RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 ACTC1P68032 377 aa12.42□□□□□ -0.42
HERPUD1-204ENST00000439977 ACTA1P68133 377 aa12.42□□□□□ -0.42
HERPUD1-204ENST00000439977 CAMK2BQ13554 666 aa12.42□□□□□ -0.42
HERPUD1-204ENST00000439977 ULK3Q6PHR2 472 aa12.42□□□□□ -0.42
HERPUD1-204ENST00000439977 ELSPBP1Q96BH3 223 aa12.42□□□□□ -0.42
HERPUD1-204ENST00000439977 SGTBQ96EQ0 304 aa12.42□□□□□ -0.42
HERPUD1-204ENST00000439977 SCMH1Q96GD3 660 aa12.42□□□□□ -0.42
HERPUD1-204ENST00000439977 Q96M85 177 aa12.42□□□□□ -0.42
HERPUD1-204ENST00000439977 TRIM2Q9C040 744 aa12.42□□□□□ -0.42
HERPUD1-204ENST00000439977 NCDNQ9UBB6 729 aa12.42□□□□□ -0.42
HERPUD1-204ENST00000439977 KLK11Q9UBX7 282 aa12.42□□□□□ -0.42
HERPUD1-204ENST00000439977 ING4Q9UNL4 249 aa12.42□□□□□ -0.42
HERPUD1-204ENST00000439977 ERVK-19Q9WJR5 959 aa12.42□□□□□ -0.42
HERPUD1-204ENST00000439977 RCE1Q9Y256 329 aa12.42□□□□□ -0.42
HERPUD1-204ENST00000439977 A0A0J9YY10 115 aa12.41□□□□□ -0.42
HERPUD1-204ENST00000439977 UBL3O95164 117 aa12.41□□□□□ -0.42
HERPUD1-204ENST00000439977 F13BP05160 661 aa12.41□□□□□ -0.42
HERPUD1-204ENST00000439977 SLC35E2P0CK97 266 aa12.41□□□□□ -0.42
HERPUD1-204ENST00000439977 GDNFP39905 211 aa12.41□□□□□ -0.42
HERPUD1-204ENST00000439977 BTG1P62324 171 aa12.41□□□□□ -0.42
HERPUD1-204ENST00000439977 POMZP3Q6PJE2 187 aa12.41□□□□□ -0.42
HERPUD1-204ENST00000439977 FCRLAQ7L513 359 aa12.41□□□□□ -0.42
HERPUD1-204ENST00000439977 OR8H3Q8N146 312 aa12.41□□□□□ -0.42
HERPUD1-204ENST00000439977 DNAAF1Q8NEP3 725 aa12.41□□□□□ -0.42
HERPUD1-204ENST00000439977 RPLP0P6Q8NHW5 317 aa12.41□□□□□ -0.42
HERPUD1-204ENST00000439977 KLHDC3Q9BQ90 382 aa12.41□□□□□ -0.42
HERPUD1-204ENST00000439977 ZNF426Q9BUY5 554 aa12.41□□□□□ -0.42
HERPUD1-204ENST00000439977 CHIAQ9BZP6 476 aa12.41□□□□□ -0.42
HERPUD1-204ENST00000439977 SRA1Q9HD15 236 aaKnown RBP12.41□□□□□ -0.42
HERPUD1-204ENST00000439977 MKKSQ9NPJ1 570 aaPredicted RBP12.41□□□□□ -0.42
HERPUD1-204ENST00000439977 C14orf105Q9NVL8 296 aa12.41□□□□□ -0.42
HERPUD1-204ENST00000439977 NPFFR2Q9Y5X5 522 aa12.41□□□□□ -0.42
HERPUD1-204ENST00000439977 WDFY3Q8IZQ1 3526 aa12.41□□□□□ -0.42
HERPUD1-204ENST00000439977 BRWD1Q9NSI6 2320 aa12.41□□□□□ -0.42
HERPUD1-204ENST00000439977 A0A1W2PQ72 361 aa12.41□□□□□ -0.42
HERPUD1-204ENST00000439977 B4DGG1 531 aa12.41□□□□□ -0.42
HERPUD1-204ENST00000439977 APBB3O95704 486 aa12.41□□□□□ -0.42
HERPUD1-204ENST00000439977 IFNA16P05015 189 aa12.41□□□□□ -0.42
HERPUD1-204ENST00000439977 OR2T7P0C7T2 308 aa12.41□□□□□ -0.42
HERPUD1-204ENST00000439977 SPI1P17947 270 aa12.41□□□□□ -0.42
HERPUD1-204ENST00000439977 SRMP19623 302 aa12.41□□□□□ -0.42
HERPUD1-204ENST00000439977 AQP2P41181 271 aa12.41□□□□□ -0.42
HERPUD1-204ENST00000439977 OR3A3P47888 321 aa12.41□□□□□ -0.42
HERPUD1-204ENST00000439977 RPS15P62841 145 aaKnown RBP12.41□□□□□ -0.42
HERPUD1-204ENST00000439977 TRAM1Q15629 374 aa12.41□□□□□ -0.42
HERPUD1-204ENST00000439977 LEG1Q6P5S2 330 aa12.41□□□□□ -0.42
HERPUD1-204ENST00000439977 CREB3L2Q70SY1 520 aa12.41□□□□□ -0.42
HERPUD1-204ENST00000439977 NPEPL1Q8NDH3 523 aa12.41□□□□□ -0.42
HERPUD1-204ENST00000439977 OR2T27Q8NH04 317 aa12.41□□□□□ -0.42
HERPUD1-204ENST00000439977 OR8K3Q8NH51 312 aa12.41□□□□□ -0.42
HERPUD1-204ENST00000439977 NKX3-1Q99801 234 aaPredicted RBP12.41□□□□□ -0.42
HERPUD1-204ENST00000439977 MTIF3Q9H2K0 278 aaKnown RBP12.41□□□□□ -0.42
HERPUD1-204ENST00000439977 HAO2Q9NYQ3 351 aa12.41□□□□□ -0.42
HERPUD1-204ENST00000439977 ENTPD2Q9Y5L3 495 aa12.41□□□□□ -0.42
HERPUD1-204ENST00000439977 TCRBV21S2A2A0A5A6 115 aa12.41□□□□□ -0.42
HERPUD1-204ENST00000439977 C17orf51A8MQB3 221 aa12.41□□□□□ -0.42
HERPUD1-204ENST00000439977 ARL6IP5O75915 188 aa12.41□□□□□ -0.42
HERPUD1-204ENST00000439977 ZFPL1O95159 310 aa12.41□□□□□ -0.42
HERPUD1-204ENST00000439977 GPANK1O95872 356 aa12.41□□□□□ -0.42
HERPUD1-204ENST00000439977 H2AFB2P0C5Z0 115 aa12.41□□□□□ -0.42
HERPUD1-204ENST00000439977 OR8G3PP0DMU2 310 aa12.41□□□□□ -0.42
HERPUD1-204ENST00000439977 FGFBP1Q14512 234 aa12.41□□□□□ -0.42
HERPUD1-204ENST00000439977 ZCCHC12Q6PEW1 402 aa12.41□□□□□ -0.42
HERPUD1-204ENST00000439977 KANSL1Q7Z3B3 1105 aa12.41□□□□□ -0.42
HERPUD1-204ENST00000439977 PIAS4Q8N2W9 510 aaPredicted RBP12.41□□□□□ -0.42
HERPUD1-204ENST00000439977 FAM131CQ96AQ9 280 aa12.41□□□□□ -0.42
HERPUD1-204ENST00000439977 GFI1Q99684 422 aa12.41□□□□□ -0.42
HERPUD1-204ENST00000439977 SPRTNQ9H040 489 aaPredicted RBP12.41□□□□□ -0.42
HERPUD1-204ENST00000439977 OR10A4Q9H209 315 aa12.41□□□□□ -0.42
HERPUD1-204ENST00000439977 ANKRD10Q9NXR5 420 aa12.41□□□□□ -0.42
HERPUD1-204ENST00000439977 TDRD6O60522 2096 aaKnown RBP12.4□□□□□ -0.42
HERPUD1-204ENST00000439977 TVP23AA6NH52 213 aa12.4□□□□□ -0.42
HERPUD1-204ENST00000439977 TNFRSF10AO00220 468 aa12.4□□□□□ -0.42
HERPUD1-204ENST00000439977 OGG1O15527 345 aa12.4□□□□□ -0.42
HERPUD1-204ENST00000439977 NOS1APO75052 506 aaPredicted RBP12.4□□□□□ -0.42
HERPUD1-204ENST00000439977 AK1P00568 194 aa12.4□□□□□ -0.42
HERPUD1-204ENST00000439977 MAOBP27338 520 aa12.4□□□□□ -0.42
HERPUD1-204ENST00000439977 MMP15P51511 669 aa12.4□□□□□ -0.42
HERPUD1-204ENST00000439977 P2RX3P56373 397 aa12.4□□□□□ -0.42
HERPUD1-204ENST00000439977 HHEXQ03014 270 aa12.4□□□□□ -0.42
HERPUD1-204ENST00000439977 GSG1Q2KHT4 349 aa12.4□□□□□ -0.42
HERPUD1-204ENST00000439977 CBLN3Q6UW01 205 aa12.4□□□□□ -0.42
HERPUD1-204ENST00000439977 ZNF527Q8NB42 609 aa12.4□□□□□ -0.42
HERPUD1-204ENST00000439977 C16orf52Q8NHV5 167 aa12.4□□□□□ -0.42
HERPUD1-204ENST00000439977 ZNF524Q96C55 264 aa12.4□□□□□ -0.42
HERPUD1-204ENST00000439977 VSTM2LQ96N03 204 aa12.4□□□□□ -0.42
HERPUD1-204ENST00000439977 FOXN4Q96NZ1 517 aa12.4□□□□□ -0.42
HERPUD1-204ENST00000439977 SERTAD3Q9UJW9 196 aa12.4□□□□□ -0.42
HERPUD1-204ENST00000439977 ING1Q9UK53 422 aaPredicted RBP12.4□□□□□ -0.42
HERPUD1-204ENST00000439977 NUBP2Q9Y5Y2 271 aa12.4□□□□□ -0.42
HERPUD1-204ENST00000439977 TMEM72A0PK05 275 aa12.4□□□□□ -0.42
HERPUD1-204ENST00000439977 A8MUA0 341 aa12.4□□□□□ -0.42
HERPUD1-204ENST00000439977 UCHL1P09936 223 aa12.4□□□□□ -0.42
HERPUD1-204ENST00000439977 CT45A8P0DMV1 189 aa12.4□□□□□ -0.42
HERPUD1-204ENST00000439977 CT45A9P0DMV2 189 aa12.4□□□□□ -0.42
HERPUD1-204ENST00000439977 ANXA3P12429 323 aa12.4□□□□□ -0.42
HERPUD1-204ENST00000439977 CDKN2AP42771 156 aaKnown RBP12.4□□□□□ -0.42
HERPUD1-204ENST00000439977 RAB38P57729 211 aa12.4□□□□□ -0.42
HERPUD1-204ENST00000439977 SHHQ15465 462 aa12.4□□□□□ -0.42
HERPUD1-204ENST00000439977 CT45A2Q5DJT8 189 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms