RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 ZNF620Q6ZNG0 422 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 TMPRSS11FQ6ZWK6 438 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 RRM2BQ7LG56 351 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 C16orf62Q7Z3J2 963 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 TPRA1Q86W33 373 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 BPHLQ86WA6 291 aaPredicted RBP4.35□□□□□ -1.71
EDEM3-203ENST00000439962 PRR22Q8IZ63 422 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 SLC34A3Q8N130 599 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 ZNF619Q8N2I2 560 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 KLHL36Q8N4N3 616 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 TCEANCQ8N8B7 351 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 POC5Q8NA72 575 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 SIMC1Q8NDZ2 872 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 ANKK1Q8NFD2 765 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 OR4D11Q8NGI4 311 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 OR6T1Q8NGN1 323 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 CPT1CQ8TCG5 803 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 ADAMTS15Q8TE58 950 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 XAGE5Q8WWM1 108 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 FER1L6-AS2Q96M78 137 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 AGAP4Q96P64 663 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 OR5M11Q96RB7 305 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 SNX18Q96RF0 628 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 IL4I1Q96RQ9 567 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 SOSTQ9BQB4 213 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 ZNF559Q9BR84 538 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 ALOXE3Q9BYJ1 711 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 CHRNA10Q9GZZ6 450 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 SLC22A4Q9H015 551 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 KCNN2Q9H2S1 579 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 CDCP1Q9H5V8 836 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 ZNF552Q9H707 407 aaPredicted RBP4.35□□□□□ -1.71
EDEM3-203ENST00000439962 TXNL4BQ9NX01 149 aaKnown RBP4.35□□□□□ -1.71
EDEM3-203ENST00000439962 ZNF443Q9Y2A4 671 aaPredicted RBP4.35□□□□□ -1.71
EDEM3-203ENST00000439962 ATG4BQ9Y4P1 393 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 SLC22A7Q9Y694 548 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 CLCA3PQ9Y6N3 262 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 V9GYH0 126 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 MTORP42345 2549 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 PCSK5Q92824 1860 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 A0A087WUU8 490 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 LOC100506127A0A0U1RQW1 187 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 TRAPPC13A5PLN9 417 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 TERTO14746 1132 aaKnown RBP4.35□□□□□ -1.71
EDEM3-203ENST00000439962 SNPHO15079 494 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 PGRMC2O15173 223 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 OR10H2O60403 315 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 SNAPC5O75971 98 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 WDPCPO95876 746 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 TSPAN19P0C672 248 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 GNLYP22749 145 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 COL8A1P27658 744 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 TNFSF8P32971 234 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 DDOSTP39656 456 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 MTNR1BP49286 362 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 NUDT6P53370 316 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 CASP9P55211 416 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 LSM3P62310 102 aaKnown RBP4.35□□□□□ -1.71
EDEM3-203ENST00000439962 EEF1A1P68104 462 aaKnown RBP4.35□□□□□ -1.71
EDEM3-203ENST00000439962 HSF1Q00613 529 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 SNAPC1Q16533 368 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 PGGHGQ32M88 737 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 GPAT3Q53EU6 434 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 SLC6A19Q695T7 634 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 IL20RBQ6UXL0 311 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 FRRS1Q6ZNA5 592 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 NCCRP1Q6ZVX7 275 aaPredicted RBP4.35□□□□□ -1.71
EDEM3-203ENST00000439962 BTLAQ7Z6A9 289 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 LIX1LQ8IVB5 337 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 OR2T33Q8NG76 320 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 OR52P1PQ8NH57 321 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 SNRNP27Q8WVK2 155 aaKnown RBP4.35□□□□□ -1.71
EDEM3-203ENST00000439962 THAP4Q8WY91 577 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 RAB8BQ92930 207 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 NACC2Q96BF6 587 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 LRR1Q96L50 414 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 LPAR4Q99677 370 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 PELOQ9BRX2 385 aaKnown RBP4.35□□□□□ -1.71
EDEM3-203ENST00000439962 OR2B2Q9GZK3 357 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 SRRQ9GZT4 340 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 PRTFDC1Q9NRG1 225 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 KCMF1Q9P0J7 381 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 EML6Q6ZMW3 1958 aa4.34□□□□□ -1.71
EDEM3-203ENST00000439962 TRBV11-1A0A0K0K1C0 115 aa4.34□□□□□ -1.71
EDEM3-203ENST00000439962 SLC22A31A6NKX4 558 aa4.34□□□□□ -1.71
EDEM3-203ENST00000439962 TGFBR3LH3BV60 316 aa4.34□□□□□ -1.71
EDEM3-203ENST00000439962 BOLA2-SMG1P6H3BVE0 249 aa4.34□□□□□ -1.71
EDEM3-203ENST00000439962 STX11O75558 287 aa4.34□□□□□ -1.71
EDEM3-203ENST00000439962 NSA2O95478 260 aaKnown RBP4.34□□□□□ -1.71
EDEM3-203ENST00000439962 COX6A1P12074 109 aa4.34□□□□□ -1.71
EDEM3-203ENST00000439962 RNH1P13489 461 aaKnown RBP4.34□□□□□ -1.71
EDEM3-203ENST00000439962 CPMP14384 443 aa4.34□□□□□ -1.71
EDEM3-203ENST00000439962 NID1P14543 1247 aa4.34□□□□□ -1.71
EDEM3-203ENST00000439962 NR4A1P22736 598 aa4.34□□□□□ -1.71
EDEM3-203ENST00000439962 HLA-DMAP28067 261 aa4.34□□□□□ -1.71
EDEM3-203ENST00000439962 SLC1A3P43003 542 aa4.34□□□□□ -1.71
EDEM3-203ENST00000439962 EIF2B2P49770 351 aaKnown RBP4.34□□□□□ -1.71
EDEM3-203ENST00000439962 RRADP55042 308 aa4.34□□□□□ -1.71
EDEM3-203ENST00000439962 RAB25P57735 213 aa4.34□□□□□ -1.71
EDEM3-203ENST00000439962 RGS8P57771 180 aaPredicted RBP4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms