RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 PAX2Q02962 417 aa3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 ZP4Q12836 540 aa3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 MTF1Q14872 753 aa3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 ATXN7L3Q14CW9 347 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 GUK1Q16774 197 aa3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 ISXQ2M1V0 245 aa3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 RPEL1Q2QD12 228 aa3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 SLC36A2Q495M3 483 aa3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 FAM74A3Q4VXF1 159 aa3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 TIMM23BQ5SRD1 257 aa3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 DUPD1Q68J44 220 aa3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 C3orf33Q6P1S2 294 aa3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 NAPRTQ6XQN6 538 aa3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 TMEM64Q6YI46 380 aa3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 C17orf107Q6ZR85 190 aa3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 LANCL3Q6ZV70 420 aa3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 SMIM15Q7Z3B0 74 aa3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 NUFIP2Q7Z417 695 aaKnown RBP3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 BCDIN3DQ7Z5W3 292 aaKnown RBP3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 NET1Q7Z628 596 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 LGI2Q8N0V4 545 aa3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 PGAM4Q8N0Y7 254 aa3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 Q8N402 240 aa3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 ARL14EPQ8N8R7 260 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 PRR26Q8N8Z3 221 aa3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 NRACQ8N912 160 aa3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 LRRC57Q8N9N7 239 aa3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 RELL2Q8NC24 303 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 NOA1Q8NC60 698 aaKnown RBP3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 ZNF738Q8NE65 137 aa3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 OR2L5Q8NG80 312 aa3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 OR2AK2Q8NG84 335 aa3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 OR11H4Q8NGC9 324 aa3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 OR1B1Q8NGR6 318 aa3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 PLPPR1Q8TBJ4 325 aa3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 TMEM163Q8TC26 289 aa3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 CCDC107Q8WV48 283 aa3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 BAALCQ8WXS3 180 aa3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 AP3S1Q92572 193 aa3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 SLC35C1Q96A29 364 aa3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 RPEQ96AT9 228 aa3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 APH1AQ96BI3 265 aa3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 BPIFA2Q96DR5 249 aa3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 FBXO17Q96EF6 278 aa3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 CEP170P1Q96L14 293 aa3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 NSMCE3Q96MG7 304 aa3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 MCCC1Q96RQ3 725 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 RBBP8Q99708 897 aa3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 NEURL2Q9BR09 285 aa3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 VN1R1Q9GZP7 353 aa3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 LAT2Q9GZY6 243 aa3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 FAM107BQ9H098 131 aa3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 MMP28Q9H239 520 aa3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 CXXC4Q9H2H0 198 aa3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 ARRDC1-AS1Q9H2J1 176 aa3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 TLE6Q9H808 572 aa3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 POPDC2Q9HBU9 364 aa3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 POLD4Q9HCU8 107 aa3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 MLXIPLQ9NP71 852 aa3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 ASCL3Q9NQ33 180 aa3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 DUSP22Q9NRW4 184 aa3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 INIPQ9NRY2 104 aa3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 SERTAD4Q9NUC0 356 aa3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 EXD2Q9NVH0 621 aa3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 C1orf109Q9NX04 203 aa3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 MIOSQ9NXC5 875 aa3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 ENOPH1Q9UHY7 261 aa3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 FBXL2Q9UKC9 423 aa3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 NUP50Q9UKX7 468 aa3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 PPP1R3CQ9UQK1 317 aa3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 GINS2Q9Y248 185 aa3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 SLC6A5Q9Y345 797 aa3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 RAP2CQ9Y3L5 183 aa3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 ZNF337Q9Y3M9 751 aa3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 POLR3HQ9Y535 204 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 FKBP7Q9Y680 259 aa3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 COLEC10Q9Y6Z7 277 aa3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 ZFYVE9O95405 1425 aa3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 ADGRA3Q8IWK6 1321 aa3.18□□□□□ -1.9
HMGB1P12-201ENST00000438594 USP47Q96K76 1375 aa3.17□□□□□ -1.9
HMGB1P12-201ENST00000438594 ANKRD30BQ9BXX2 1392 aa3.17□□□□□ -1.9
HMGB1P12-201ENST00000438594 NSG1A0A0A6YYJ2 146 aa3.17□□□□□ -1.9
HMGB1P12-201ENST00000438594 NPIPA5A0A0B4J1W7 369 aa3.17□□□□□ -1.9
HMGB1P12-201ENST00000438594 TRBV7-9A0A0J9YWB2 115 aa3.17□□□□□ -1.9
HMGB1P12-201ENST00000438594 SLC22A20A6NK97 555 aa3.17□□□□□ -1.9
HMGB1P12-201ENST00000438594 VSTM2BA6NLU5 285 aa3.17□□□□□ -1.9
HMGB1P12-201ENST00000438594 NPIPA5E9PKD4 350 aa3.17□□□□□ -1.9
HMGB1P12-201ENST00000438594 BLOC1S5-TXNDC5H3BN57 136 aa3.17□□□□□ -1.9
HMGB1P12-201ENST00000438594 DYNC1I1O14576 645 aa3.17□□□□□ -1.9
HMGB1P12-201ENST00000438594 PPP1R2P9O14990 202 aa3.17□□□□□ -1.9
HMGB1P12-201ENST00000438594 KMOO15229 486 aa3.17□□□□□ -1.9
HMGB1P12-201ENST00000438594 MSH4O15457 936 aa3.17□□□□□ -1.9
HMGB1P12-201ENST00000438594 CFLARO15519 480 aa3.17□□□□□ -1.9
HMGB1P12-201ENST00000438594 NDUFA2O43678 99 aa3.17□□□□□ -1.9
HMGB1P12-201ENST00000438594 STX10O60499 249 aa3.17□□□□□ -1.9
HMGB1P12-201ENST00000438594 NXPH3O95157 252 aa3.17□□□□□ -1.9
HMGB1P12-201ENST00000438594 LRATO95237 230 aa3.17□□□□□ -1.9
HMGB1P12-201ENST00000438594 TNFAIP8O95379 198 aa3.17□□□□□ -1.9
HMGB1P12-201ENST00000438594 SYF2O95926 243 aaKnown RBP3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms