RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 SELENOPP49908 381 aa10.32□□□□□ -0.76
HDAC4-202ENST00000430200 SLC35A1P78382 337 aa10.32□□□□□ -0.76
HDAC4-202ENST00000430200 RGNQ15493 299 aa10.32□□□□□ -0.76
HDAC4-202ENST00000430200 GSTA3Q16772 222 aa10.32□□□□□ -0.76
HDAC4-202ENST00000430200 HIKESHIQ53FT3 197 aa10.32□□□□□ -0.76
HDAC4-202ENST00000430200 PAGE3Q5JUK9 113 aa10.32□□□□□ -0.76
HDAC4-202ENST00000430200 ATG16L1Q676U5 607 aa10.32□□□□□ -0.76
HDAC4-202ENST00000430200 MSANTD1Q6ZTZ1 278 aa10.32□□□□□ -0.76
HDAC4-202ENST00000430200 PEX5LQ8IYB4 626 aa10.32□□□□□ -0.76
HDAC4-202ENST00000430200 PIAS4Q8N2W9 510 aaPredicted RBP10.32□□□□□ -0.76
HDAC4-202ENST00000430200 TMEM45BQ96B21 275 aa10.32□□□□□ -0.76
HDAC4-202ENST00000430200 DDIT4LQ96D03 193 aa10.32□□□□□ -0.76
HDAC4-202ENST00000430200 ZHX1-C8orf76Q96EF9 292 aa10.32□□□□□ -0.76
HDAC4-202ENST00000430200 MUS81Q96NY9 551 aa10.32□□□□□ -0.76
HDAC4-202ENST00000430200 MDFIQ99750 246 aa10.32□□□□□ -0.76
HDAC4-202ENST00000430200 PRR14Q9BWN1 585 aa10.32□□□□□ -0.76
HDAC4-202ENST00000430200 ADPRHL2Q9NX46 363 aa10.32□□□□□ -0.76
HDAC4-202ENST00000430200 B3GAT1Q9P2W7 334 aa10.32□□□□□ -0.76
HDAC4-202ENST00000430200 B3GALT5Q9Y2C3 310 aa10.32□□□□□ -0.76
HDAC4-202ENST00000430200 SLC9A8Q9Y2E8 581 aa10.32□□□□□ -0.76
HDAC4-202ENST00000430200 STAB1Q9NY15 2570 aa10.32□□□□□ -0.76
HDAC4-202ENST00000430200 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.32□□□□□ -0.769e-7■□□□□ 10.5
HDAC4-202ENST00000430200 CIB4A0PJX0 185 aa10.31□□□□□ -0.76
HDAC4-202ENST00000430200 FAM234BA2RU67 622 aa10.31□□□□□ -0.76
HDAC4-202ENST00000430200 ZNF503-AS2A6NEH8 195 aa10.31□□□□□ -0.76
HDAC4-202ENST00000430200 CCT8L1PA6NM43 557 aa10.31□□□□□ -0.76
HDAC4-202ENST00000430200 SLCO1B7G3V0H7 640 aa10.31□□□□□ -0.76
HDAC4-202ENST00000430200 M0R1B8 84 aa10.31□□□□□ -0.76
HDAC4-202ENST00000430200 NR5A2O00482 541 aa10.31□□□□□ -0.76
HDAC4-202ENST00000430200 GPR171O14626 319 aa10.31□□□□□ -0.76
HDAC4-202ENST00000430200 TPST1O60507 370 aa10.31□□□□□ -0.76
HDAC4-202ENST00000430200 TMCC2O75069 709 aa10.31□□□□□ -0.76
HDAC4-202ENST00000430200 FZD7O75084 574 aa10.31□□□□□ -0.76
HDAC4-202ENST00000430200 KRT75O95678 551 aa10.31□□□□□ -0.76
HDAC4-202ENST00000430200 MAGEA8P43361 318 aa10.31□□□□□ -0.76
HDAC4-202ENST00000430200 HTR3AP46098 478 aa10.31□□□□□ -0.76
HDAC4-202ENST00000430200 MRPL19P49406 292 aaKnown RBP10.31□□□□□ -0.76
HDAC4-202ENST00000430200 IDH3AP50213 366 aa10.31□□□□□ -0.76
HDAC4-202ENST00000430200 CRISP3P54108 245 aa10.31□□□□□ -0.76
HDAC4-202ENST00000430200 TUBA1BP68363 451 aa10.31□□□□□ -0.76
HDAC4-202ENST00000430200 TUBA4AP68366 448 aa10.31□□□□□ -0.76
HDAC4-202ENST00000430200 TXNL4AP83876 142 aaKnown RBP10.31□□□□□ -0.76
HDAC4-202ENST00000430200 LRRC74AQ0VAA2 488 aa10.31□□□□□ -0.76
HDAC4-202ENST00000430200 LRIF1Q5T3J3 769 aa10.31□□□□□ -0.76
HDAC4-202ENST00000430200 C1orf140Q5VVS0 124 aa10.31□□□□□ -0.76
HDAC4-202ENST00000430200 TUBA1AQ71U36 451 aa10.31□□□□□ -0.76
HDAC4-202ENST00000430200 CROCCP2Q86T23 111 aa10.31□□□□□ -0.76
HDAC4-202ENST00000430200 EPHX4Q8IUS5 362 aa10.31□□□□□ -0.76
HDAC4-202ENST00000430200 MIER2Q8N344 545 aa10.31□□□□□ -0.76
HDAC4-202ENST00000430200 KDM8Q8N371 416 aa10.31□□□□□ -0.76
HDAC4-202ENST00000430200 NFKBIDQ8NI38 313 aa10.31□□□□□ -0.76
HDAC4-202ENST00000430200 GTPBP3Q969Y2 492 aaKnown RBP10.31□□□□□ -0.76
HDAC4-202ENST00000430200 KTI12Q96EK9 354 aaPredicted RBP10.31□□□□□ -0.76
HDAC4-202ENST00000430200 ITCHQ96J02 903 aa10.31□□□□□ -0.76
HDAC4-202ENST00000430200 C7orf26Q96N11 449 aa10.31□□□□□ -0.76
HDAC4-202ENST00000430200 SPATA9Q9BWV2 254 aa10.31□□□□□ -0.76
HDAC4-202ENST00000430200 CACNG6Q9BXT2 260 aa10.31□□□□□ -0.76
HDAC4-202ENST00000430200 A4GALTQ9NPC4 353 aa10.31□□□□□ -0.76
HDAC4-202ENST00000430200 NGBQ9NPG2 151 aa10.31□□□□□ -0.76
HDAC4-202ENST00000430200 SLC17A5Q9NRA2 495 aa10.31□□□□□ -0.76
HDAC4-202ENST00000430200 NKIRAS1Q9NYS0 192 aa10.31□□□□□ -0.76
HDAC4-202ENST00000430200 VAPAQ9P0L0 249 aa10.31□□□□□ -0.76
HDAC4-202ENST00000430200 A0A096LPI6 279 aa10.3□□□□□ -0.76
HDAC4-202ENST00000430200 CLIC1O00299 241 aa10.3□□□□□ -0.76
HDAC4-202ENST00000430200 GPRIN2O60269 458 aa10.3□□□□□ -0.76
HDAC4-202ENST00000430200 ANP32DO95626 131 aa10.3□□□□□ -0.76
HDAC4-202ENST00000430200 LGI1O95970 557 aa10.3□□□□□ -0.76
HDAC4-202ENST00000430200 ARAFP10398 606 aa10.3□□□□□ -0.76
HDAC4-202ENST00000430200 PNMTP11086 282 aa10.3□□□□□ -0.76
HDAC4-202ENST00000430200 ANXA11P50995 505 aaKnown RBP10.3□□□□□ -0.76
HDAC4-202ENST00000430200 WBP2NLQ6ICG8 309 aa10.3□□□□□ -0.76
HDAC4-202ENST00000430200 GPAT4Q86UL3 456 aa10.3□□□□□ -0.76
HDAC4-202ENST00000430200 P2RY8Q86VZ1 359 aa10.3□□□□□ -0.76
HDAC4-202ENST00000430200 MUCL1Q96DR8 90 aa10.3□□□□□ -0.76
HDAC4-202ENST00000430200 REG4Q9BYZ8 158 aa10.3□□□□□ -0.76
HDAC4-202ENST00000430200 BCL2L10Q9HD36 194 aa10.3□□□□□ -0.76
HDAC4-202ENST00000430200 TCF7L2Q9NQB0 619 aa10.3□□□□□ -0.76
HDAC4-202ENST00000430200 DCTN4Q9UJW0 460 aa10.3□□□□□ -0.76
HDAC4-202ENST00000430200 IGHV1-18A0A0C4DH31 117 aa10.29□□□□□ -0.76
HDAC4-202ENST00000430200 A8MVM7 634 aa10.29□□□□□ -0.76
HDAC4-202ENST00000430200 FAM171A2A8MVW0 826 aa10.29□□□□□ -0.76
HDAC4-202ENST00000430200 TPST2O60704 377 aa10.29□□□□□ -0.76
HDAC4-202ENST00000430200 EIF1BO60739 113 aaKnown RBP10.29□□□□□ -0.76
HDAC4-202ENST00000430200 UPK3AO75631 287 aa10.29□□□□□ -0.76
HDAC4-202ENST00000430200 GPIP06744 558 aa10.29□□□□□ -0.76
HDAC4-202ENST00000430200 CDH2P19022 906 aaPredicted RBP10.29□□□□□ -0.76
HDAC4-202ENST00000430200 CXCR1P25024 350 aa10.29□□□□□ -0.76
HDAC4-202ENST00000430200 TTKP33981 857 aa10.29□□□□□ -0.76
HDAC4-202ENST00000430200 RPS5P46782 204 aaKnown RBP10.29□□□□□ -0.76
HDAC4-202ENST00000430200 SELPLGQ14242 412 aa10.29□□□□□ -0.76
HDAC4-202ENST00000430200 ADRM1Q16186 407 aa10.29□□□□□ -0.76
HDAC4-202ENST00000430200 ZNF311Q5JNZ3 666 aa10.29□□□□□ -0.76
HDAC4-202ENST00000430200 AGBL2Q5U5Z8 902 aa10.29□□□□□ -0.76
HDAC4-202ENST00000430200 BLOC1S3Q6QNY0 202 aa10.29□□□□□ -0.76
HDAC4-202ENST00000430200 SLC22A25Q6T423 547 aa10.29□□□□□ -0.76
HDAC4-202ENST00000430200 C6orf89Q6UWU4 347 aa10.29□□□□□ -0.76
HDAC4-202ENST00000430200 TMEM108Q6UXF1 575 aa10.29□□□□□ -0.76
HDAC4-202ENST00000430200 CREB3L2Q70SY1 520 aa10.29□□□□□ -0.76
HDAC4-202ENST00000430200 AAED1Q7RTV5 226 aa10.29□□□□□ -0.76
HDAC4-202ENST00000430200 TSPYL5Q86VY4 417 aaPredicted RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms