RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 A0A0G2JLM5 398 aa2.44□□□□□ -2.02
VPS41-207ENST00000439468 A0A0J9YXY3 114 aa2.44□□□□□ -2.02
VPS41-207ENST00000439468 TRDCB7Z8K6 153 aa2.44□□□□□ -2.02
VPS41-207ENST00000439468 FOXE1O00358 373 aaPredicted RBP2.44□□□□□ -2.02
VPS41-207ENST00000439468 DCTN6O00399 190 aa2.44□□□□□ -2.02
VPS41-207ENST00000439468 PFKFB2O60825 505 aa2.44□□□□□ -2.02
VPS41-207ENST00000439468 SURF6O75683 361 aaKnown RBP2.44□□□□□ -2.02
VPS41-207ENST00000439468 DIRAS1O95057 198 aa2.44□□□□□ -2.02
VPS41-207ENST00000439468 LGI1O95970 557 aa2.44□□□□□ -2.02
VPS41-207ENST00000439468 LALBAP00709 142 aa2.44□□□□□ -2.02
VPS41-207ENST00000439468 NPR2P20594 1047 aa2.44□□□□□ -2.02
VPS41-207ENST00000439468 FUT3P21217 361 aa2.44□□□□□ -2.02
VPS41-207ENST00000439468 HTR1FP30939 366 aa2.44□□□□□ -2.02
VPS41-207ENST00000439468 BTDP43251 543 aa2.44□□□□□ -2.02
VPS41-207ENST00000439468 RGRP47804 291 aa2.44□□□□□ -2.02
VPS41-207ENST00000439468 GSSP48637 474 aa2.44□□□□□ -2.02
VPS41-207ENST00000439468 SLC26A2P50443 739 aa2.44□□□□□ -2.02
VPS41-207ENST00000439468 CAV2P51636 162 aa2.44□□□□□ -2.02
VPS41-207ENST00000439468 LYZP61626 148 aa2.44□□□□□ -2.02
VPS41-207ENST00000439468 GNB2P62879 340 aa2.44□□□□□ -2.02
VPS41-207ENST00000439468 TGFBR3Q03167 851 aa2.44□□□□□ -2.02
VPS41-207ENST00000439468 FGL1Q08830 312 aa2.44□□□□□ -2.02
VPS41-207ENST00000439468 BCL7AQ4VC05 210 aa2.44□□□□□ -2.02
VPS41-207ENST00000439468 SCARA5Q6ZMJ2 495 aa2.44□□□□□ -2.02
VPS41-207ENST00000439468 IL34Q6ZMJ4 242 aa2.44□□□□□ -2.02
VPS41-207ENST00000439468 DHDDSQ86SQ9 333 aa2.44□□□□□ -2.02
VPS41-207ENST00000439468 PPP1R27Q86WC6 154 aa2.44□□□□□ -2.02
VPS41-207ENST00000439468 KRTAP11-1Q8IUC1 163 aa2.44□□□□□ -2.02
VPS41-207ENST00000439468 ZNF100Q8IYN0 542 aa2.44□□□□□ -2.02
VPS41-207ENST00000439468 ZNF679Q8IYX0 411 aa2.44□□□□□ -2.02
VPS41-207ENST00000439468 C6orf223Q8N319 242 aa2.44□□□□□ -2.02
VPS41-207ENST00000439468 ALLCQ8N6M5 410 aa2.44□□□□□ -2.02
VPS41-207ENST00000439468 EIF1ADQ8N9N8 165 aaKnown RBP2.44□□□□□ -2.02
VPS41-207ENST00000439468 ZNF740Q8NDX6 193 aa2.44□□□□□ -2.02
VPS41-207ENST00000439468 BBS1Q8NFJ9 593 aa2.44□□□□□ -2.02
VPS41-207ENST00000439468 OR52H1Q8NGJ2 320 aa2.44□□□□□ -2.02
VPS41-207ENST00000439468 C7orf33Q8WU49 177 aa2.44□□□□□ -2.02
VPS41-207ENST00000439468 ST8SIA1Q92185 356 aa2.44□□□□□ -2.02
VPS41-207ENST00000439468 PHYHIPLQ96FC7 376 aa2.44□□□□□ -2.02
VPS41-207ENST00000439468 MTMR9Q96QG7 549 aa2.44□□□□□ -2.02
VPS41-207ENST00000439468 RNF2Q99496 336 aa2.44□□□□□ -2.02
VPS41-207ENST00000439468 NICN1Q9BSH3 213 aa2.44□□□□□ -2.02
VPS41-207ENST00000439468 TMEM43Q9BTV4 400 aa2.44□□□□□ -2.02
VPS41-207ENST00000439468 RNF167Q9H6Y7 350 aa2.44□□□□□ -2.02
VPS41-207ENST00000439468 PDFQ9HBH1 243 aa2.44□□□□□ -2.02
VPS41-207ENST00000439468 MARCH5Q9NX47 278 aa2.44□□□□□ -2.02
VPS41-207ENST00000439468 CD274Q9NZQ7 290 aa2.44□□□□□ -2.02
VPS41-207ENST00000439468 CDH9Q9ULB4 789 aa2.44□□□□□ -2.02
VPS41-207ENST00000439468 PRPF19Q9UMS4 504 aaKnown RBP2.44□□□□□ -2.02
VPS41-207ENST00000439468 ZNF256Q9Y2P7 627 aaPredicted RBP2.44□□□□□ -2.02
VPS41-207ENST00000439468 IFT52Q9Y366 437 aa2.44□□□□□ -2.02
VPS41-207ENST00000439468 SLCO1B1Q9Y6L6 691 aa2.44□□□□□ -2.02
VPS41-207ENST00000439468 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.44□□□□□ -2.02
VPS41-207ENST00000439468 LRRC9Q6ZRR7 1453 aa2.44□□□□□ -2.02
VPS41-207ENST00000439468 GLI3P10071 1580 aa2.44□□□□□ -2.02
VPS41-207ENST00000439468 ABCC1P33527 1531 aa2.43□□□□□ -2.02
VPS41-207ENST00000439468 RLFQ13129 1914 aa2.43□□□□□ -2.02
VPS41-207ENST00000439468 IGKV6D-21A0A0A0MT36 114 aa2.43□□□□□ -2.02
VPS41-207ENST00000439468 A6NIZ1 184 aa2.43□□□□□ -2.02
VPS41-207ENST00000439468 GFYI3L273 518 aa2.43□□□□□ -2.02
VPS41-207ENST00000439468 ECI2O75521 394 aa2.43□□□□□ -2.02
VPS41-207ENST00000439468 RHOBTB1O94844 696 aa2.43□□□□□ -2.02
VPS41-207ENST00000439468 SUPT7LO94864 414 aa2.43□□□□□ -2.02
VPS41-207ENST00000439468 IGHG4P01861 327 aa2.43□□□□□ -2.02
VPS41-207ENST00000439468 CCDC130P13994 396 aa2.43□□□□□ -2.02
VPS41-207ENST00000439468 ANXA13P27216 316 aa2.43□□□□□ -2.02
VPS41-207ENST00000439468 NMT1P30419 496 aaKnown RBP2.43□□□□□ -2.02
VPS41-207ENST00000439468 GRIA1P42261 906 aa2.43□□□□□ -2.02
VPS41-207ENST00000439468 MAGEA8P43361 318 aa2.43□□□□□ -2.02
VPS41-207ENST00000439468 QARSP47897 775 aaKnown RBP2.43□□□□□ -2.02
VPS41-207ENST00000439468 TDO2P48775 406 aa2.43□□□□□ -2.02
VPS41-207ENST00000439468 APOC4P55056 127 aa2.43□□□□□ -2.02
VPS41-207ENST00000439468 RAP1BP61224 184 aa2.43□□□□□ -2.02
VPS41-207ENST00000439468 CSNK1G2P78368 415 aa2.43□□□□□ -2.02
VPS41-207ENST00000439468 CHRNB3Q05901 458 aa2.43□□□□□ -2.02
VPS41-207ENST00000439468 KLRB1Q12918 225 aa2.43□□□□□ -2.02
VPS41-207ENST00000439468 PLD1Q13393 1074 aa2.43□□□□□ -2.02
VPS41-207ENST00000439468 GANABQ14697 944 aaKnown RBP2.43□□□□□ -2.02
VPS41-207ENST00000439468 DUSP7Q16829 419 aa2.43□□□□□ -2.02
VPS41-207ENST00000439468 ZNF630Q2M218 657 aaPredicted RBP2.43□□□□□ -2.02
VPS41-207ENST00000439468 BEND3Q5T5X7 828 aa2.43□□□□□ -2.02
VPS41-207ENST00000439468 METTL11BQ5VVY1 283 aa2.43□□□□□ -2.02
VPS41-207ENST00000439468 RSBN1Q5VWQ0 802 aaPredicted RBP2.43□□□□□ -2.02
VPS41-207ENST00000439468 KDELC1Q6UW63 502 aa2.43□□□□□ -2.02
VPS41-207ENST00000439468 ARCQ7LC44 396 aa2.43□□□□□ -2.02
VPS41-207ENST00000439468 MFSD9Q8NBP5 474 aa2.43□□□□□ -2.02
VPS41-207ENST00000439468 OR4K14Q8NGD5 310 aa2.43□□□□□ -2.02
VPS41-207ENST00000439468 FBXO30Q8TB52 745 aa2.43□□□□□ -2.02
VPS41-207ENST00000439468 MAIP1Q8WWC4 291 aa2.43□□□□□ -2.02
VPS41-207ENST00000439468 B3GALT6Q96L58 329 aa2.43□□□□□ -2.02
VPS41-207ENST00000439468 RBM14Q96PK6 669 aaKnown RBP2.43□□□□□ -2.02
VPS41-207ENST00000439468 TSG101Q99816 390 aa2.43□□□□□ -2.02
VPS41-207ENST00000439468 CCT7Q99832 543 aa2.43□□□□□ -2.02
VPS41-207ENST00000439468 TUBGCP2Q9BSJ2 902 aa2.43□□□□□ -2.02
VPS41-207ENST00000439468 SMYD3Q9H7B4 428 aa2.43□□□□□ -2.02
VPS41-207ENST00000439468 TREM2Q9NZC2 230 aa2.43□□□□□ -2.02
VPS41-207ENST00000439468 KIF25Q9UIL4 384 aa2.43□□□□□ -2.02
VPS41-207ENST00000439468 PNPLA6Q8IY17 1366 aa2.43□□□□□ -2.02
VPS41-207ENST00000439468 RPAP1Q9BWH6 1393 aaPredicted RBP2.43□□□□□ -2.02
VPS41-207ENST00000439468 PLEKHH1Q9ULM0 1364 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms