RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 VRK2Q86Y07 508 aa8.11□□□□□ -1.11
SMC1A-203ENST00000428014 ARMC8Q8IUR7 673 aa8.11□□□□□ -1.11
SMC1A-203ENST00000428014 TUSC5Q8IXB3 177 aa8.11□□□□□ -1.11
SMC1A-203ENST00000428014 ZZZ3Q8IYH5 903 aa8.11□□□□□ -1.11
SMC1A-203ENST00000428014 CLIP4Q8N3C7 705 aa8.11□□□□□ -1.11
SMC1A-203ENST00000428014 POMGNT2Q8NAT1 580 aa8.11□□□□□ -1.11
SMC1A-203ENST00000428014 MAL2Q969L2 176 aa8.11□□□□□ -1.11
SMC1A-203ENST00000428014 ZBTB9Q96C00 473 aa8.11□□□□□ -1.11
SMC1A-203ENST00000428014 SLC41A3Q96GZ6 507 aa8.11□□□□□ -1.11
SMC1A-203ENST00000428014 RADILQ96JH8 1075 aa8.11□□□□□ -1.11
SMC1A-203ENST00000428014 ARL5BQ96KC2 179 aa8.11□□□□□ -1.11
SMC1A-203ENST00000428014 ARHGDIGQ99819 225 aa8.11□□□□□ -1.11
SMC1A-203ENST00000428014 GPATCH1Q9BRR8 931 aaKnown RBP8.11□□□□□ -1.11
SMC1A-203ENST00000428014 TMEM204Q9BSN7 226 aa8.11□□□□□ -1.11
SMC1A-203ENST00000428014 ZNF426Q9BUY5 554 aa8.11□□□□□ -1.11
SMC1A-203ENST00000428014 TAPBPLQ9BX59 468 aa8.11□□□□□ -1.11
SMC1A-203ENST00000428014 POLDIP3Q9BY77 421 aaKnown RBP8.11□□□□□ -1.11
SMC1A-203ENST00000428014 NSRP1Q9H0G5 558 aaKnown RBP8.11□□□□□ -1.11
SMC1A-203ENST00000428014 IKZF5Q9H5V7 419 aa8.11□□□□□ -1.11
SMC1A-203ENST00000428014 TMEM185BQ9H7F4 350 aa8.11□□□□□ -1.11
SMC1A-203ENST00000428014 PLEKHF2Q9H8W4 249 aa8.11□□□□□ -1.11
SMC1A-203ENST00000428014 TMEM27Q9HBJ8 222 aa8.11□□□□□ -1.11
SMC1A-203ENST00000428014 RLIMQ9NVW2 624 aa8.11□□□□□ -1.11
SMC1A-203ENST00000428014 FAM53CQ9NYF3 392 aa8.11□□□□□ -1.11
SMC1A-203ENST00000428014 SLC13A4Q9UKG4 626 aa8.11□□□□□ -1.11
SMC1A-203ENST00000428014 BAG5Q9UL15 447 aa8.11□□□□□ -1.11
SMC1A-203ENST00000428014 ROS1P08922 2347 aa8.11□□□□□ -1.11
SMC1A-203ENST00000428014 F8P00451 2351 aa8.1□□□□□ -1.11
SMC1A-203ENST00000428014 A0A1W2PNR3 127 aa8.1□□□□□ -1.11
SMC1A-203ENST00000428014 TMEM72A0PK05 275 aa8.1□□□□□ -1.11
SMC1A-203ENST00000428014 DEFB108AA8MXU0 73 aa8.1□□□□□ -1.11
SMC1A-203ENST00000428014 FAM220BPB1ANY3 271 aa8.1□□□□□ -1.11
SMC1A-203ENST00000428014 RPL36A-HNRNPH2H7BZ11 118 aa8.1□□□□□ -1.11
SMC1A-203ENST00000428014 PDLIM1O00151 329 aa8.1□□□□□ -1.11
SMC1A-203ENST00000428014 AP3D1O14617 1153 aa8.1□□□□□ -1.11
SMC1A-203ENST00000428014 MRASO14807 208 aa8.1□□□□□ -1.11
SMC1A-203ENST00000428014 FRS3O43559 492 aa8.1□□□□□ -1.11
SMC1A-203ENST00000428014 CHP2O43745 196 aa8.1□□□□□ -1.11
SMC1A-203ENST00000428014 SNX3O60493 162 aa8.1□□□□□ -1.11
SMC1A-203ENST00000428014 FESP07332 822 aa8.1□□□□□ -1.11
SMC1A-203ENST00000428014 TFPIP10646 304 aa8.1□□□□□ -1.11
SMC1A-203ENST00000428014 PAX1P15863 534 aa8.1□□□□□ -1.11
SMC1A-203ENST00000428014 FPR1P21462 350 aa8.1□□□□□ -1.11
SMC1A-203ENST00000428014 P2RY4P51582 365 aa8.1□□□□□ -1.11
SMC1A-203ENST00000428014 SH3BGRP55822 239 aaPredicted RBP8.1□□□□□ -1.11
SMC1A-203ENST00000428014 NCALDP61601 193 aa8.1□□□□□ -1.11
SMC1A-203ENST00000428014 FAM27E3Q08E93 113 aa8.1□□□□□ -1.11
SMC1A-203ENST00000428014 MMEL1Q495T6 779 aa8.1□□□□□ -1.11
SMC1A-203ENST00000428014 C1orf140Q5VVS0 124 aa8.1□□□□□ -1.11
SMC1A-203ENST00000428014 PAMR1Q6UXH9 720 aa8.1□□□□□ -1.11
SMC1A-203ENST00000428014 CDC20BQ86Y33 519 aa8.1□□□□□ -1.11
SMC1A-203ENST00000428014 LRRC75A-AS1Q8N1F1 130 aa8.1□□□□□ -1.11
SMC1A-203ENST00000428014 FAM169BQ8N8A8 192 aa8.1□□□□□ -1.11
SMC1A-203ENST00000428014 ANKS4BQ8N8V4 417 aa8.1□□□□□ -1.11
SMC1A-203ENST00000428014 NFKBIDQ8NI38 313 aa8.1□□□□□ -1.11
SMC1A-203ENST00000428014 MAGEE2Q8TD90 523 aaPredicted RBP8.1□□□□□ -1.11
SMC1A-203ENST00000428014 POP5Q969H6 163 aaKnown RBP8.1□□□□□ -1.11
SMC1A-203ENST00000428014 APH1AQ96BI3 265 aa8.1□□□□□ -1.11
SMC1A-203ENST00000428014 CMTM5Q96DZ9 223 aa8.1□□□□□ -1.11
SMC1A-203ENST00000428014 MUS81Q96NY9 551 aa8.1□□□□□ -1.11
SMC1A-203ENST00000428014 WFIKKN1Q96NZ8 548 aa8.1□□□□□ -1.11
SMC1A-203ENST00000428014 ECSITQ9BQ95 431 aa8.1□□□□□ -1.11
SMC1A-203ENST00000428014 MED18Q9BUE0 208 aa8.1□□□□□ -1.11
SMC1A-203ENST00000428014 LINC00470Q9BZP3 86 aa8.1□□□□□ -1.11
SMC1A-203ENST00000428014 MYLK2Q9H1R3 596 aa8.1□□□□□ -1.11
SMC1A-203ENST00000428014 OPN3Q9H1Y3 402 aaPredicted RBP8.1□□□□□ -1.11
SMC1A-203ENST00000428014 EFCAB1Q9HAE3 211 aa8.1□□□□□ -1.11
SMC1A-203ENST00000428014 BEX4Q9NWD9 120 aaPredicted RBP8.1□□□□□ -1.11
SMC1A-203ENST00000428014 TAS2R16Q9NYV7 291 aa8.1□□□□□ -1.11
SMC1A-203ENST00000428014 RPS6KB2Q9UBS0 482 aa8.1□□□□□ -1.11
SMC1A-203ENST00000428014 ST6GALNAC2Q9UJ37 374 aa8.1□□□□□ -1.11
SMC1A-203ENST00000428014 MAGED1Q9Y5V3 778 aaPredicted RBP8.1□□□□□ -1.11
SMC1A-203ENST00000428014 FLVCR1Q9Y5Y0 555 aa8.1□□□□□ -1.11
SMC1A-203ENST00000428014 PRRC2AP48634 2157 aaKnown RBP8.1□□□□□ -1.11
SMC1A-203ENST00000428014 CSMD1Q96PZ7 3565 aa8.09□□□□□ -1.11
SMC1A-203ENST00000428014 TRAV36DV7A0A075B6V5 113 aa8.09□□□□□ -1.11
SMC1A-203ENST00000428014 A0A1B0GWA3 101 aa8.09□□□□□ -1.11
SMC1A-203ENST00000428014 ELOA3DA6NLF2 546 aaPredicted RBP8.09□□□□□ -1.11
SMC1A-203ENST00000428014 ZNF814B7Z6K7 855 aa8.09□□□□□ -1.11
SMC1A-203ENST00000428014 M0QX08 132 aa8.09□□□□□ -1.11
SMC1A-203ENST00000428014 ST8SIA5O15466 376 aa8.09□□□□□ -1.11
SMC1A-203ENST00000428014 AKAP8O43823 692 aaKnown RBP8.09□□□□□ -1.11
SMC1A-203ENST00000428014 GMFGO60234 142 aa8.09□□□□□ -1.11
SMC1A-203ENST00000428014 MRPL33O75394 65 aaKnown RBP8.09□□□□□ -1.11
SMC1A-203ENST00000428014 AHSA1O95433 338 aa8.09□□□□□ -1.11
SMC1A-203ENST00000428014 RAF1P04049 648 aa8.09□□□□□ -1.11
SMC1A-203ENST00000428014 IMPDH2P12268 514 aa8.09□□□□□ -1.11
SMC1A-203ENST00000428014 TCEA1P23193 301 aaKnown RBP8.09□□□□□ -1.11
SMC1A-203ENST00000428014 DNAJA1P31689 397 aaKnown RBP8.09□□□□□ -1.11
SMC1A-203ENST00000428014 CPOXP36551 454 aa8.09□□□□□ -1.11
SMC1A-203ENST00000428014 RBM34P42696 430 aaKnown RBP8.09□□□□□ -1.11
SMC1A-203ENST00000428014 SMCPP49901 116 aaPredicted RBP8.09□□□□□ -1.11
SMC1A-203ENST00000428014 RGS8P57771 180 aaPredicted RBP8.09□□□□□ -1.11
SMC1A-203ENST00000428014 SIRPAP78324 504 aa8.09□□□□□ -1.11
SMC1A-203ENST00000428014 EGR4Q05215 589 aa8.09□□□□□ -1.11
SMC1A-203ENST00000428014 FXNQ16595 210 aa8.09□□□□□ -1.11
SMC1A-203ENST00000428014 ELOA3BQ3SY89 546 aa8.09□□□□□ -1.11
SMC1A-203ENST00000428014 ANKDD1AQ495B1 522 aa8.09□□□□□ -1.11
SMC1A-203ENST00000428014 ALG10BQ5I7T1 473 aa8.09□□□□□ -1.11
SMC1A-203ENST00000428014 REP15Q6BDI9 236 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms