RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 PRSS38A1L453 326 aa9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 RDH16O75452 317 aa9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 RLN2P04090 185 aa9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 HPGDP15428 266 aa9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 PCSK2P16519 638 aa9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 C5AR1P21730 350 aa9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 NFYAP23511 347 aaPredicted RBP9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 HSD17B2P37059 387 aa9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 PCBP4P57723 403 aaKnown RBP9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 TNFRSF17Q02223 184 aa9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 ILF3Q12906 894 aaKnown RBP eCLIP9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 C2orf68Q2NKX9 166 aa9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 COL28A1Q2UY09 1125 aa9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 PUS10Q3MIT2 529 aaKnown RBP9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 HSD17B12Q53GQ0 312 aa9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 FIGLAQ6QHK4 219 aa9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 ADAMTSL4Q6UY14 1074 aa9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 KCTD9Q7L273 389 aa9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 LRRC25Q8N386 305 aaPredicted RBP9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 PEX11GQ96HA9 241 aa9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 PRRC1Q96M27 445 aa9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 AICDAQ9GZX7 198 aa9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 PRDM7Q9NQW5 492 aa9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 TRAV20A0A0B4J274 112 aa9.16□□□□□ -0.94
CDC42SE1-202ENST00000439374 UBE2QL1A1L167 161 aa9.16□□□□□ -0.94
CDC42SE1-202ENST00000439374 CARNS1A5YM72 827 aa9.16□□□□□ -0.94
CDC42SE1-202ENST00000439374 TMEM200CA6NKL6 621 aa9.16□□□□□ -0.94
CDC42SE1-202ENST00000439374 SLC19A2O60779 497 aa9.16□□□□□ -0.94
CDC42SE1-202ENST00000439374 CAPZA2P47755 286 aa9.16□□□□□ -0.94
CDC42SE1-202ENST00000439374 RBM39Q14498 530 aaKnown RBP9.16□□□□□ -0.94
CDC42SE1-202ENST00000439374 OR7A5Q15622 319 aa9.16□□□□□ -0.94
CDC42SE1-202ENST00000439374 HBMQ6B0K9 141 aa9.16□□□□□ -0.94
CDC42SE1-202ENST00000439374 HAGHLQ6PII5 290 aaPredicted RBP9.16□□□□□ -0.94
CDC42SE1-202ENST00000439374 SEZ6L2Q6UXD5 910 aa9.16□□□□□ -0.94
CDC42SE1-202ENST00000439374 SLC16A13Q7RTY0 426 aa9.16□□□□□ -0.94
CDC42SE1-202ENST00000439374 CMTM4Q8IZR5 234 aa9.16□□□□□ -0.94
CDC42SE1-202ENST00000439374 OR10K1Q8NGX5 313 aa9.16□□□□□ -0.94
CDC42SE1-202ENST00000439374 OR56B4Q8NH76 319 aa9.16□□□□□ -0.94
CDC42SE1-202ENST00000439374 YIPF5Q969M3 257 aa9.16□□□□□ -0.94
CDC42SE1-202ENST00000439374 HHIPQ96QV1 700 aa9.16□□□□□ -0.94
CDC42SE1-202ENST00000439374 TPSD1Q9BZJ3 242 aa9.16□□□□□ -0.94
CDC42SE1-202ENST00000439374 UBQLN3Q9H347 655 aa9.16□□□□□ -0.94
CDC42SE1-202ENST00000439374 WASH6PQ9NQA3 447 aa9.16□□□□□ -0.94
CDC42SE1-202ENST00000439374 MAN2C1Q9NTJ4 1040 aa9.16□□□□□ -0.94
CDC42SE1-202ENST00000439374 FBXO4Q9UKT5 387 aa9.16□□□□□ -0.94
CDC42SE1-202ENST00000439374 ADAM18Q9Y3Q7 739 aa9.16□□□□□ -0.94
CDC42SE1-202ENST00000439374 TEX51A0A1B0GUA7 166 aa9.16□□□□□ -0.94
CDC42SE1-202ENST00000439374 C13orf42A0A1B0GVH6 325 aa9.16□□□□□ -0.94
CDC42SE1-202ENST00000439374 H7C2Y5 167 aa9.16□□□□□ -0.94
CDC42SE1-202ENST00000439374 LGI1O95970 557 aa9.16□□□□□ -0.94
CDC42SE1-202ENST00000439374 LINC00271P0C7V0 271 aa9.16□□□□□ -0.94
CDC42SE1-202ENST00000439374 PIPP12273 146 aaPredicted RBP9.16□□□□□ -0.94
CDC42SE1-202ENST00000439374 NDUFV2P19404 249 aa9.16□□□□□ -0.94
CDC42SE1-202ENST00000439374 TEAD1P28347 426 aa9.16□□□□□ -0.94
CDC42SE1-202ENST00000439374 BTCP35070 178 aa9.16□□□□□ -0.94
CDC42SE1-202ENST00000439374 PGGHGQ32M88 737 aa9.16□□□□□ -0.94
CDC42SE1-202ENST00000439374 TMEM196Q5HYL7 178 aa9.16□□□□□ -0.94
CDC42SE1-202ENST00000439374 RAB12Q6IQ22 244 aa9.16□□□□□ -0.94
CDC42SE1-202ENST00000439374 C19orf48Q6RUI8 117 aa9.16□□□□□ -0.94
CDC42SE1-202ENST00000439374 THSD4Q6ZMP0 1018 aa9.16□□□□□ -0.94
CDC42SE1-202ENST00000439374 CMIPQ8IY22 773 aa9.16□□□□□ -0.94
CDC42SE1-202ENST00000439374 OR9A4Q8NGU2 314 aa9.16□□□□□ -0.94
CDC42SE1-202ENST00000439374 SLC25A28Q96A46 364 aa9.16□□□□□ -0.94
CDC42SE1-202ENST00000439374 RBM18Q96H35 190 aaKnown RBP9.16□□□□□ -0.94
CDC42SE1-202ENST00000439374 GPR137Q96N19 417 aa9.16□□□□□ -0.94
CDC42SE1-202ENST00000439374 ZNF75AQ96N20 296 aa9.16□□□□□ -0.94
CDC42SE1-202ENST00000439374 MFFQ9GZY8 342 aa9.16□□□□□ -0.94
CDC42SE1-202ENST00000439374 SLC38A1Q9H2H9 487 aa9.16□□□□□ -0.94
CDC42SE1-202ENST00000439374 TREM1Q9NP99 234 aa9.16□□□□□ -0.94
CDC42SE1-202ENST00000439374 C14orf105Q9NVL8 296 aa9.16□□□□□ -0.94
CDC42SE1-202ENST00000439374 ZNF230Q9UIE0 474 aaPredicted RBP9.16□□□□□ -0.94
CDC42SE1-202ENST00000439374 SCP2D1Q9UJQ7 156 aa9.16□□□□□ -0.94
CDC42SE1-202ENST00000439374 CYP8B1Q9UNU6 501 aa9.16□□□□□ -0.94
CDC42SE1-202ENST00000439374 NUBP2Q9Y5Y2 271 aa9.16□□□□□ -0.94
CDC42SE1-202ENST00000439374 SNRNP200O75643 2136 aaKnown RBP9.16□□□□□ -0.94
CDC42SE1-202ENST00000439374 A0A0A6YYC8 382 aaPredicted RBP9.15□□□□□ -0.94
CDC42SE1-202ENST00000439374 TVP23AA6NH52 213 aa9.15□□□□□ -0.94
CDC42SE1-202ENST00000439374 I3L1I5 382 aaPredicted RBP9.15□□□□□ -0.94
CDC42SE1-202ENST00000439374 P2RX6O15547 441 aa9.15□□□□□ -0.94
CDC42SE1-202ENST00000439374 CTSVO60911 334 aa9.15□□□□□ -0.94
CDC42SE1-202ENST00000439374 PEX14O75381 377 aa9.15□□□□□ -0.94
CDC42SE1-202ENST00000439374 MT-ND5P03915 603 aa9.15□□□□□ -0.94
CDC42SE1-202ENST00000439374 NTSR1P30989 418 aa9.15□□□□□ -0.94
CDC42SE1-202ENST00000439374 LUMP51884 338 aaPredicted RBP9.15□□□□□ -0.94
CDC42SE1-202ENST00000439374 RPS15P62841 145 aaKnown RBP9.15□□□□□ -0.94
CDC42SE1-202ENST00000439374 GPR18Q14330 331 aa9.15□□□□□ -0.94
CDC42SE1-202ENST00000439374 SHHQ15465 462 aa9.15□□□□□ -0.94
CDC42SE1-202ENST00000439374 PCGF3Q3KNV8 242 aa9.15□□□□□ -0.94
CDC42SE1-202ENST00000439374 EXOSC6Q5RKV6 272 aaKnown RBP9.15□□□□□ -0.94
CDC42SE1-202ENST00000439374 MRPL2Q5T653 305 aaKnown RBP9.15□□□□□ -0.94
CDC42SE1-202ENST00000439374 DCAF12L2Q5VW00 463 aa9.15□□□□□ -0.94
CDC42SE1-202ENST00000439374 TIGD3Q6B0B8 471 aa9.15□□□□□ -0.94
CDC42SE1-202ENST00000439374 PYHIN1Q6K0P9 492 aa9.15□□□□□ -0.94
CDC42SE1-202ENST00000439374 SLC48A1Q6P1K1 146 aa9.15□□□□□ -0.94
CDC42SE1-202ENST00000439374 ZNF627Q7L945 461 aa9.15□□□□□ -0.94
CDC42SE1-202ENST00000439374 OAFQ86UD1 273 aa9.15□□□□□ -0.94
CDC42SE1-202ENST00000439374 SLITRK4Q8IW52 837 aa9.15□□□□□ -0.94
CDC42SE1-202ENST00000439374 FAM160A2Q8N612 972 aaPredicted RBP9.15□□□□□ -0.94
CDC42SE1-202ENST00000439374 TTLQ8NG68 377 aa9.15□□□□□ -0.94
CDC42SE1-202ENST00000439374 OR4C6Q8NH72 309 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms