RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 Q6ZTK2 550 aa13.38□□□□□ -0.27
SYNGAP1-203ENST00000428982 ADCK2Q7Z695 626 aa13.38□□□□□ -0.27
SYNGAP1-203ENST00000428982 LRRTM1Q86UE6 522 aa13.38□□□□□ -0.27
SYNGAP1-203ENST00000428982 C17orf64Q86WR6 236 aa13.38□□□□□ -0.27
SYNGAP1-203ENST00000428982 KLBQ86Z14 1044 aa13.38□□□□□ -0.27
SYNGAP1-203ENST00000428982 TBC1D3Q8IZP1 549 aaPredicted RBP13.38□□□□□ -0.27
SYNGAP1-203ENST00000428982 RNF141Q8WVD5 230 aa13.38□□□□□ -0.27
SYNGAP1-203ENST00000428982 MEPEQ9NQ76 525 aaPredicted RBP13.38□□□□□ -0.27
SYNGAP1-203ENST00000428982 THSD1Q9NS62 852 aa13.38□□□□□ -0.27
SYNGAP1-203ENST00000428982 UPB1Q9UBR1 384 aa13.38□□□□□ -0.27
SYNGAP1-203ENST00000428982 SOX15O60248 233 aa13.38□□□□□ -0.27
SYNGAP1-203ENST00000428982 GPR37L1O60883 481 aa13.38□□□□□ -0.27
SYNGAP1-203ENST00000428982 OSMP13725 252 aa13.38□□□□□ -0.27
SYNGAP1-203ENST00000428982 RPS2P15880 293 aaKnown RBP13.38□□□□□ -0.27
SYNGAP1-203ENST00000428982 ABOP16442 354 aa13.38□□□□□ -0.27
SYNGAP1-203ENST00000428982 DBX2Q6ZNG2 339 aa13.38□□□□□ -0.27
SYNGAP1-203ENST00000428982 TTLL10Q6ZVT0 673 aa13.38□□□□□ -0.27
SYNGAP1-203ENST00000428982 SPICQ8N5J4 248 aa13.38□□□□□ -0.27
SYNGAP1-203ENST00000428982 TRAM1L1Q8N609 369 aa13.38□□□□□ -0.27
SYNGAP1-203ENST00000428982 VN1R2Q8NFZ6 395 aa13.38□□□□□ -0.27
SYNGAP1-203ENST00000428982 ATG101Q9BSB4 218 aa13.38□□□□□ -0.27
SYNGAP1-203ENST00000428982 NMNAT1Q9HAN9 279 aaPredicted RBP13.38□□□□□ -0.27
SYNGAP1-203ENST00000428982 C2orf42Q9NWW7 574 aa13.38□□□□□ -0.27
SYNGAP1-203ENST00000428982 MYO10Q9HD67 2058 aa13.38□□□□□ -0.27
SYNGAP1-203ENST00000428982 OR2AG2A6NM03 316 aa13.38□□□□□ -0.27
SYNGAP1-203ENST00000428982 H0YIV9 168 aa13.38□□□□□ -0.27
SYNGAP1-203ENST00000428982 YIF1AO95070 293 aa13.38□□□□□ -0.27
SYNGAP1-203ENST00000428982 PRAMEF12O95522 483 aa13.38□□□□□ -0.27
SYNGAP1-203ENST00000428982 EIF4EP06730 217 aaKnown RBP13.38□□□□□ -0.27
SYNGAP1-203ENST00000428982 TPT1P13693 172 aaKnown RBP13.38□□□□□ -0.27
SYNGAP1-203ENST00000428982 MPIP34949 423 aa13.38□□□□□ -0.27
SYNGAP1-203ENST00000428982 SPINT3P49223 89 aa13.38□□□□□ -0.27
SYNGAP1-203ENST00000428982 ZNF433Q8N7K0 673 aaPredicted RBP13.38□□□□□ -0.27
SYNGAP1-203ENST00000428982 OR6K3Q8NGY3 331 aa13.38□□□□□ -0.27
SYNGAP1-203ENST00000428982 MISP3Q96FF7 219 aa13.38□□□□□ -0.27
SYNGAP1-203ENST00000428982 RIOK2Q9BVS4 552 aaKnown RBP13.38□□□□□ -0.27
SYNGAP1-203ENST00000428982 CYSLTR2Q9NS75 346 aa13.38□□□□□ -0.27
SYNGAP1-203ENST00000428982 CALML5Q9NZT1 146 aa13.38□□□□□ -0.27
SYNGAP1-203ENST00000428982 KLHL9Q9P2J3 617 aa13.38□□□□□ -0.27
SYNGAP1-203ENST00000428982 B4GALT6Q9UBX8 382 aa13.38□□□□□ -0.27
SYNGAP1-203ENST00000428982 MRPS17Q9Y2R5 130 aaKnown RBP13.38□□□□□ -0.27
SYNGAP1-203ENST00000428982 ZNF432O94892 652 aa13.38□□□□□ -0.27
SYNGAP1-203ENST00000428982 MAPK3P27361 379 aaPredicted RBP13.38□□□□□ -0.27
SYNGAP1-203ENST00000428982 PRKXP51817 358 aa13.38□□□□□ -0.27
SYNGAP1-203ENST00000428982 RNASE10Q5GAN6 216 aaKnown RBP13.38□□□□□ -0.27
SYNGAP1-203ENST00000428982 SMIM15Q7Z3B0 74 aa13.38□□□□□ -0.27
SYNGAP1-203ENST00000428982 TMED4Q7Z7H5 227 aa13.38□□□□□ -0.27
SYNGAP1-203ENST00000428982 OR5P2Q8WZ92 322 aa13.38□□□□□ -0.27
SYNGAP1-203ENST00000428982 PCBD2Q9H0N5 130 aa13.38□□□□□ -0.27
SYNGAP1-203ENST00000428982 KCNK12Q9HB15 430 aa13.38□□□□□ -0.27
SYNGAP1-203ENST00000428982 PPT2Q9UMR5 302 aa13.38□□□□□ -0.27
SYNGAP1-203ENST00000428982 NOP16Q9Y3C1 178 aaKnown RBP13.38□□□□□ -0.27
SYNGAP1-203ENST00000428982 SCN2BO60939 215 aa13.37□□□□□ -0.27
SYNGAP1-203ENST00000428982 KAT7O95251 611 aa13.37□□□□□ -0.27
SYNGAP1-203ENST00000428982 SGSHP51688 502 aa13.37□□□□□ -0.27
SYNGAP1-203ENST00000428982 CDH11P55287 796 aa13.37□□□□□ -0.27
SYNGAP1-203ENST00000428982 MELKQ14680 651 aa13.37□□□□□ -0.27
SYNGAP1-203ENST00000428982 BCDIN3DQ7Z5W3 292 aaKnown RBP13.37□□□□□ -0.27
SYNGAP1-203ENST00000428982 OAFQ86UD1 273 aa13.37□□□□□ -0.27
SYNGAP1-203ENST00000428982 SEC11CQ9BY50 192 aa13.37□□□□□ -0.27
SYNGAP1-203ENST00000428982 TMPRSS13Q9BYE2 586 aa13.37□□□□□ -0.27
SYNGAP1-203ENST00000428982 OR2S2Q9NQN1 319 aa13.37□□□□□ -0.27
SYNGAP1-203ENST00000428982 RASL12Q9NYN1 266 aa13.37□□□□□ -0.27
SYNGAP1-203ENST00000428982 CCL27Q9Y4X3 112 aa13.37□□□□□ -0.27
SYNGAP1-203ENST00000428982 LEFTY1O75610 366 aa13.37□□□□□ -0.27
SYNGAP1-203ENST00000428982 SURF2Q15527 256 aaPredicted RBP13.37□□□□□ -0.27
SYNGAP1-203ENST00000428982 NHLRC1Q6VVB1 395 aa13.37□□□□□ -0.27
SYNGAP1-203ENST00000428982 OR14C36Q8NHC7 312 aa13.37□□□□□ -0.27
SYNGAP1-203ENST00000428982 MICU1Q9BPX6 476 aa13.37□□□□□ -0.27
SYNGAP1-203ENST00000428982 TLNRD1Q9H1K6 362 aa13.37□□□□□ -0.27
SYNGAP1-203ENST00000428982 IL17BQ9UHF5 180 aa13.37□□□□□ -0.27
SYNGAP1-203ENST00000428982 FBXL4Q9UKA2 621 aa13.37□□□□□ -0.27
SYNGAP1-203ENST00000428982 NPIPB8E9PQR5 432 aa13.37□□□□□ -0.27
SYNGAP1-203ENST00000428982 PNPP00491 289 aa13.37□□□□□ -0.27
SYNGAP1-203ENST00000428982 IFNGP01579 166 aa13.37□□□□□ -0.27
SYNGAP1-203ENST00000428982 MTNR1AP48039 350 aa13.37□□□□□ -0.27
SYNGAP1-203ENST00000428982 ZNF791Q3KP31 576 aaPredicted RBP13.37□□□□□ -0.27
SYNGAP1-203ENST00000428982 CRB2Q5IJ48 1285 aa13.37□□□□□ -0.27
SYNGAP1-203ENST00000428982 FAM78AQ5JUQ0 283 aa13.37□□□□□ -0.27
SYNGAP1-203ENST00000428982 TMEM220Q6QAJ8 160 aa13.37□□□□□ -0.27
SYNGAP1-203ENST00000428982 UNQ6126/PRO20091Q6UXV3 157 aa13.37□□□□□ -0.27
SYNGAP1-203ENST00000428982 CEACAM19Q7Z692 300 aa13.37□□□□□ -0.27
SYNGAP1-203ENST00000428982 ZNF248Q8NDW4 579 aa13.37□□□□□ -0.27
SYNGAP1-203ENST00000428982 POC1BQ8TC44 478 aa13.37□□□□□ -0.27
SYNGAP1-203ENST00000428982 SP7Q8TDD2 431 aaPredicted RBP13.37□□□□□ -0.27
SYNGAP1-203ENST00000428982 ASB16Q96NS5 453 aa13.37□□□□□ -0.27
SYNGAP1-203ENST00000428982 C1GALT1Q9NS00 363 aa13.37□□□□□ -0.27
SYNGAP1-203ENST00000428982 CD207Q9UJ71 328 aa13.37□□□□□ -0.27
SYNGAP1-203ENST00000428982 MARCH11A6NNE9 402 aa13.36□□□□□ -0.27
SYNGAP1-203ENST00000428982 ZNF587BE7ETH6 402 aa13.36□□□□□ -0.27
SYNGAP1-203ENST00000428982 SLC6A12P48065 614 aa13.36□□□□□ -0.27
SYNGAP1-203ENST00000428982 KCNAB1Q14722 419 aa13.36□□□□□ -0.27
SYNGAP1-203ENST00000428982 VITQ6UXI7 678 aa13.36□□□□□ -0.27
SYNGAP1-203ENST00000428982 SLC36A4Q6YBV0 504 aa13.36□□□□□ -0.27
SYNGAP1-203ENST00000428982 CHST14Q8NCH0 376 aa13.36□□□□□ -0.27
SYNGAP1-203ENST00000428982 FAM71CQ8NEG0 241 aa13.36□□□□□ -0.27
SYNGAP1-203ENST00000428982 OR5D16Q8NGK9 328 aa13.36□□□□□ -0.27
SYNGAP1-203ENST00000428982 GDF2Q9UK05 429 aaPredicted RBP13.36□□□□□ -0.27
SYNGAP1-203ENST00000428982 CPN1P15169 458 aa13.36□□□□□ -0.27
SYNGAP1-203ENST00000428982 IHHQ14623 411 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms