RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 APOA1P02647 267 aa2.2□□□□□ -2.06
CLK1-204ENST00000432425 GSTA1P08263 222 aa2.2□□□□□ -2.06
CLK1-204ENST00000432425 ZNF17P17021 662 aa2.2□□□□□ -2.06
CLK1-204ENST00000432425 PRKACAP17612 351 aa2.2□□□□□ -2.06
CLK1-204ENST00000432425 MDKP21741 143 aaPredicted RBP2.2□□□□□ -2.06
CLK1-204ENST00000432425 UQCRC2P22695 453 aa2.2□□□□□ -2.06
CLK1-204ENST00000432425 CD40LGP29965 261 aa2.2□□□□□ -2.06
CLK1-204ENST00000432425 MARCKSP29966 332 aaPredicted RBP2.2□□□□□ -2.06
CLK1-204ENST00000432425 RORAP35398 523 aa2.2□□□□□ -2.06
CLK1-204ENST00000432425 FDFT1P37268 417 aa2.2□□□□□ -2.06
CLK1-204ENST00000432425 RANBP1P43487 201 aa2.2□□□□□ -2.06
CLK1-204ENST00000432425 OR3A4PP47883 348 aa2.2□□□□□ -2.06
CLK1-204ENST00000432425 HSPA13P48723 471 aa2.2□□□□□ -2.06
CLK1-204ENST00000432425 PSMD7P51665 324 aa2.2□□□□□ -2.06
CLK1-204ENST00000432425 IRF8Q02556 426 aa2.2□□□□□ -2.06
CLK1-204ENST00000432425 PPP1R8Q12972 351 aaKnown RBP2.2□□□□□ -2.06
CLK1-204ENST00000432425 PSG7Q13046 419 aa2.2□□□□□ -2.06
CLK1-204ENST00000432425 RCAN2Q14206 197 aa2.2□□□□□ -2.06
CLK1-204ENST00000432425 PIGHQ14442 188 aaPredicted RBP2.2□□□□□ -2.06
CLK1-204ENST00000432425 PARP6Q2NL67 630 aa2.2□□□□□ -2.06
CLK1-204ENST00000432425 ZNF528Q3MIS6 628 aa2.2□□□□□ -2.06
CLK1-204ENST00000432425 ZNF658BQ4V348 819 aaPredicted RBP2.2□□□□□ -2.06
CLK1-204ENST00000432425 TEX44Q53QW1 395 aa2.2□□□□□ -2.06
CLK1-204ENST00000432425 SPANXN2Q5MJ10 180 aa2.2□□□□□ -2.06
CLK1-204ENST00000432425 ASPHD2Q6ICH7 369 aa2.2□□□□□ -2.06
CLK1-204ENST00000432425 ATRAIDQ6UW56 229 aa2.2□□□□□ -2.06
CLK1-204ENST00000432425 TPGS1Q6ZTW0 290 aa2.2□□□□□ -2.06
CLK1-204ENST00000432425 BZW1Q7L1Q6 419 aaKnown RBP2.2□□□□□ -2.06
CLK1-204ENST00000432425 NLRP9Q7RTR0 991 aa2.2□□□□□ -2.06
CLK1-204ENST00000432425 TSEN54Q7Z6J9 526 aaKnown RBP2.2□□□□□ -2.06
CLK1-204ENST00000432425 ECHDC2Q86YB7 292 aa2.2□□□□□ -2.06
CLK1-204ENST00000432425 TGIF2LYQ8IUE0 185 aa2.2□□□□□ -2.06
CLK1-204ENST00000432425 MISPQ8IVT2 679 aa2.2□□□□□ -2.06
CLK1-204ENST00000432425 ENTHD1Q8IYW4 607 aa2.2□□□□□ -2.06
CLK1-204ENST00000432425 MCOLN2Q8IZK6 566 aa2.2□□□□□ -2.06
CLK1-204ENST00000432425 CCNYL1Q8N7R7 359 aa2.2□□□□□ -2.06
CLK1-204ENST00000432425 OR4K14Q8NGD5 310 aa2.2□□□□□ -2.06
CLK1-204ENST00000432425 OR9K2Q8NGE7 335 aa2.2□□□□□ -2.06
CLK1-204ENST00000432425 OR4A15Q8NGL6 344 aa2.2□□□□□ -2.06
CLK1-204ENST00000432425 LRRC20Q8TCA0 184 aa2.2□□□□□ -2.06
CLK1-204ENST00000432425 MITD1Q8WV92 249 aa2.2□□□□□ -2.06
CLK1-204ENST00000432425 CAPSLQ8WWF8 208 aa2.2□□□□□ -2.06
CLK1-204ENST00000432425 CACNG8Q8WXS5 425 aa2.2□□□□□ -2.06
CLK1-204ENST00000432425 ZNF317Q96PQ6 595 aaPredicted RBP2.2□□□□□ -2.06
CLK1-204ENST00000432425 CCNL2Q96S94 520 aaPredicted RBP2.2□□□□□ -2.06
CLK1-204ENST00000432425 EBF4Q9BQW3 602 aa2.2□□□□□ -2.06
CLK1-204ENST00000432425 NDEL1Q9GZM8 345 aa2.2□□□□□ -2.06
CLK1-204ENST00000432425 GEMIN7Q9H840 131 aaKnown RBP2.2□□□□□ -2.06
CLK1-204ENST00000432425 ZNF702PQ9H963 129 aa2.2□□□□□ -2.06
CLK1-204ENST00000432425 VAT1LQ9HCJ6 419 aa2.2□□□□□ -2.06
CLK1-204ENST00000432425 CHRAC1Q9NRG0 131 aa2.2□□□□□ -2.06
CLK1-204ENST00000432425 GCNT4Q9P109 453 aa2.2□□□□□ -2.06
CLK1-204ENST00000432425 NARFQ9UHQ1 456 aa2.2□□□□□ -2.06
CLK1-204ENST00000432425 ZNF229Q9UJW7 825 aa2.2□□□□□ -2.06
CLK1-204ENST00000432425 TBC1D24Q9ULP9 559 aa2.2□□□□□ -2.06
CLK1-204ENST00000432425 SCML1Q9UN30 329 aa2.2□□□□□ -2.06
CLK1-204ENST00000432425 FOXJ3Q9UPW0 622 aa2.2□□□□□ -2.06
CLK1-204ENST00000432425 MRPS33Q9Y291 106 aaKnown RBP2.2□□□□□ -2.06
CLK1-204ENST00000432425 IFT52Q9Y366 437 aa2.2□□□□□ -2.06
CLK1-204ENST00000432425 ARHGAP23Q9P227 1491 aa2.2□□□□□ -2.06
CLK1-204ENST00000432425 INSRP06213 1382 aa2.2□□□□□ -2.06
CLK1-204ENST00000432425 A0A0J9YVX5 310 aa2.19□□□□□ -2.06
CLK1-204ENST00000432425 GOLGA8QA0A0J9YX86 632 aa2.19□□□□□ -2.06
CLK1-204ENST00000432425 A0A1W2PPV4 95 aa2.19□□□□□ -2.06
CLK1-204ENST00000432425 TCP11X1B4DZS4 312 aa2.19□□□□□ -2.06
CLK1-204ENST00000432425 EEF2KO00418 725 aaKnown RBP2.19□□□□□ -2.06
CLK1-204ENST00000432425 CHEK1O14757 476 aa2.19□□□□□ -2.06
CLK1-204ENST00000432425 POLR1CO15160 346 aaPredicted RBP2.19□□□□□ -2.06
CLK1-204ENST00000432425 CYTH3O43739 400 aa2.19□□□□□ -2.06
CLK1-204ENST00000432425 CA3P07451 260 aa2.19□□□□□ -2.06
CLK1-204ENST00000432425 HSMCR30P0CW71 290 aa2.19□□□□□ -2.06
CLK1-204ENST00000432425 MLNP12872 115 aa2.19□□□□□ -2.06
CLK1-204ENST00000432425 HOXB8P17481 243 aaPredicted RBP2.19□□□□□ -2.06
CLK1-204ENST00000432425 TNNI3P19429 210 aa2.19□□□□□ -2.06
CLK1-204ENST00000432425 IGHV1-2P23083 117 aa2.19□□□□□ -2.06
CLK1-204ENST00000432425 IL32P24001 234 aa2.19□□□□□ -2.06
CLK1-204ENST00000432425 CRATP43155 626 aa2.19□□□□□ -2.06
CLK1-204ENST00000432425 CDC34P49427 236 aaPredicted RBP2.19□□□□□ -2.06
CLK1-204ENST00000432425 CASP4P49662 377 aa2.19□□□□□ -2.06
CLK1-204ENST00000432425 NLRP11P59045 1033 aaKnown RBP2.19□□□□□ -2.06
CLK1-204ENST00000432425 TNNC1P63316 161 aa2.19□□□□□ -2.06
CLK1-204ENST00000432425 BDH1Q02338 343 aa2.19□□□□□ -2.06
CLK1-204ENST00000432425 LRRC63Q05C16 580 aa2.19□□□□□ -2.06
CLK1-204ENST00000432425 FADDQ13158 208 aa2.19□□□□□ -2.06
CLK1-204ENST00000432425 TGFBIQ15582 683 aa2.19□□□□□ -2.06
CLK1-204ENST00000432425 CAMK4Q16566 473 aa2.19□□□□□ -2.06
CLK1-204ENST00000432425 C6orf183Q5T699 404 aa2.19□□□□□ -2.06
CLK1-204ENST00000432425 PRAMEF5Q5TYX0 476 aa2.19□□□□□ -2.06
CLK1-204ENST00000432425 MLIPQ5VWP3 458 aa2.19□□□□□ -2.06
CLK1-204ENST00000432425 PRAMEF6Q5VXH4 476 aa2.19□□□□□ -2.06
CLK1-204ENST00000432425 C1orf94Q6P1W5 598 aa2.19□□□□□ -2.06
CLK1-204ENST00000432425 SLC39A4Q6P5W5 647 aa2.19□□□□□ -2.06
CLK1-204ENST00000432425 COPS6Q7L5N1 327 aa2.19□□□□□ -2.06
CLK1-204ENST00000432425 PAGE2Q7Z2X7 111 aa2.19□□□□□ -2.06
CLK1-204ENST00000432425 VTCN1Q7Z7D3 282 aa2.19□□□□□ -2.06
CLK1-204ENST00000432425 CYP4Z1Q86W10 505 aa2.19□□□□□ -2.06
CLK1-204ENST00000432425 VRK2Q86Y07 508 aa2.19□□□□□ -2.06
CLK1-204ENST00000432425 ITPRIPQ8IWB1 547 aa2.19□□□□□ -2.06
CLK1-204ENST00000432425 ST13P4Q8IZP2 240 aaPredicted RBP2.19□□□□□ -2.06
CLK1-204ENST00000432425 FAM81AQ8TBF8 368 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms