RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 ZNF37AP17032 561 aaPredicted RBP9.15□□□□□ -0.94
RTN4-211ENST00000438462 GABRB3P28472 473 aa9.15□□□□□ -0.94
RTN4-211ENST00000438462 VEGFCP49767 419 aa9.15□□□□□ -0.94
RTN4-211ENST00000438462 PHEXP78562 749 aa9.15□□□□□ -0.94
RTN4-211ENST00000438462 BASP1P80723 227 aaKnown RBP9.15□□□□□ -0.94
RTN4-211ENST00000438462 GALK2Q01415 458 aa9.15□□□□□ -0.94
RTN4-211ENST00000438462 TGFBIQ15582 683 aa9.15□□□□□ -0.94
RTN4-211ENST00000438462 CCNG2Q16589 344 aa9.15□□□□□ -0.94
RTN4-211ENST00000438462 CCNYL2Q5T2Q4 361 aa9.15□□□□□ -0.94
RTN4-211ENST00000438462 ZNF774Q6NX45 483 aa9.15□□□□□ -0.94
RTN4-211ENST00000438462 CBLN3Q6UW01 205 aa9.15□□□□□ -0.94
RTN4-211ENST00000438462 LINGO2Q7L985 606 aa9.15□□□□□ -0.94
RTN4-211ENST00000438462 MYLK4Q86YV6 388 aaPredicted RBP9.15□□□□□ -0.94
RTN4-211ENST00000438462 TCAIMQ8N3R3 496 aa9.15□□□□□ -0.94
RTN4-211ENST00000438462 FITM2Q8N6M3 262 aa9.15□□□□□ -0.94
RTN4-211ENST00000438462 C2CD4AQ8NCU7 369 aaPredicted RBP9.15□□□□□ -0.94
RTN4-211ENST00000438462 PIK3R3Q92569 461 aa9.15□□□□□ -0.94
RTN4-211ENST00000438462 QRSL1Q9H0R6 528 aaKnown RBP9.15□□□□□ -0.94
RTN4-211ENST00000438462 MYLK2Q9H1R3 596 aa9.15□□□□□ -0.94
RTN4-211ENST00000438462 PSME2Q9UL46 239 aa9.15□□□□□ -0.94
RTN4-211ENST00000438462 CEACAM18A8MTB9 384 aa9.14□□□□□ -0.95
RTN4-211ENST00000438462 P2RY10O00398 339 aa9.14□□□□□ -0.95
RTN4-211ENST00000438462 ZSCAN5DPP0CG00 497 aa9.14□□□□□ -0.95
RTN4-211ENST00000438462 HPGDP15428 266 aa9.14□□□□□ -0.95
RTN4-211ENST00000438462 CFHR2P36980 270 aa9.14□□□□□ -0.95
RTN4-211ENST00000438462 CAPZA2P47755 286 aa9.14□□□□□ -0.95
RTN4-211ENST00000438462 MAPK12P53778 367 aa9.14□□□□□ -0.95
RTN4-211ENST00000438462 KLF3P57682 345 aaPredicted RBP9.14□□□□□ -0.95
RTN4-211ENST00000438462 GLO1Q04760 184 aa9.14□□□□□ -0.95
RTN4-211ENST00000438462 TRMT5Q32P41 509 aaKnown RBP9.14□□□□□ -0.95
RTN4-211ENST00000438462 SYT14P1Q58G82 188 aa9.14□□□□□ -0.95
RTN4-211ENST00000438462 RGS7BPQ6MZT1 257 aaPredicted RBP9.14□□□□□ -0.95
RTN4-211ENST00000438462 VASH1Q7L8A9 365 aaPredicted RBP9.14□□□□□ -0.95
RTN4-211ENST00000438462 KIF18AQ8NI77 898 aa9.14□□□□□ -0.95
RTN4-211ENST00000438462 TMEM45BQ96B21 275 aa9.14□□□□□ -0.95
RTN4-211ENST00000438462 ATOH8Q96SQ7 321 aa9.14□□□□□ -0.95
RTN4-211ENST00000438462 TSGA10Q9BZW7 698 aa9.14□□□□□ -0.95
RTN4-211ENST00000438462 SEMA6AQ9H2E6 1030 aa9.14□□□□□ -0.95
RTN4-211ENST00000438462 SERHL2Q9H4I8 314 aa9.14□□□□□ -0.95
RTN4-211ENST00000438462 ZMAT5Q9UDW3 170 aaKnown RBP9.14□□□□□ -0.95
RTN4-211ENST00000438462 DYNC1H1Q14204 4646 aaKnown RBP9.14□□□□□ -0.95
RTN4-211ENST00000438462 HSPG2P98160 4391 aa9.13□□□□□ -0.95
RTN4-211ENST00000438462 RSL1D1O76021 490 aaKnown RBP9.13□□□□□ -0.95
RTN4-211ENST00000438462 MT-ND5P03915 603 aa9.13□□□□□ -0.95
RTN4-211ENST00000438462 OR8G3PP0DMU2 310 aa9.13□□□□□ -0.95
RTN4-211ENST00000438462 HOXB1P14653 301 aaPredicted RBP9.13□□□□□ -0.95
RTN4-211ENST00000438462 STIP1P31948 543 aaKnown RBP9.13□□□□□ -0.95
RTN4-211ENST00000438462 P2RX1P51575 399 aa9.13□□□□□ -0.95
RTN4-211ENST00000438462 BTG1P62324 171 aa9.13□□□□□ -0.95
RTN4-211ENST00000438462 ZBED6P86452 979 aa9.13□□□□□ -0.95
RTN4-211ENST00000438462 ZMYND11Q15326 602 aa9.13□□□□□ -0.95
RTN4-211ENST00000438462 SLC25A53Q5H9E4 307 aa9.13□□□□□ -0.95
RTN4-211ENST00000438462 STEAP4Q687X5 459 aa9.13□□□□□ -0.95
RTN4-211ENST00000438462 UNQ9370/PRO34162Q6UXP9 181 aa9.13□□□□□ -0.95
RTN4-211ENST00000438462 AAED1Q7RTV5 226 aa9.13□□□□□ -0.95
RTN4-211ENST00000438462 ZAR1Q86SH2 424 aa9.13□□□□□ -0.95
RTN4-211ENST00000438462 CMIPQ8IY22 773 aa9.13□□□□□ -0.95
RTN4-211ENST00000438462 LINC00482Q8N8I6 264 aa9.13□□□□□ -0.95
RTN4-211ENST00000438462 GPR119Q8TDV5 335 aa9.13□□□□□ -0.95
RTN4-211ENST00000438462 NSMAFQ92636 917 aa9.13□□□□□ -0.95
RTN4-211ENST00000438462 PAK5Q9P286 719 aa9.13□□□□□ -0.95
RTN4-211ENST00000438462 CTNNAL1Q9UBT7 734 aa9.13□□□□□ -0.95
RTN4-211ENST00000438462 IGLV3-9A0A075B6K5 115 aa9.12□□□□□ -0.95
RTN4-211ENST00000438462 TCRBV7S2A1N4TA0A589 114 aa9.12□□□□□ -0.95
RTN4-211ENST00000438462 TM9SF1O15321 606 aa9.12□□□□□ -0.95
RTN4-211ENST00000438462 RAMP3O60896 148 aa9.12□□□□□ -0.95
RTN4-211ENST00000438462 SEMA3DO95025 777 aa9.12□□□□□ -0.95
RTN4-211ENST00000438462 CLIC3O95833 236 aa9.12□□□□□ -0.95
RTN4-211ENST00000438462 CHRM4P08173 479 aa9.12□□□□□ -0.95
RTN4-211ENST00000438462 TFPIP10646 304 aa9.12□□□□□ -0.95
RTN4-211ENST00000438462 RPS2P15880 293 aaKnown RBP9.12□□□□□ -0.95
RTN4-211ENST00000438462 SLC6A2P23975 617 aa9.12□□□□□ -0.95
RTN4-211ENST00000438462 EPHA3P29320 983 aa9.12□□□□□ -0.95
RTN4-211ENST00000438462 TYK2P29597 1187 aa9.12□□□□□ -0.95
RTN4-211ENST00000438462 GABRA3P34903 492 aa9.12□□□□□ -0.95
RTN4-211ENST00000438462 CETN2P41208 172 aa9.12□□□□□ -0.95
RTN4-211ENST00000438462 SUMO3P55854 103 aaPredicted RBP9.12□□□□□ -0.95
RTN4-211ENST00000438462 SELENOVP59797 346 aa9.12□□□□□ -0.95
RTN4-211ENST00000438462 ZNF460Q14592 562 aa9.12□□□□□ -0.95
RTN4-211ENST00000438462 HEPACAMQ14CZ8 416 aa9.12□□□□□ -0.95
RTN4-211ENST00000438462 TCEAL1Q15170 157 aa9.12□□□□□ -0.95
RTN4-211ENST00000438462 NDUFAF6Q330K2 333 aa9.12□□□□□ -0.95
RTN4-211ENST00000438462 TIGD2Q4W5G0 525 aa9.12□□□□□ -0.95
RTN4-211ENST00000438462 FAM209AQ5JX71 171 aa9.12□□□□□ -0.95
RTN4-211ENST00000438462 COX20Q5RI15 118 aa9.12□□□□□ -0.95
RTN4-211ENST00000438462 PIWIL3Q7Z3Z3 882 aaKnown RBP9.12□□□□□ -0.95
RTN4-211ENST00000438462 LRRC28Q86X40 367 aaPredicted RBP9.12□□□□□ -0.95
RTN4-211ENST00000438462 CALHM3Q86XJ0 350 aa9.12□□□□□ -0.95
RTN4-211ENST00000438462 ZNF101Q8IZC7 436 aa9.12□□□□□ -0.95
RTN4-211ENST00000438462 FAM9CQ8IZT9 166 aa9.12□□□□□ -0.95
RTN4-211ENST00000438462 TXLNBQ8N3L3 684 aa9.12□□□□□ -0.95
RTN4-211ENST00000438462 CCDC89Q8N998 374 aa9.12□□□□□ -0.95
RTN4-211ENST00000438462 PHOSPHO1Q8TCT1 267 aa9.12□□□□□ -0.95
RTN4-211ENST00000438462 MGARPQ8TDB4 240 aa9.12□□□□□ -0.95
RTN4-211ENST00000438462 WIPF2Q8TF74 440 aaPredicted RBP9.12□□□□□ -0.95
RTN4-211ENST00000438462 GEMIN6Q8WXD5 167 aaKnown RBP9.12□□□□□ -0.95
RTN4-211ENST00000438462 LHX4Q969G2 390 aa9.12□□□□□ -0.95
RTN4-211ENST00000438462 C3orf30Q96M34 536 aa9.12□□□□□ -0.95
RTN4-211ENST00000438462 ZNF385AQ96PM9 386 aaKnown RBP9.12□□□□□ -0.95
RTN4-211ENST00000438462 LMF2Q9BU23 707 aaKnown RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms