440097 TMED9Q9BVK6 235 aa12.98□□□□□ -0.33
LIMD1-202ENST00000440097 DPCDQ9BVM2 203 aaPredicted RBP12.98□□□□□ -0.33
LIMD1-202ENST00000440097 ERVMER34-1Q9H9K5 563 aa12.98□□□□□ -0.33
LIMD1-202ENST00000440097 DNAJB12Q9NXW2 375 aaKnown RBP12.98□□□□□ -0.33
LIMD1-202ENST00000440097 TRAV27A0A087WT01 109 aa12.98□□□□□ -0.33
LIMD1-202ENST00000440097 HYAL3O43820 417 aaPredicted RBP12.98□□□□□ -0.33
LIMD1-202ENST00000440097 FMO6PO60774 539 aa12.98□□□□□ -0.33
LIMD1-202ENST00000440097 ADAM11O75078 769 aa12.98□□□□□ -0.33
LIMD1-202ENST00000440097 GIMD1P0DJR0 217 aa12.98□□□□□ -0.33
LIMD1-202ENST00000440097 PTBP1P26599 531 aaKnown RBP eCLIP12.98□□□□□ -0.33
LIMD1-202ENST00000440097 SLC6A1P30531 599 aa12.98□□□□□ -0.33
LIMD1-202ENST00000440097 SLC16A1P53985 500 aa12.98□□□□□ -0.33
LIMD1-202ENST00000440097 ATP12AP54707 1039 aa12.98□□□□□ -0.33
LIMD1-202ENST00000440097 PLAURQ03405 335 aa12.98□□□□□ -0.33
LIMD1-202ENST00000440097 FGFBP1Q14512 234 aa12.98□□□□□ -0.33
LIMD1-202ENST00000440097 ZNF613Q6PF04 617 aa12.98□□□□□ -0.33
LIMD1-202ENST00000440097 MED25Q71SY5 747 aa12.98□□□□□ -0.33
LIMD1-202ENST00000440097 D2HGDHQ8N465 521 aa12.98□□□□□ -0.33
LIMD1-202ENST00000440097 OR13C2Q8NGS9 318 aa12.98□□□□□ -0.33
LIMD1-202ENST00000440097 RFKQ969G6 155 aa12.98□□□□□ -0.33
LIMD1-202ENST00000440097 IFT27Q9BW83 186 aa12.98□□□□□ -0.33
LIMD1-202ENST00000440097 CHRNA10Q9GZZ6 450 aa12.98□□□□□ -0.33
LIMD1-202ENST00000440097 RANBP3Q9H6Z4 567 aaPredicted RBP12.98□□□□□ -0.33
LIMD1-202ENST00000440097 LANCL2Q9NS86 450 aa12.98□□□□□ -0.33
LIMD1-202ENST00000440097 SLCO1C1Q9NYB5 712 aa12.98□□□□□ -0.33
LIMD1-202ENST00000440097 MRPL39Q9NYK5 338 aaKnown RBP12.98□□□□□ -0.33
LIMD1-202ENST00000440097 MKL2Q9ULH7 1088 aa12.98□□□□□ -0.33
LIMD1-202ENST00000440097 TRAV6A0A075B6T7 132 aa12.97□□□□□ -0.33
LIMD1-202ENST00000440097 RPS10-NUDT3A0A1W2PQS6 291 aa12.97□□□□□ -0.33
LIMD1-202ENST00000440097 CDC14CA4D256 554 aa12.97□□□□□ -0.33
LIMD1-202ENST00000440097 SURF4O15260 269 aa12.97□□□□□ -0.33
LIMD1-202ENST00000440097 SNTA1Q13424 505 aa12.97□□□□□ -0.33
LIMD1-202ENST00000440097 B3GLCTQ6Y288 498 aa12.97□□□□□ -0.33
LIMD1-202ENST00000440097 MARCH9Q86YJ5 346 aa12.97□□□□□ -0.33
LIMD1-202ENST00000440097 PRR22Q8IZ63 422 aa12.97□□□□□ -0.33
LIMD1-202ENST00000440097 RNF113BQ8IZP6 322 aaKnown RBP12.97□□□□□ -0.33
LIMD1-202ENST00000440097 ZNF615Q8N8J6 731 aa12.97□□□□□ -0.33
LIMD1-202ENST00000440097 POGLUT1Q8NBL1 392 aa12.97□□□□□ -0.33
LIMD1-202ENST00000440097 PTPMT1Q8WUK0 201 aaPredicted RBP12.97□□□□□ -0.33
LIMD1-202ENST00000440097 MVB12AQ96EY5 273 aa12.97□□□□□ -0.33
LIMD1-202ENST00000440097 HS6ST2Q96MM7 605 aa12.97□□□□□ -0.33
LIMD1-202ENST00000440097 AIFM2Q9BRQ8 373 aa12.97□□□□□ -0.33
LIMD1-202ENST00000440097 TRIM2Q9C040 744 aa12.97□□□□□ -0.33
LIMD1-202ENST00000440097 UBQLN3Q9H347 655 aa12.97□□□□□ -0.33
LIMD1-202ENST00000440097 FLRT3Q9NZU0 649 aa12.97□□□□□ -0.33
LIMD1-202ENST00000440097 CACNA1HO95180 2353 aa12.97□□□□□ -0.33
LIMD1-202ENST00000440097 TP53BP1Q12888 1972 aaPredicted RBP12.97□□□□□ -0.33
LIMD1-202ENST00000440097 TRDV1A0A1B0GX56 115 aa12.97□□□□□ -0.33
LIMD1-202ENST00000440097 TMEM129A0AVI4 362 aa12.97□□□□□ -0.33
LIMD1-202ENST00000440097 TSPAN4O14817 238 aa12.97□□□□□ -0.33
LIMD1-202ENST00000440097 GMFGO60234 142 aa12.97□□□□□ -0.33
LIMD1-202ENST00000440097 LALBAP00709 142 aa12.97□□□□□ -0.33
LIMD1-202ENST00000440097 ELK1P19419 428 aa12.97□□□□□ -0.33
LIMD1-202ENST00000440097 STOMP27105 288 aa12.97□□□□□ -0.33
LIMD1-202ENST00000440097 NOS3P29474 1203 aa12.97□□□□□ -0.33
LIMD1-202ENST00000440097 TALDO1P37837 337 aa12.97□□□□□ -0.33
LIMD1-202ENST00000440097 CRYZQ08257 329 aaKnown RBP12.97□□□□□ -0.33
LIMD1-202ENST00000440097 SHBQ15464 509 aa12.97□□□□□ -0.33
LIMD1-202ENST00000440097 PLA1AQ53H76 456 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 126.1 ms