RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 FN3KQ9H479 309 aa7.89□□□□□ -1.15
HPS4-206ENST00000439453 LHX9Q9NQ69 397 aa7.89□□□□□ -1.15
HPS4-206ENST00000439453 AK6Q9Y3D8 172 aaKnown RBP7.89□□□□□ -1.15
HPS4-206ENST00000439453 PI4KAP42356 2102 aa7.89□□□□□ -1.15
HPS4-206ENST00000439453 FXYD6-FXYD2A0A087WZ82 144 aa7.88□□□□□ -1.15
HPS4-206ENST00000439453 EDDM13A0A1B0GTR0 161 aa7.88□□□□□ -1.15
HPS4-206ENST00000439453 SNRPGP15A8MWD9 76 aa7.88□□□□□ -1.15
HPS4-206ENST00000439453 SPINT1O43278 529 aa7.88□□□□□ -1.15
HPS4-206ENST00000439453 KRT33AO76009 404 aa7.88□□□□□ -1.15
HPS4-206ENST00000439453 THY1P04216 161 aa7.88□□□□□ -1.15
HPS4-206ENST00000439453 IL5P05113 134 aa7.88□□□□□ -1.15
HPS4-206ENST00000439453 ZGLP1P0C6A0 271 aa7.88□□□□□ -1.15
HPS4-206ENST00000439453 PLA2G5P39877 138 aa7.88□□□□□ -1.15
HPS4-206ENST00000439453 NCBP2P52298 156 aaKnown RBP eCLIP7.88□□□□□ -1.156e-6■■□□□ 11.7
HPS4-206ENST00000439453 SLC16A1P53985 500 aa7.88□□□□□ -1.15
HPS4-206ENST00000439453 LINC00303Q3SY05 128 aa7.88□□□□□ -1.15
HPS4-206ENST00000439453 ZNF658BQ4V348 819 aaPredicted RBP7.88□□□□□ -1.15
HPS4-206ENST00000439453 ZNF660Q6AZW8 331 aaPredicted RBP7.88□□□□□ -1.15
HPS4-206ENST00000439453 LRRTM4Q86VH4 590 aa7.88□□□□□ -1.15
HPS4-206ENST00000439453 LSRQ86X29 649 aaPredicted RBP7.88□□□□□ -1.15
HPS4-206ENST00000439453 PNPLA2Q96AD5 504 aa7.88□□□□□ -1.15
HPS4-206ENST00000439453 FXYD6Q9H0Q3 95 aa7.88□□□□□ -1.15
HPS4-206ENST00000439453 RHBGQ9H310 441 aa7.88□□□□□ -1.15
HPS4-206ENST00000439453 POLMQ9NP87 494 aaPredicted RBP7.88□□□□□ -1.15
HPS4-206ENST00000439453 SLCO1B1Q9Y6L6 691 aa7.88□□□□□ -1.15
HPS4-206ENST00000439453 GABARAPH6UMI1 98 aa7.88□□□□□ -1.15
HPS4-206ENST00000439453 ZNF749O43361 778 aa7.88□□□□□ -1.15
HPS4-206ENST00000439453 SIGLEC6O43699 453 aa7.88□□□□□ -1.15
HPS4-206ENST00000439453 HMGN2P05204 90 aaKnown RBP7.88□□□□□ -1.15
HPS4-206ENST00000439453 PYCR1P32322 319 aa7.88□□□□□ -1.15
HPS4-206ENST00000439453 RGS8P57771 180 aaPredicted RBP7.88□□□□□ -1.15
HPS4-206ENST00000439453 ZNF85Q03923 595 aa7.88□□□□□ -1.15
HPS4-206ENST00000439453 LGALS3BPQ08380 585 aa7.88□□□□□ -1.15
HPS4-206ENST00000439453 MELKQ14680 651 aa7.88□□□□□ -1.15
HPS4-206ENST00000439453 C6orf132Q5T0Z8 1188 aa7.88□□□□□ -1.15
HPS4-206ENST00000439453 PMS2CLQ68D20 193 aa7.88□□□□□ -1.15
HPS4-206ENST00000439453 NUDT13Q86X67 352 aa7.88□□□□□ -1.15
HPS4-206ENST00000439453 PM20D2Q8IYS1 436 aa7.88□□□□□ -1.15
HPS4-206ENST00000439453 AMER3Q8N944 861 aa7.88□□□□□ -1.15
HPS4-206ENST00000439453 BRIX1Q8TDN6 353 aaKnown RBP7.88□□□□□ -1.15
HPS4-206ENST00000439453 SMAP2Q8WU79 429 aaPredicted RBP7.88□□□□□ -1.15
HPS4-206ENST00000439453 C16orf58Q96GQ5 468 aa7.88□□□□□ -1.15
HPS4-206ENST00000439453 SLC41A3Q96GZ6 507 aa7.88□□□□□ -1.15
HPS4-206ENST00000439453 ZNF764Q96H86 408 aaPredicted RBP7.88□□□□□ -1.15
HPS4-206ENST00000439453 OR1F2PQ96R84 312 aa7.88□□□□□ -1.15
HPS4-206ENST00000439453 MCHR1Q99705 422 aa7.88□□□□□ -1.15
HPS4-206ENST00000439453 KLHL9Q9P2J3 617 aa7.88□□□□□ -1.15
HPS4-206ENST00000439453 KLK11Q9UBX7 282 aa7.88□□□□□ -1.15
HPS4-206ENST00000439453 PLAGL1Q9UM63 463 aa7.88□□□□□ -1.15
HPS4-206ENST00000439453 PCDHGA5Q9Y5G8 931 aa7.88□□□□□ -1.15
HPS4-206ENST00000439453 ASPMQ8IZT6 3477 aa7.88□□□□□ -1.15
HPS4-206ENST00000439453 SERPINA3P01011 423 aa7.88□□□□□ -1.15
HPS4-206ENST00000439453 NT5EP21589 574 aa7.88□□□□□ -1.15
HPS4-206ENST00000439453 OLFML2AQ68BL7 652 aa7.88□□□□□ -1.15
HPS4-206ENST00000439453 LCTLQ6UWM7 567 aa7.88□□□□□ -1.15
HPS4-206ENST00000439453 ASB12Q8WXK4 309 aa7.88□□□□□ -1.15
HPS4-206ENST00000439453 C12orf57Q99622 126 aa7.88□□□□□ -1.15
HPS4-206ENST00000439453 GINS4Q9BRT9 223 aa7.88□□□□□ -1.15
HPS4-206ENST00000439453 C1QTNF2Q9BXJ5 285 aa7.88□□□□□ -1.15
HPS4-206ENST00000439453 OR51V1Q9H2C8 321 aa7.88□□□□□ -1.15
HPS4-206ENST00000439453 SLC38A1Q9H2H9 487 aa7.88□□□□□ -1.15
HPS4-206ENST00000439453 OR52D1Q9H346 318 aa7.88□□□□□ -1.15
HPS4-206ENST00000439453 OPN4Q9UHM6 478 aa7.88□□□□□ -1.15
HPS4-206ENST00000439453 KLF15Q9UIH9 416 aa7.88□□□□□ -1.15
HPS4-206ENST00000439453 A0A0G2JN53 185 aa7.87□□□□□ -1.15
HPS4-206ENST00000439453 UNC119BA6NIH7 251 aa7.87□□□□□ -1.15
HPS4-206ENST00000439453 AQP8O94778 261 aa7.87□□□□□ -1.15
HPS4-206ENST00000439453 PRG2P13727 222 aa7.87□□□□□ -1.15
HPS4-206ENST00000439453 DLX5P56178 289 aa7.87□□□□□ -1.15
HPS4-206ENST00000439453 TAS2R38P59533 333 aa7.87□□□□□ -1.15
HPS4-206ENST00000439453 MAT1AQ00266 395 aaKnown RBP7.87□□□□□ -1.15
HPS4-206ENST00000439453 PRAMEF8Q5VWM4 474 aa7.87□□□□□ -1.15
HPS4-206ENST00000439453 PRAMEF7Q5VXH5 474 aa7.87□□□□□ -1.15
HPS4-206ENST00000439453 PEAR1Q5VY43 1037 aaPredicted RBP7.87□□□□□ -1.15
HPS4-206ENST00000439453 HEPHL1Q6MZM0 1159 aa7.87□□□□□ -1.15
HPS4-206ENST00000439453 FAAP20Q6NZ36 180 aa7.87□□□□□ -1.15
HPS4-206ENST00000439453 OR52B4Q8NGK2 314 aa7.87□□□□□ -1.15
HPS4-206ENST00000439453 FCAMRQ8WWV6 532 aa7.87□□□□□ -1.15
HPS4-206ENST00000439453 CMTM3Q96MX0 182 aa7.87□□□□□ -1.15
HPS4-206ENST00000439453 BBS4Q96RK4 519 aa7.87□□□□□ -1.15
HPS4-206ENST00000439453 TEAD3Q99594 435 aa7.87□□□□□ -1.15
HPS4-206ENST00000439453 UTP23Q9BRU9 249 aaKnown RBP7.87□□□□□ -1.15
HPS4-206ENST00000439453 NKX6-2Q9C056 277 aaPredicted RBP7.87□□□□□ -1.15
HPS4-206ENST00000439453 SLC35C2Q9NQQ7 365 aa7.87□□□□□ -1.15
HPS4-206ENST00000439453 ST6GALNAC2Q9UJ37 374 aa7.87□□□□□ -1.15
HPS4-206ENST00000439453 SLC25A13Q9UJS0 675 aa7.87□□□□□ -1.15
HPS4-206ENST00000439453 PURGQ9UJV8 347 aaKnown RBP7.87□□□□□ -1.15
HPS4-206ENST00000439453 GPR179Q6PRD1 2367 aa7.87□□□□□ -1.15
HPS4-206ENST00000439453 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.87□□□□□ -1.15
HPS4-206ENST00000439453 FEZF1A0PJY2 475 aa7.87□□□□□ -1.15
HPS4-206ENST00000439453 SLC22A31A6NKX4 558 aa7.87□□□□□ -1.15
HPS4-206ENST00000439453 ARL6IP5O75915 188 aa7.87□□□□□ -1.15
HPS4-206ENST00000439453 IGF2P01344 180 aa7.87□□□□□ -1.15
HPS4-206ENST00000439453 SBK2P0C263 348 aa7.87□□□□□ -1.15
HPS4-206ENST00000439453 FGL1Q08830 312 aa7.87□□□□□ -1.15
HPS4-206ENST00000439453 OVCH1Q7RTY7 1134 aa7.87□□□□□ -1.15
HPS4-206ENST00000439453 CACUL1Q86Y37 369 aa7.87□□□□□ -1.15
HPS4-206ENST00000439453 HDDC3Q8N4P3 179 aa7.87□□□□□ -1.15
HPS4-206ENST00000439453 PXT1Q8NFP0 134 aa7.87□□□□□ -1.15
HPS4-206ENST00000439453 OR52L1Q8NGH7 329 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms