RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 UFM1P61960 85 aa14.42□□□□□ -0.1
VARS-216ENST00000428445 FAM174BQ3ZCQ3 159 aa14.42□□□□□ -0.1
VARS-216ENST00000428445 LINGO2Q7L985 606 aa14.42□□□□□ -0.1
VARS-216ENST00000428445 SPATA19Q7Z5L4 167 aa14.42□□□□□ -0.1
VARS-216ENST00000428445 OR9K2Q8NGE7 335 aa14.42□□□□□ -0.1
VARS-216ENST00000428445 NUF2Q9BZD4 464 aa14.42□□□□□ -0.1
VARS-216ENST00000428445 LPAR3Q9UBY5 353 aa14.42□□□□□ -0.1
VARS-216ENST00000428445 A0A096LPE4 126 aa14.41□□□□□ -0.1
VARS-216ENST00000428445 A0A1W2PPZ6 126 aa14.41□□□□□ -0.1
VARS-216ENST00000428445 LRP5LA4QPB2 252 aa14.41□□□□□ -0.1
VARS-216ENST00000428445 CCDC154A6NI56 674 aa14.41□□□□□ -0.1
VARS-216ENST00000428445 AGAP5A6NIR3 686 aa14.41□□□□□ -0.1
VARS-216ENST00000428445 LIPT2A6NK58 231 aa14.41□□□□□ -0.1
VARS-216ENST00000428445 TM9SF1O15321 606 aa14.41□□□□□ -0.1
VARS-216ENST00000428445 ZNF208O43345 1280 aa14.41□□□□□ -0.1
VARS-216ENST00000428445 BMP4P12644 408 aa14.41□□□□□ -0.1
VARS-216ENST00000428445 APEHP13798 732 aaKnown RBP14.41□□□□□ -0.1
VARS-216ENST00000428445 SLC1A3P43003 542 aa14.41□□□□□ -0.1
VARS-216ENST00000428445 GZMKP49863 264 aa14.41□□□□□ -0.1
VARS-216ENST00000428445 SELENOPP49908 381 aa14.41□□□□□ -0.1
VARS-216ENST00000428445 HPCAP84074 193 aa14.41□□□□□ -0.1
VARS-216ENST00000428445 TGFBR3Q03167 851 aa14.41□□□□□ -0.1
VARS-216ENST00000428445 EPS8Q12929 822 aa14.41□□□□□ -0.1
VARS-216ENST00000428445 MAPK11Q15759 364 aa14.41□□□□□ -0.1
VARS-216ENST00000428445 MRPL2Q5T653 305 aaKnown RBP14.41□□□□□ -0.1
VARS-216ENST00000428445 FAM166AQ6J272 317 aa14.41□□□□□ -0.1
VARS-216ENST00000428445 PAQR6Q6TCH4 344 aa14.41□□□□□ -0.1
VARS-216ENST00000428445 VRK2Q86Y07 508 aa14.41□□□□□ -0.1
VARS-216ENST00000428445 ZCCHC24Q8N2G6 241 aaKnown RBP14.41□□□□□ -0.1
VARS-216ENST00000428445 C17orf78Q8N4C9 275 aa14.41□□□□□ -0.1
VARS-216ENST00000428445 TRIML2Q8N7C3 387 aa14.41□□□□□ -0.1
VARS-216ENST00000428445 C1orf162Q8NEQ5 155 aaPredicted RBP14.41□□□□□ -0.1
VARS-216ENST00000428445 WDR60Q8WVS4 1066 aa14.41□□□□□ -0.1
VARS-216ENST00000428445 TRNT1Q96Q11 434 aaKnown RBP14.41□□□□□ -0.1
VARS-216ENST00000428445 SORT1Q99523 831 aa14.41□□□□□ -0.1
VARS-216ENST00000428445 PIMREGQ9BSJ6 248 aa14.41□□□□□ -0.1
VARS-216ENST00000428445 ADAM19Q9H013 955 aa14.41□□□□□ -0.1
VARS-216ENST00000428445 MTHFD2LQ9H903 347 aaPredicted RBP14.41□□□□□ -0.1
VARS-216ENST00000428445 PNPOQ9NVS9 261 aa14.41□□□□□ -0.1
VARS-216ENST00000428445 ADPRHL2Q9NX46 363 aa14.41□□□□□ -0.1
VARS-216ENST00000428445 BTNL2Q9UIR0 455 aa14.41□□□□□ -0.1
VARS-216ENST00000428445 HAO1Q9UJM8 370 aa14.41□□□□□ -0.1
VARS-216ENST00000428445 KCNS2Q9ULS6 477 aa14.41□□□□□ -0.1
VARS-216ENST00000428445 CFAP73A6NFT4 308 aa14.4□□□□□ -0.1
VARS-216ENST00000428445 FAAHO00519 579 aa14.4□□□□□ -0.1
VARS-216ENST00000428445 WNT11O96014 354 aa14.4□□□□□ -0.1
VARS-216ENST00000428445 TGFAP01135 160 aa14.4□□□□□ -0.1
VARS-216ENST00000428445 CSF3P09919 207 aa14.4□□□□□ -0.1
VARS-216ENST00000428445 ALDOCP09972 364 aaKnown RBP14.4□□□□□ -0.1
VARS-216ENST00000428445 IL7RP16871 459 aa14.4□□□□□ -0.1
VARS-216ENST00000428445 LBPP18428 481 aa14.4□□□□□ -0.1
VARS-216ENST00000428445 PAX7P23759 505 aa14.4□□□□□ -0.1
VARS-216ENST00000428445 CALCRP30988 508 aa14.4□□□□□ -0.1
VARS-216ENST00000428445 S100A3P33764 101 aa14.4□□□□□ -0.1
VARS-216ENST00000428445 SERPINF1P36955 418 aa14.4□□□□□ -0.1
VARS-216ENST00000428445 P2RY4P51582 365 aa14.4□□□□□ -0.1
VARS-216ENST00000428445 VSNL1P62760 191 aa14.4□□□□□ -0.1
VARS-216ENST00000428445 GNA13Q14344 377 aa14.4□□□□□ -0.1
VARS-216ENST00000428445 TBRG1Q3YBR2 411 aa14.4□□□□□ -0.1
VARS-216ENST00000428445 IQCCQ4KMZ1 466 aa14.4□□□□□ -0.1
VARS-216ENST00000428445 WDR93Q6P2C0 686 aa14.4□□□□□ -0.1
VARS-216ENST00000428445 ZNF621Q6ZSS3 439 aa14.4□□□□□ -0.1
VARS-216ENST00000428445 KDM8Q8N371 416 aa14.4□□□□□ -0.1
VARS-216ENST00000428445 CADM2Q8N3J6 435 aa14.4□□□□□ -0.1
VARS-216ENST00000428445 OR1K1Q8NGR3 316 aa14.4□□□□□ -0.1
VARS-216ENST00000428445 AENQ8WTP8 325 aaKnown RBP14.4□□□□□ -0.1
VARS-216ENST00000428445 TMEM45BQ96B21 275 aa14.4□□□□□ -0.1
VARS-216ENST00000428445 PIF1Q9H611 641 aa14.4□□□□□ -0.1
VARS-216ENST00000428445 UPK3AO75631 287 aa14.39□□□□□ -0.11
VARS-216ENST00000428445 KRT33AO76009 404 aa14.39□□□□□ -0.11
VARS-216ENST00000428445 CELA3BP08861 270 aa14.39□□□□□ -0.11
VARS-216ENST00000428445 OR4A8P0C604 315 aa14.39□□□□□ -0.11
VARS-216ENST00000428445 NR2F1P10589 423 aa14.39□□□□□ -0.11
VARS-216ENST00000428445 PRG2P13727 222 aa14.39□□□□□ -0.11
VARS-216ENST00000428445 RPS4Y1P22090 263 aaKnown RBP14.39□□□□□ -0.11
VARS-216ENST00000428445 CXCR1P25024 350 aa14.39□□□□□ -0.11
VARS-216ENST00000428445 IL2RGP31785 369 aa14.39□□□□□ -0.11
VARS-216ENST00000428445 ACAA2P42765 397 aaKnown RBP14.39□□□□□ -0.11
VARS-216ENST00000428445 SLC1A6P48664 564 aa14.39□□□□□ -0.11
VARS-216ENST00000428445 ADIPOQQ15848 244 aa14.39□□□□□ -0.11
VARS-216ENST00000428445 GSTA3Q16772 222 aa14.39□□□□□ -0.11
VARS-216ENST00000428445 TMEM225Q6GV28 225 aa14.39□□□□□ -0.11
VARS-216ENST00000428445 OGFOD2Q6N063 350 aa14.39□□□□□ -0.11
VARS-216ENST00000428445 KLHL24Q6TFL4 600 aa14.39□□□□□ -0.11
VARS-216ENST00000428445 LRRC74BQ6ZQY2 392 aa14.39□□□□□ -0.11
VARS-216ENST00000428445 SLC46A3Q7Z3Q1 461 aa14.39□□□□□ -0.11
VARS-216ENST00000428445 MYPOPQ86VE0 399 aaPredicted RBP14.39□□□□□ -0.11
VARS-216ENST00000428445 MREGQ8N565 214 aa14.39□□□□□ -0.11
VARS-216ENST00000428445 BCL2L2Q92843 193 aaPredicted RBP14.39□□□□□ -0.11
VARS-216ENST00000428445 C1orf159Q96HA4 380 aa14.39□□□□□ -0.11
VARS-216ENST00000428445 BOD1Q96IK1 185 aa14.39□□□□□ -0.11
VARS-216ENST00000428445 CCDC115Q96NT0 180 aa14.39□□□□□ -0.11
VARS-216ENST00000428445 ALKBH3Q96Q83 286 aaPredicted RBP14.39□□□□□ -0.11
VARS-216ENST00000428445 SLC38A2Q96QD8 506 aa14.39□□□□□ -0.11
VARS-216ENST00000428445 PANX1Q96RD7 426 aa14.39□□□□□ -0.11
VARS-216ENST00000428445 BPESC1Q9GZL8 116 aa14.39□□□□□ -0.11
VARS-216ENST00000428445 CA10Q9NS85 328 aa14.39□□□□□ -0.11
VARS-216ENST00000428445 SLC6A13Q9NSD5 602 aa14.39□□□□□ -0.11
VARS-216ENST00000428445 TMEM45AQ9NWC5 275 aa14.39□□□□□ -0.11
VARS-216ENST00000428445 AQP7P3A6NL99 342 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms