RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 ROPN1BQ9BZX4 212 aaPredicted RBP2.55□□□□□ -2
TRAPPC13-204ENST00000438419 MARCH5Q9NX47 278 aa2.55□□□□□ -2
TRAPPC13-204ENST00000438419 SUN2Q9UH99 717 aa2.55□□□□□ -2
TRAPPC13-204ENST00000438419 TRAF3IP3Q9Y228 551 aa2.55□□□□□ -2
TRAPPC13-204ENST00000438419 KIF21AQ7Z4S6 1674 aa2.55□□□□□ -2
TRAPPC13-204ENST00000438419 TDRD6O60522 2096 aaKnown RBP2.55□□□□□ -2
TRAPPC13-204ENST00000438419 ATP10AO60312 1499 aa2.54□□□□□ -2
TRAPPC13-204ENST00000438419 A0A1W2PNU3 283 aaPredicted RBP2.54□□□□□ -2
TRAPPC13-204ENST00000438419 CLDN9O95484 217 aa2.54□□□□□ -2
TRAPPC13-204ENST00000438419 ELK1P19419 428 aa2.54□□□□□ -2
TRAPPC13-204ENST00000438419 UGT1A5P35504 534 aa2.54□□□□□ -2
TRAPPC13-204ENST00000438419 PTGDSP41222 190 aa2.54□□□□□ -2
TRAPPC13-204ENST00000438419 BTDP43251 543 aa2.54□□□□□ -2
TRAPPC13-204ENST00000438419 SSR1P43307 286 aaKnown RBP2.54□□□□□ -2
TRAPPC13-204ENST00000438419 GSSP48637 474 aa2.54□□□□□ -2
TRAPPC13-204ENST00000438419 SULT1E1P49888 294 aa2.54□□□□□ -2
TRAPPC13-204ENST00000438419 DUSP3P51452 185 aaPredicted RBP2.54□□□□□ -2
TRAPPC13-204ENST00000438419 GPM6AP51674 278 aa2.54□□□□□ -2
TRAPPC13-204ENST00000438419 WNT4P56705 351 aa2.54□□□□□ -2
TRAPPC13-204ENST00000438419 ACTR3P61158 418 aa2.54□□□□□ -2
TRAPPC13-204ENST00000438419 CSNK1G2P78368 415 aa2.54□□□□□ -2
TRAPPC13-204ENST00000438419 CDK16Q00536 496 aa2.54□□□□□ -2
TRAPPC13-204ENST00000438419 EGFEM1PQ0D2K5 195 aa2.54□□□□□ -2
TRAPPC13-204ENST00000438419 OXA1LQ15070 435 aa2.54□□□□□ -2
TRAPPC13-204ENST00000438419 DUSP7Q16829 419 aa2.54□□□□□ -2
TRAPPC13-204ENST00000438419 BCL7AQ4VC05 210 aa2.54□□□□□ -2
TRAPPC13-204ENST00000438419 C2orf83Q53S99 150 aa2.54□□□□□ -2
TRAPPC13-204ENST00000438419 SAMD4BQ5PRF9 694 aaKnown RBP2.54□□□□□ -2
TRAPPC13-204ENST00000438419 CCDC183Q5T5S1 534 aa2.54□□□□□ -2
TRAPPC13-204ENST00000438419 OR2G6Q5TZ20 316 aa2.54□□□□□ -2
TRAPPC13-204ENST00000438419 OR52E8Q6IFG1 317 aa2.54□□□□□ -2
TRAPPC13-204ENST00000438419 Q6ZN92 141 aa2.54□□□□□ -2
TRAPPC13-204ENST00000438419 ECHDC2Q86YB7 292 aa2.54□□□□□ -2
TRAPPC13-204ENST00000438419 TGIF2LXQ8IUE1 241 aa2.54□□□□□ -2
TRAPPC13-204ENST00000438419 UBE2J2Q8N2K1 259 aa2.54□□□□□ -2
TRAPPC13-204ENST00000438419 BBS1Q8NFJ9 593 aa2.54□□□□□ -2
TRAPPC13-204ENST00000438419 AKR7LQ8NHP1 331 aa2.54□□□□□ -2
TRAPPC13-204ENST00000438419 CHCHD10Q8WYQ3 142 aaPredicted RBP2.54□□□□□ -2
TRAPPC13-204ENST00000438419 UFD1Q92890 307 aa2.54□□□□□ -2
TRAPPC13-204ENST00000438419 NT5C3BQ969T7 300 aa2.54□□□□□ -2
TRAPPC13-204ENST00000438419 NUS1Q96E22 293 aa2.54□□□□□ -2
TRAPPC13-204ENST00000438419 FMO2Q99518 471 aa2.54□□□□□ -2
TRAPPC13-204ENST00000438419 EBF4Q9BQW3 602 aa2.54□□□□□ -2
TRAPPC13-204ENST00000438419 MRPL45Q9BRJ2 306 aaKnown RBP2.54□□□□□ -2
TRAPPC13-204ENST00000438419 TCHPQ9BT92 498 aa2.54□□□□□ -2
TRAPPC13-204ENST00000438419 NAT9Q9BTE0 207 aa2.54□□□□□ -2
TRAPPC13-204ENST00000438419 METTL7AQ9H8H3 244 aa2.54□□□□□ -2
TRAPPC13-204ENST00000438419 PLSCR3Q9NRY6 295 aa2.54□□□□□ -2
TRAPPC13-204ENST00000438419 DCDC2Q9UHG0 476 aa2.54□□□□□ -2
TRAPPC13-204ENST00000438419 BTNL2Q9UIR0 455 aa2.54□□□□□ -2
TRAPPC13-204ENST00000438419 TMCO1Q9UM00 188 aa2.54□□□□□ -2
TRAPPC13-204ENST00000438419 RPL36Q9Y3U8 105 aaKnown RBP2.54□□□□□ -2
TRAPPC13-204ENST00000438419 UGT2A1Q9Y4X1 527 aa2.54□□□□□ -2
TRAPPC13-204ENST00000438419 V9GY05 133 aa2.54□□□□□ -2
TRAPPC13-204ENST00000438419 IGKV1D-8A0A087WSZ0 117 aa2.53□□□□□ -2
TRAPPC13-204ENST00000438419 FAM240BA0A1B0GVZ2 78 aa2.53□□□□□ -2
TRAPPC13-204ENST00000438419 A6NIZ1 184 aa2.53□□□□□ -2
TRAPPC13-204ENST00000438419 HAS3O00219 553 aa2.53□□□□□ -2
TRAPPC13-204ENST00000438419 TOM1O60784 492 aa2.53□□□□□ -2
TRAPPC13-204ENST00000438419 HMMRO75330 724 aa2.53□□□□□ -2
TRAPPC13-204ENST00000438419 LGI1O95970 557 aa2.53□□□□□ -2
TRAPPC13-204ENST00000438419 ACTL6AO96019 429 aa2.53□□□□□ -2
TRAPPC13-204ENST00000438419 TIMP1P01033 207 aa2.53□□□□□ -2
TRAPPC13-204ENST00000438419 IGHV3-48P01763 117 aa2.53□□□□□ -2
TRAPPC13-204ENST00000438419 ZNF853P0CG23 659 aa2.53□□□□□ -2
TRAPPC13-204ENST00000438419 CD1EP15812 388 aa2.53□□□□□ -2
TRAPPC13-204ENST00000438419 MX1P20591 662 aa2.53□□□□□ -2
TRAPPC13-204ENST00000438419 EPS15P42566 896 aa2.53□□□□□ -2
TRAPPC13-204ENST00000438419 RAP1BP61224 184 aa2.53□□□□□ -2
TRAPPC13-204ENST00000438419 SELENOTP62341 195 aa2.53□□□□□ -2
TRAPPC13-204ENST00000438419 OGDHQ02218 1023 aa2.53□□□□□ -2
TRAPPC13-204ENST00000438419 LRRC74AQ0VAA2 488 aa2.53□□□□□ -2
TRAPPC13-204ENST00000438419 BST1Q10588 318 aa2.53□□□□□ -2
TRAPPC13-204ENST00000438419 ASPHQ12797 758 aa2.53□□□□□ -2
TRAPPC13-204ENST00000438419 CARD16Q5EG05 197 aa2.53□□□□□ -2
TRAPPC13-204ENST00000438419 EOGTQ5NDL2 527 aa2.53□□□□□ -2
TRAPPC13-204ENST00000438419 OTPQ5XKR4 325 aa2.53□□□□□ -2
TRAPPC13-204ENST00000438419 TIGD3Q6B0B8 471 aa2.53□□□□□ -2
TRAPPC13-204ENST00000438419 ENPP6Q6UWR7 440 aa2.53□□□□□ -2
TRAPPC13-204ENST00000438419 ZNF571Q7Z3V5 609 aaPredicted RBP2.53□□□□□ -2
TRAPPC13-204ENST00000438419 SLC26A11Q86WA9 606 aa2.53□□□□□ -2
TRAPPC13-204ENST00000438419 TRIM69Q86WT6 500 aa2.53□□□□□ -2
TRAPPC13-204ENST00000438419 KRTAP11-1Q8IUC1 163 aa2.53□□□□□ -2
TRAPPC13-204ENST00000438419 TGIF2LYQ8IUE0 185 aa2.53□□□□□ -2
TRAPPC13-204ENST00000438419 SLC22A9Q8IVM8 553 aa2.53□□□□□ -2
TRAPPC13-204ENST00000438419 ACOT4Q8N9L9 421 aa2.53□□□□□ -2
TRAPPC13-204ENST00000438419 ZNF740Q8NDX6 193 aa2.53□□□□□ -2
TRAPPC13-204ENST00000438419 FAM83FQ8NEG4 500 aaPredicted RBP2.53□□□□□ -2
TRAPPC13-204ENST00000438419 OR2AP1Q8NGE2 309 aa2.53□□□□□ -2
TRAPPC13-204ENST00000438419 DNAJA4Q8WW22 397 aaPredicted RBP2.53□□□□□ -2
TRAPPC13-204ENST00000438419 OR1E3Q8WZA6 343 aa2.53□□□□□ -2
TRAPPC13-204ENST00000438419 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.53□□□□□ -2
TRAPPC13-204ENST00000438419 TUBGCP3Q96CW5 907 aa2.53□□□□□ -2
TRAPPC13-204ENST00000438419 CMTM7Q96FZ5 175 aa2.53□□□□□ -2
TRAPPC13-204ENST00000438419 PAGE5Q96GU1 130 aa2.53□□□□□ -2
TRAPPC13-204ENST00000438419 ZNF641Q96N77 438 aaPredicted RBP2.53□□□□□ -2
TRAPPC13-204ENST00000438419 POLR2J2Q9GZM3 115 aaKnown RBP2.53□□□□□ -2
TRAPPC13-204ENST00000438419 ACTR6Q9GZN1 396 aa2.53□□□□□ -2
TRAPPC13-204ENST00000438419 POLR2J3Q9H1A7 115 aaKnown RBP2.53□□□□□ -2
TRAPPC13-204ENST00000438419 NARFLQ9H6Q4 476 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms