RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 ACOD1A6NK06 481 aa10.82□□□□□ -0.68
CD44-209ENST00000433892 C4orf47A7E2U8 309 aa10.82□□□□□ -0.68
CD44-209ENST00000433892 IFI6P09912 130 aa10.82□□□□□ -0.68
CD44-209ENST00000433892 SPI1P17947 270 aa10.82□□□□□ -0.68
CD44-209ENST00000433892 DIO1P49895 249 aa10.82□□□□□ -0.68
CD44-209ENST00000433892 GPR143P51810 404 aa10.82□□□□□ -0.68
CD44-209ENST00000433892 BTG2P78543 158 aa10.82□□□□□ -0.68
CD44-209ENST00000433892 ZNF141Q15928 474 aa10.82□□□□□ -0.68
CD44-209ENST00000433892 AVL9Q8NBF6 648 aa10.82□□□□□ -0.68
CD44-209ENST00000433892 DACT3Q96B18 629 aaPredicted RBP10.82□□□□□ -0.68
CD44-209ENST00000433892 MS4A3Q96HJ5 214 aa10.82□□□□□ -0.68
CD44-209ENST00000433892 SLC25A18Q9H1K4 315 aa10.82□□□□□ -0.68
CD44-209ENST00000433892 EVA1AQ9H8M9 152 aa10.82□□□□□ -0.68
CD44-209ENST00000433892 NRIP3Q9NQ35 241 aa10.82□□□□□ -0.68
CD44-209ENST00000433892 C2orf42Q9NWW7 574 aa10.82□□□□□ -0.68
CD44-209ENST00000433892 MRPL15Q9P015 296 aaKnown RBP10.82□□□□□ -0.68
CD44-209ENST00000433892 MGAT4AQ9UM21 535 aa10.82□□□□□ -0.68
CD44-209ENST00000433892 SPATA2Q9UM82 520 aa10.82□□□□□ -0.68
CD44-209ENST00000433892 ING4Q9UNL4 249 aa10.82□□□□□ -0.68
CD44-209ENST00000433892 HEATR5AQ86XA9 2040 aa10.82□□□□□ -0.68
CD44-209ENST00000433892 A0A087WUJ7 227 aa10.81□□□□□ -0.68
CD44-209ENST00000433892 TCRBV21S2A2A0A5A6 115 aa10.81□□□□□ -0.68
CD44-209ENST00000433892 FAM221BA6H8Z2 402 aa10.81□□□□□ -0.68
CD44-209ENST00000433892 OR5K3A6NET4 321 aa10.81□□□□□ -0.68
CD44-209ENST00000433892 TRABD2BA6NFA1 517 aa10.81□□□□□ -0.68
CD44-209ENST00000433892 NPIPB9F8W1W9 429 aa10.81□□□□□ -0.68
CD44-209ENST00000433892 GATBO75879 557 aaKnown RBP10.81□□□□□ -0.68
CD44-209ENST00000433892 WNT1P04628 370 aa10.81□□□□□ -0.68
CD44-209ENST00000433892 CT45A8P0DMV1 189 aa10.81□□□□□ -0.68
CD44-209ENST00000433892 CT45A9P0DMV2 189 aa10.81□□□□□ -0.68
CD44-209ENST00000433892 SRMP19623 302 aa10.81□□□□□ -0.68
CD44-209ENST00000433892 LGALS3BPQ08380 585 aa10.81□□□□□ -0.68
CD44-209ENST00000433892 SNTB2Q13425 540 aaKnown RBP10.81□□□□□ -0.68
CD44-209ENST00000433892 CT45A2Q5DJT8 189 aa10.81□□□□□ -0.68
CD44-209ENST00000433892 HES5Q5TA89 166 aa10.81□□□□□ -0.68
CD44-209ENST00000433892 DPY19L2P2Q6ZN68 376 aa10.81□□□□□ -0.68
CD44-209ENST00000433892 OVCH1Q7RTY7 1134 aa10.81□□□□□ -0.68
CD44-209ENST00000433892 SLITRK4Q8IW52 837 aa10.81□□□□□ -0.68
CD44-209ENST00000433892 CMTM4Q8IZR5 234 aa10.81□□□□□ -0.68
CD44-209ENST00000433892 ZNF687Q8N1G0 1237 aa10.81□□□□□ -0.68
CD44-209ENST00000433892 SLC43A2Q8N370 569 aa10.81□□□□□ -0.68
CD44-209ENST00000433892 ARHGEF39Q8N4T4 335 aa10.81□□□□□ -0.68
CD44-209ENST00000433892 RPLP0P6Q8NHW5 317 aa10.81□□□□□ -0.68
CD44-209ENST00000433892 ZNF431Q8TF32 576 aaPredicted RBP10.81□□□□□ -0.68
CD44-209ENST00000433892 GCDHQ92947 438 aaPredicted RBP10.81□□□□□ -0.68
CD44-209ENST00000433892 GPR174Q9BXC1 333 aa10.81□□□□□ -0.68
CD44-209ENST00000433892 BEX1Q9HBH7 125 aa10.81□□□□□ -0.68
CD44-209ENST00000433892 Q9N2J8 555 aa10.81□□□□□ -0.68
CD44-209ENST00000433892 ZFP64Q9NPA5 681 aa10.81□□□□□ -0.68
CD44-209ENST00000433892 ZNF346Q9UL40 294 aaKnown RBP10.81□□□□□ -0.68
CD44-209ENST00000433892 CAMK2AQ9UQM7 478 aa10.81□□□□□ -0.68
CD44-209ENST00000433892 OR10H1Q9Y4A9 318 aa10.81□□□□□ -0.68
CD44-209ENST00000433892 A0A087WV48 116 aa10.81□□□□□ -0.68
CD44-209ENST00000433892 PIN1P1O15428 100 aa10.81□□□□□ -0.68
CD44-209ENST00000433892 FOXS1O43638 330 aa10.81□□□□□ -0.68
CD44-209ENST00000433892 MAOAP21397 527 aa10.81□□□□□ -0.68
CD44-209ENST00000433892 HHEXQ03014 270 aa10.81□□□□□ -0.68
CD44-209ENST00000433892 DLX2Q07687 328 aaPredicted RBP10.81□□□□□ -0.68
CD44-209ENST00000433892 ARMC6Q6NXE6 501 aa10.81□□□□□ -0.68
CD44-209ENST00000433892 ZNF767PQ75MW2 155 aa10.81□□□□□ -0.68
CD44-209ENST00000433892 MCATQ8IVS2 390 aaKnown RBP10.81□□□□□ -0.68
CD44-209ENST00000433892 ZNF433Q8N7K0 673 aaPredicted RBP10.81□□□□□ -0.68
CD44-209ENST00000433892 BCORP1Q8N888 145 aa10.81□□□□□ -0.68
CD44-209ENST00000433892 GATSQ8NAP1 163 aa10.81□□□□□ -0.68
CD44-209ENST00000433892 OR11H4Q8NGC9 324 aa10.81□□□□□ -0.68
CD44-209ENST00000433892 OR8H1Q8NGG4 311 aa10.81□□□□□ -0.68
CD44-209ENST00000433892 MOSPD2Q8NHP6 518 aa10.81□□□□□ -0.68
CD44-209ENST00000433892 LRFN5Q96NI6 719 aa10.81□□□□□ -0.68
CD44-209ENST00000433892 SEMA6CQ9H3T2 930 aa10.81□□□□□ -0.68
CD44-209ENST00000433892 ERVK-19Q9WJR5 959 aa10.81□□□□□ -0.68
CD44-209ENST00000433892 PCDHGA9Q9Y5G4 932 aaKnown RBP10.81□□□□□ -0.68
CD44-209ENST00000433892 KIR2DS5A0A0G2JLQ3 304 aa10.8□□□□□ -0.68
CD44-209ENST00000433892 A0A0G2JNG1 304 aa10.8□□□□□ -0.68
CD44-209ENST00000433892 SERINC4A6NH21 518 aa10.8□□□□□ -0.68
CD44-209ENST00000433892 PRR32B1ATL7 298 aa10.8□□□□□ -0.68
CD44-209ENST00000433892 ZNF879B4DU55 563 aa10.8□□□□□ -0.68
CD44-209ENST00000433892 BLOC1S5-TXNDC5H3BN57 136 aa10.8□□□□□ -0.68
CD44-209ENST00000433892 KIR2DS3K7RE56 304 aa10.8□□□□□ -0.68
CD44-209ENST00000433892 SEMA4FO95754 770 aa10.8□□□□□ -0.68
CD44-209ENST00000433892 H2AFB2P0C5Z0 115 aa10.8□□□□□ -0.68
CD44-209ENST00000433892 ANXA3P12429 323 aa10.8□□□□□ -0.68
CD44-209ENST00000433892 RNH1P13489 461 aaKnown RBP10.8□□□□□ -0.68
CD44-209ENST00000433892 GDNFP39905 211 aa10.8□□□□□ -0.68
CD44-209ENST00000433892 CLDN12P56749 244 aa10.8□□□□□ -0.68
CD44-209ENST00000433892 NANOS3P60323 173 aaKnown RBP10.8□□□□□ -0.68
CD44-209ENST00000433892 KLF9Q13886 244 aaPredicted RBP10.8□□□□□ -0.68
CD44-209ENST00000433892 KIR2DS5Q14953 304 aa10.8□□□□□ -0.68
CD44-209ENST00000433892 SHHQ15465 462 aa10.8□□□□□ -0.68
CD44-209ENST00000433892 ST3GAL2Q16842 350 aa10.8□□□□□ -0.68
CD44-209ENST00000433892 GSG1Q2KHT4 349 aa10.8□□□□□ -0.68
CD44-209ENST00000433892 CD276Q5ZPR3 534 aa10.8□□□□□ -0.68
CD44-209ENST00000433892 LINGO2Q7L985 606 aa10.8□□□□□ -0.68
CD44-209ENST00000433892 SERPINA12Q8IW75 414 aa10.8□□□□□ -0.68
CD44-209ENST00000433892 METTL27Q8N6F8 245 aaPredicted RBP10.8□□□□□ -0.68
CD44-209ENST00000433892 C16orf52Q8NHV5 167 aa10.8□□□□□ -0.68
CD44-209ENST00000433892 HMGB4Q8WW32 186 aa10.8□□□□□ -0.68
CD44-209ENST00000433892 GIMAP1Q8WWP7 306 aa10.8□□□□□ -0.68
CD44-209ENST00000433892 ADAMTS14Q8WXS8 1223 aa10.8□□□□□ -0.68
CD44-209ENST00000433892 DGAT2Q96PD7 388 aa10.8□□□□□ -0.68
CD44-209ENST00000433892 TSSK2Q96PF2 358 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms