RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 NHSL2Q5HYW2 709 aa6.35□□□□□ -1.39
LSM3P3-201ENST00000436601 TTC33Q6PID6 262 aaPredicted RBP6.35□□□□□ -1.39
LSM3P3-201ENST00000436601 KLHL17Q6TDP4 642 aa6.35□□□□□ -1.39
LSM3P3-201ENST00000436601 IGFL3Q6UXB1 125 aa6.35□□□□□ -1.39
LSM3P3-201ENST00000436601 TMPRSS11FQ6ZWK6 438 aa6.35□□□□□ -1.39
LSM3P3-201ENST00000436601 GALNTL5Q7Z4T8 443 aa6.35□□□□□ -1.39
LSM3P3-201ENST00000436601 GALNT5Q7Z7M9 940 aa6.35□□□□□ -1.39
LSM3P3-201ENST00000436601 NRMQ8IXM6 262 aa6.35□□□□□ -1.39
LSM3P3-201ENST00000436601 RNF113BQ8IZP6 322 aaKnown RBP6.35□□□□□ -1.39
LSM3P3-201ENST00000436601 LINC00471Q8N535 108 aa6.35□□□□□ -1.39
LSM3P3-201ENST00000436601 ATG16L2Q8NAA4 619 aa6.35□□□□□ -1.39
LSM3P3-201ENST00000436601 OR5M1Q8NGP8 315 aa6.35□□□□□ -1.39
LSM3P3-201ENST00000436601 GNPDA2Q8TDQ7 276 aa6.35□□□□□ -1.39
LSM3P3-201ENST00000436601 ZCCHC14Q8WYQ9 949 aaKnown RBP6.35□□□□□ -1.39
LSM3P3-201ENST00000436601 MRGPRX4Q96LA9 322 aa6.35□□□□□ -1.39
LSM3P3-201ENST00000436601 C5orf34Q96MH7 638 aa6.35□□□□□ -1.39
LSM3P3-201ENST00000436601 MBOAT4Q96T53 435 aa6.35□□□□□ -1.39
LSM3P3-201ENST00000436601 TMEM43Q9BTV4 400 aa6.35□□□□□ -1.39
LSM3P3-201ENST00000436601 DGCR6LQ9BY27 220 aa6.35□□□□□ -1.39
LSM3P3-201ENST00000436601 SLC19A3Q9BZV2 496 aa6.35□□□□□ -1.39
LSM3P3-201ENST00000436601 UBQLN3Q9H347 655 aa6.35□□□□□ -1.39
LSM3P3-201ENST00000436601 PTGES2Q9H7Z7 377 aa6.35□□□□□ -1.39
LSM3P3-201ENST00000436601 SMPD3Q9NY59 655 aaPredicted RBP6.35□□□□□ -1.39
LSM3P3-201ENST00000436601 SELENONQ9NZV5 590 aa6.35□□□□□ -1.39
LSM3P3-201ENST00000436601 MGAT4BQ9UQ53 548 aa6.35□□□□□ -1.39
LSM3P3-201ENST00000436601 VDAC3Q9Y277 283 aa6.35□□□□□ -1.39
LSM3P3-201ENST00000436601 KLF13Q9Y2Y9 288 aaPredicted RBP6.35□□□□□ -1.39
LSM3P3-201ENST00000436601 TMED7Q9Y3B3 224 aa6.35□□□□□ -1.39
LSM3P3-201ENST00000436601 MED31Q9Y3C7 131 aa6.35□□□□□ -1.39
LSM3P3-201ENST00000436601 LRRC42Q9Y546 428 aa6.35□□□□□ -1.39
LSM3P3-201ENST00000436601 PCDHGB6Q9Y5F9 930 aa6.35□□□□□ -1.39
LSM3P3-201ENST00000436601 PCDHGA9Q9Y5G4 932 aaKnown RBP6.35□□□□□ -1.39
LSM3P3-201ENST00000436601 CROCCQ5TZA2 2017 aa6.35□□□□□ -1.39
LSM3P3-201ENST00000436601 NUP214P35658 2090 aaPredicted RBP6.34□□□□□ -1.39
LSM3P3-201ENST00000436601 ZC3H12DA2A288 527 aaKnown RBP6.34□□□□□ -1.39
LSM3P3-201ENST00000436601 E9PQ18 207 aa6.34□□□□□ -1.39
LSM3P3-201ENST00000436601 KLRC4-KLRK1H3BQV0 150 aa6.34□□□□□ -1.39
LSM3P3-201ENST00000436601 KPNA4O00629 521 aaPredicted RBP6.34□□□□□ -1.39
LSM3P3-201ENST00000436601 CDC42EP2O14613 210 aa6.34□□□□□ -1.39
LSM3P3-201ENST00000436601 NPIPB7O75200 414 aa6.34□□□□□ -1.39
LSM3P3-201ENST00000436601 ADAP00813 363 aa6.34□□□□□ -1.39
LSM3P3-201ENST00000436601 F13BP05160 661 aa6.34□□□□□ -1.39
LSM3P3-201ENST00000436601 IGFBP1P08833 259 aaPredicted RBP6.34□□□□□ -1.39
LSM3P3-201ENST00000436601 IFI30P13284 250 aa6.34□□□□□ -1.39
LSM3P3-201ENST00000436601 HK1P19367 917 aa6.34□□□□□ -1.39
LSM3P3-201ENST00000436601 FUT1P19526 365 aa6.34□□□□□ -1.39
LSM3P3-201ENST00000436601 TCEA1P23193 301 aaKnown RBP6.34□□□□□ -1.39
LSM3P3-201ENST00000436601 IGFBP5P24593 272 aa6.34□□□□□ -1.39
LSM3P3-201ENST00000436601 CXCR1P25024 350 aa6.34□□□□□ -1.39
LSM3P3-201ENST00000436601 FPR3P25089 353 aa6.34□□□□□ -1.39
LSM3P3-201ENST00000436601 SRD5A2P31213 254 aa6.34□□□□□ -1.39
LSM3P3-201ENST00000436601 IFNGR2P38484 337 aa6.34□□□□□ -1.39
LSM3P3-201ENST00000436601 RFC3P40938 356 aa6.34□□□□□ -1.39
LSM3P3-201ENST00000436601 APOBEC1P41238 236 aaKnown RBP6.34□□□□□ -1.39
LSM3P3-201ENST00000436601 EIF1P41567 113 aaKnown RBP6.34□□□□□ -1.39
LSM3P3-201ENST00000436601 GPR4P46093 362 aa6.34□□□□□ -1.39
LSM3P3-201ENST00000436601 GSSP48637 474 aa6.34□□□□□ -1.39
LSM3P3-201ENST00000436601 MEOX1P50221 254 aa6.34□□□□□ -1.39
LSM3P3-201ENST00000436601 B3GALT5-AS1P59052 145 aa6.34□□□□□ -1.39
LSM3P3-201ENST00000436601 CXADRP78310 365 aa6.34□□□□□ -1.39
LSM3P3-201ENST00000436601 LTBQ06643 244 aa6.34□□□□□ -1.39
LSM3P3-201ENST00000436601 FHL1Q13642 323 aa6.34□□□□□ -1.39
LSM3P3-201ENST00000436601 HYAL4Q2M3T9 481 aa6.34□□□□□ -1.39
LSM3P3-201ENST00000436601 LINC00303Q3SY05 128 aa6.34□□□□□ -1.39
LSM3P3-201ENST00000436601 ZIK1Q3SY52 487 aaPredicted RBP6.34□□□□□ -1.39
LSM3P3-201ENST00000436601 GLYR1Q49A26 553 aaPredicted RBP6.34□□□□□ -1.39
LSM3P3-201ENST00000436601 C6orf52Q5T4I8 152 aa6.34□□□□□ -1.39
LSM3P3-201ENST00000436601 C1QL3Q5VWW1 255 aa6.34□□□□□ -1.39
LSM3P3-201ENST00000436601 CD300LDQ6UXZ3 194 aa6.34□□□□□ -1.39
LSM3P3-201ENST00000436601 RRM2BQ7LG56 351 aa6.34□□□□□ -1.39
LSM3P3-201ENST00000436601 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.34□□□□□ -1.39
LSM3P3-201ENST00000436601 Q8N1Y9 231 aa6.34□□□□□ -1.39
LSM3P3-201ENST00000436601 GTPBP8Q8N3Z3 284 aaPredicted RBP6.34□□□□□ -1.39
LSM3P3-201ENST00000436601 CISD2Q8N5K1 135 aaKnown RBP6.34□□□□□ -1.39
LSM3P3-201ENST00000436601 ZFP62Q8NB50 900 aaPredicted RBP6.34□□□□□ -1.39
LSM3P3-201ENST00000436601 PIGXQ8TBF5 258 aa6.34□□□□□ -1.39
LSM3P3-201ENST00000436601 DNAJC9Q8WXX5 260 aa6.34□□□□□ -1.39
LSM3P3-201ENST00000436601 TFAP2CQ92754 450 aa6.34□□□□□ -1.39
LSM3P3-201ENST00000436601 EXTL1Q92935 676 aa6.34□□□□□ -1.39
LSM3P3-201ENST00000436601 ZBTB8AQ96BR9 441 aa6.34□□□□□ -1.39
LSM3P3-201ENST00000436601 BPIFA2Q96DR5 249 aa6.34□□□□□ -1.39
LSM3P3-201ENST00000436601 KTI12Q96EK9 354 aaPredicted RBP6.34□□□□□ -1.39
LSM3P3-201ENST00000436601 ZNF184Q99676 751 aaPredicted RBP6.34□□□□□ -1.39
LSM3P3-201ENST00000436601 PTDSS2Q9BVG9 487 aa6.34□□□□□ -1.39
LSM3P3-201ENST00000436601 TTTY12Q9BZ98 90 aa6.34□□□□□ -1.39
LSM3P3-201ENST00000436601 UCK2Q9BZX2 261 aa6.34□□□□□ -1.39
LSM3P3-201ENST00000436601 OR11A1Q9GZK7 315 aa6.34□□□□□ -1.39
LSM3P3-201ENST00000436601 CDIP1Q9H305 208 aa6.34□□□□□ -1.39
LSM3P3-201ENST00000436601 VCXQ9H320 206 aa6.34□□□□□ -1.39
LSM3P3-201ENST00000436601 TOR3AQ9H497 397 aa6.34□□□□□ -1.39
LSM3P3-201ENST00000436601 PAPOLBQ9NRJ5 636 aaKnown RBP6.34□□□□□ -1.39
LSM3P3-201ENST00000436601 KRT84Q9NSB2 600 aa6.34□□□□□ -1.39
LSM3P3-201ENST00000436601 BOKQ9UMX3 212 aaPredicted RBP6.34□□□□□ -1.39
LSM3P3-201ENST00000436601 RPH3AQ9Y2J0 694 aaPredicted RBP6.34□□□□□ -1.39
LSM3P3-201ENST00000436601 MRPS18CQ9Y3D5 142 aaKnown RBP6.34□□□□□ -1.39
LSM3P3-201ENST00000436601 SEC16AO15027 2179 aa6.33□□□□□ -1.4
LSM3P3-201ENST00000436601 TRAV17A0A0B4J275 112 aa6.33□□□□□ -1.4
LSM3P3-201ENST00000436601 OR2M5A3KFT3 312 aa6.33□□□□□ -1.4
LSM3P3-201ENST00000436601 TMEM8BA6NDV4 472 aa6.33□□□□□ -1.4
LSM3P3-201ENST00000436601 ENO4A6NNW6 628 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms