RNA–Protein interactions for RNA: ENST00000428153.6

DDR1-235, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,257 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-235ENST00000428153 CROCCP2Q86T23 111 aa15.23■□□□□ 0.03
DDR1-235ENST00000428153 ZNF525Q8N782 197 aa15.23■□□□□ 0.03
DDR1-235ENST00000428153 ZIC4Q8N9L1 334 aa15.23■□□□□ 0.03
DDR1-235ENST00000428153 DNAJA3Q96EY1 480 aa15.23■□□□□ 0.03
DDR1-235ENST00000428153 ZBTB18Q99592 522 aa15.23■□□□□ 0.03
DDR1-235ENST00000428153 THUMPD1Q9NXG2 353 aaKnown RBP15.23■□□□□ 0.03
DDR1-235ENST00000428153 P2RX2Q9UBL9 471 aa15.23■□□□□ 0.03
DDR1-235ENST00000428153 GPR45Q9Y5Y3 372 aa15.23■□□□□ 0.03
DDR1-235ENST00000428153 ATP23Q9Y6H3 246 aa15.23■□□□□ 0.03
DDR1-235ENST00000428153 ARFGEF3Q5TH69 2177 aa15.23■□□□□ 0.03
DDR1-235ENST00000428153 A8MVM7 634 aa15.22■□□□□ 0.03
DDR1-235ENST00000428153 SDHDO14521 159 aa15.22■□□□□ 0.03
DDR1-235ENST00000428153 RFXANKO14593 260 aa15.22■□□□□ 0.03
DDR1-235ENST00000428153 HDAC3O15379 428 aa15.22■□□□□ 0.03
DDR1-235ENST00000428153 F12P00748 615 aaPredicted RBP15.22■□□□□ 0.03
DDR1-235ENST00000428153 IL6P05231 212 aa15.22■□□□□ 0.03
DDR1-235ENST00000428153 ZCCHC18P0CG32 403 aa15.22■□□□□ 0.03
DDR1-235ENST00000428153 IL12AP29459 219 aa15.22■□□□□ 0.03
DDR1-235ENST00000428153 COPZ1P61923 177 aa15.22■□□□□ 0.03
DDR1-235ENST00000428153 SLC25A3Q00325 362 aa15.22■□□□□ 0.03
DDR1-235ENST00000428153 SWI5Q1ZZU3 235 aa15.22■□□□□ 0.03
DDR1-235ENST00000428153 RNF220Q5VTB9 566 aa15.22■□□□□ 0.03
DDR1-235ENST00000428153 WBP2NLQ6ICG8 309 aa15.22■□□□□ 0.03
DDR1-235ENST00000428153 AAED1Q7RTV5 226 aa15.22■□□□□ 0.03
DDR1-235ENST00000428153 HMGN2P46Q86SG4 172 aa15.22■□□□□ 0.03
DDR1-235ENST00000428153 FBXO9Q9UK97 447 aaPredicted RBP15.22■□□□□ 0.03
DDR1-235ENST00000428153 TRPC5OSA6NMA1 111 aa15.21■□□□□ 0.03
DDR1-235ENST00000428153 SLCO1B7G3V0H7 640 aa15.21■□□□□ 0.03
DDR1-235ENST00000428153 PDE5AO76074 875 aa15.21■□□□□ 0.03
DDR1-235ENST00000428153 C1QCP02747 245 aa15.21■□□□□ 0.03
DDR1-235ENST00000428153 HOXB1P14653 301 aaPredicted RBP15.21■□□□□ 0.03
DDR1-235ENST00000428153 ACAA2P42765 397 aaKnown RBP15.21■□□□□ 0.03
DDR1-235ENST00000428153 CDKN2CP42773 168 aa15.21■□□□□ 0.03
DDR1-235ENST00000428153 CRISP3P54108 245 aa15.21■□□□□ 0.03
DDR1-235ENST00000428153 BST1Q10588 318 aa15.21■□□□□ 0.03
DDR1-235ENST00000428153 CEACAM7Q14002 265 aa15.21■□□□□ 0.03
DDR1-235ENST00000428153 MAPK11Q15759 364 aa15.21■□□□□ 0.03
DDR1-235ENST00000428153 COX20Q5RI15 118 aa15.21■□□□□ 0.03
DDR1-235ENST00000428153 C9orf135Q5VTT2 229 aa15.21■□□□□ 0.03
DDR1-235ENST00000428153 CYB5R2Q6BCY4 276 aa15.21■□□□□ 0.03
DDR1-235ENST00000428153 TMEM225Q6GV28 225 aa15.21■□□□□ 0.03
DDR1-235ENST00000428153 MSANTD1Q6ZTZ1 278 aa15.21■□□□□ 0.03
DDR1-235ENST00000428153 TMEM99Q8N816 258 aa15.21■□□□□ 0.03
DDR1-235ENST00000428153 FAM169BQ8N8A8 192 aa15.21■□□□□ 0.03
DDR1-235ENST00000428153 ANKK1Q8NFD2 765 aa15.21■□□□□ 0.03
DDR1-235ENST00000428153 OR52P1PQ8NH57 321 aa15.21■□□□□ 0.03
DDR1-235ENST00000428153 MAGEE2Q8TD90 523 aaPredicted RBP15.21■□□□□ 0.03
DDR1-235ENST00000428153 SLC35B4Q969S0 331 aa15.21■□□□□ 0.03
DDR1-235ENST00000428153 ZNF385AQ96PM9 386 aaKnown RBP15.21■□□□□ 0.03
DDR1-235ENST00000428153 KATNB1Q9BVA0 655 aa15.21■□□□□ 0.03
DDR1-235ENST00000428153 TAPBPLQ9BX59 468 aa15.21■□□□□ 0.03
DDR1-235ENST00000428153 C1QTNF6Q9BXI9 259 aa15.21■□□□□ 0.03
DDR1-235ENST00000428153 ARMC7Q9H6L4 198 aa15.21■□□□□ 0.03
DDR1-235ENST00000428153 MYOZ1Q9NP98 299 aaPredicted RBP15.21■□□□□ 0.03
DDR1-235ENST00000428153 PNPOQ9NVS9 261 aa15.21■□□□□ 0.03
DDR1-235ENST00000428153 THAP1Q9NVV9 213 aa15.21■□□□□ 0.03
DDR1-235ENST00000428153 TMEM45AQ9NWC5 275 aa15.21■□□□□ 0.03
DDR1-235ENST00000428153 FKBP7Q9Y680 259 aa15.21■□□□□ 0.03
DDR1-235ENST00000428153 NPIPB7O75200 414 aa15.2■□□□□ 0.02
DDR1-235ENST00000428153 AKR7A3O95154 331 aa15.2■□□□□ 0.02
DDR1-235ENST00000428153 IDO1P14902 403 aa15.2■□□□□ 0.02
DDR1-235ENST00000428153 USF1P22415 310 aaPredicted RBP15.2■□□□□ 0.02
DDR1-235ENST00000428153 P2RY4P51582 365 aa15.2■□□□□ 0.02
DDR1-235ENST00000428153 MVDP53602 400 aa15.2■□□□□ 0.02
DDR1-235ENST00000428153 MPP2Q14168 576 aa15.2■□□□□ 0.02
DDR1-235ENST00000428153 LARS2Q15031 903 aaKnown RBP15.2■□□□□ 0.02
DDR1-235ENST00000428153 OR7A5Q15622 319 aa15.2■□□□□ 0.02
DDR1-235ENST00000428153 MST1LQ2TV78 715 aa15.2■□□□□ 0.02
DDR1-235ENST00000428153 PDCD4Q53EL6 469 aaKnown RBP15.2■□□□□ 0.02
DDR1-235ENST00000428153 PHC2Q8IXK0 858 aa15.2■□□□□ 0.02
DDR1-235ENST00000428153 STK35Q8TDR2 534 aa15.2■□□□□ 0.02
DDR1-235ENST00000428153 SLC38A2Q96QD8 506 aa15.2■□□□□ 0.02
DDR1-235ENST00000428153 KCNK17Q96T54 332 aa15.2■□□□□ 0.02
DDR1-235ENST00000428153 CRNNQ9UBG3 495 aaPredicted RBP15.2■□□□□ 0.02
DDR1-235ENST00000428153 ZNF232Q9UNY5 417 aa15.2■□□□□ 0.02
DDR1-235ENST00000428153 RASD1Q9Y272 281 aa15.2■□□□□ 0.02
DDR1-235ENST00000428153 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.19■□□□□ 0.021e-7■■■□□ 17.4
DDR1-235ENST00000428153 ARPC4-TTLL3A0A0A6YYG9 625 aa15.19■□□□□ 0.02
DDR1-235ENST00000428153 VWC2LB2RUY7 222 aa15.19■□□□□ 0.02
DDR1-235ENST00000428153 ZNF587BE7ETH6 402 aa15.19■□□□□ 0.02
DDR1-235ENST00000428153 ATP6V1G2-DDX39BF2Z307 99 aa15.19■□□□□ 0.02
DDR1-235ENST00000428153 FRS3O43559 492 aa15.19■□□□□ 0.02
DDR1-235ENST00000428153 FZD7O75084 574 aa15.19■□□□□ 0.02
DDR1-235ENST00000428153 TFPTP0C1Z6 253 aa15.19■□□□□ 0.02
DDR1-235ENST00000428153 GZMKP49863 264 aa15.19■□□□□ 0.02
DDR1-235ENST00000428153 PDLIM4P50479 330 aa15.19■□□□□ 0.02
DDR1-235ENST00000428153 SH3BGRP55822 239 aaPredicted RBP15.19■□□□□ 0.02
DDR1-235ENST00000428153 NME5P56597 212 aa15.19■□□□□ 0.02
DDR1-235ENST00000428153 TBRG1Q3YBR2 411 aa15.19■□□□□ 0.02
DDR1-235ENST00000428153 PRAMEF8Q5VWM4 474 aa15.19■□□□□ 0.02
DDR1-235ENST00000428153 PRAMEF7Q5VXH5 474 aa15.19■□□□□ 0.02
DDR1-235ENST00000428153 ZNF836Q6ZNA1 936 aa15.19■□□□□ 0.02
DDR1-235ENST00000428153 CREB3L2Q70SY1 520 aa15.19■□□□□ 0.02
DDR1-235ENST00000428153 GPAT4Q86UL3 456 aa15.19■□□□□ 0.02
DDR1-235ENST00000428153 OR1K1Q8NGR3 316 aa15.19■□□□□ 0.02
DDR1-235ENST00000428153 NANOS1Q8WY41 292 aaKnown RBP15.19■□□□□ 0.02
DDR1-235ENST00000428153 AURKBQ96GD4 344 aaPredicted RBP15.19■□□□□ 0.02
DDR1-235ENST00000428153 MAELQ96JY0 434 aaKnown RBP15.19■□□□□ 0.02
DDR1-235ENST00000428153 BEX2Q9BXY8 128 aa15.19■□□□□ 0.02
DDR1-235ENST00000428153 LINC00470Q9BZP3 86 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms