RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 POPDC2Q9HBU9 364 aa1.73□□□□□ -2.13
PTPRC-208ENST00000427110 UFSP2Q9NUQ7 469 aa1.73□□□□□ -2.13
PTPRC-208ENST00000427110 NUDT15Q9NV35 164 aa1.73□□□□□ -2.13
PTPRC-208ENST00000427110 B3GNT2Q9NY97 397 aa1.73□□□□□ -2.13
PTPRC-208ENST00000427110 IL36GQ9NZH8 169 aa1.73□□□□□ -2.13
PTPRC-208ENST00000427110 ADAM22Q9P0K1 906 aa1.73□□□□□ -2.13
PTPRC-208ENST00000427110 TBK1Q9UHD2 729 aa1.73□□□□□ -2.13
PTPRC-208ENST00000427110 DCDC2Q9UHG0 476 aa1.73□□□□□ -2.13
PTPRC-208ENST00000427110 PHF11Q9UIL8 331 aa1.73□□□□□ -2.13
PTPRC-208ENST00000427110 BTNL2Q9UIR0 455 aa1.73□□□□□ -2.13
PTPRC-208ENST00000427110 AK6Q9Y3D8 172 aaKnown RBP1.73□□□□□ -2.13
PTPRC-208ENST00000427110 ATP6V0A2Q9Y487 856 aa1.73□□□□□ -2.13
PTPRC-208ENST00000427110 ITSN1Q15811 1721 aa1.73□□□□□ -2.13
PTPRC-208ENST00000427110 PTPRMP28827 1452 aa1.73□□□□□ -2.13
PTPRC-208ENST00000427110 NKTRP30414 1462 aaKnown RBP1.73□□□□□ -2.13
PTPRC-208ENST00000427110 IQSEC2Q5JU85 1478 aa1.73□□□□□ -2.13
PTPRC-208ENST00000427110 RIMS1Q86UR5 1692 aaKnown RBP1.73□□□□□ -2.13
PTPRC-208ENST00000427110 ALKQ9UM73 1620 aa1.73□□□□□ -2.13
PTPRC-208ENST00000427110 NRXN3Q9Y4C0 1643 aa1.73□□□□□ -2.13
PTPRC-208ENST00000427110 ANKRD36BQ8N2N9 1353 aa1.72□□□□□ -2.13
PTPRC-208ENST00000427110 PLEKHH1Q9ULM0 1364 aa1.72□□□□□ -2.13
PTPRC-208ENST00000427110 UBR1Q8IWV7 1749 aa1.72□□□□□ -2.13
PTPRC-208ENST00000427110 NALCNQ8IZF0 1738 aa1.72□□□□□ -2.13
PTPRC-208ENST00000427110 C3P01024 1663 aa1.72□□□□□ -2.13
PTPRC-208ENST00000427110 USP54Q70EL1 1684 aa1.72□□□□□ -2.13
PTPRC-208ENST00000427110 TOPAZ1Q8N9V7 1692 aa1.72□□□□□ -2.13
PTPRC-208ENST00000427110 NLRP1Q9C000 1473 aa1.72□□□□□ -2.13
PTPRC-208ENST00000427110 CD163L1Q9NR16 1453 aa1.72□□□□□ -2.13
PTPRC-208ENST00000427110 A0A0J9YXY3 114 aa1.72□□□□□ -2.13
PTPRC-208ENST00000427110 FAM231BA6NCW3 169 aa1.72□□□□□ -2.13
PTPRC-208ENST00000427110 TRDCB7Z8K6 153 aa1.72□□□□□ -2.13
PTPRC-208ENST00000427110 H0Y9J4 135 aa1.72□□□□□ -2.13
PTPRC-208ENST00000427110 ARPC3O15145 178 aa1.72□□□□□ -2.13
PTPRC-208ENST00000427110 RGS16O15492 202 aaPredicted RBP1.72□□□□□ -2.13
PTPRC-208ENST00000427110 TAPBPO15533 448 aa1.72□□□□□ -2.13
PTPRC-208ENST00000427110 CXCL13O43927 109 aa1.72□□□□□ -2.13
PTPRC-208ENST00000427110 BBOX1O75936 387 aa1.72□□□□□ -2.13
PTPRC-208ENST00000427110 IQCF3P0C7M6 154 aa1.72□□□□□ -2.13
PTPRC-208ENST00000427110 PNMTP11086 282 aa1.72□□□□□ -2.13
PTPRC-208ENST00000427110 IMPDH1P20839 514 aa1.72□□□□□ -2.13
PTPRC-208ENST00000427110 GCAP28676 217 aa1.72□□□□□ -2.13
PTPRC-208ENST00000427110 OTX2P32243 289 aa1.72□□□□□ -2.13
PTPRC-208ENST00000427110 DRD3P35462 400 aa1.72□□□□□ -2.13
PTPRC-208ENST00000427110 UGT1A5P35504 534 aa1.72□□□□□ -2.13
PTPRC-208ENST00000427110 TDO2P48775 406 aa1.72□□□□□ -2.13
PTPRC-208ENST00000427110 PKNOX1P55347 436 aa1.72□□□□□ -2.13
PTPRC-208ENST00000427110 BIDP55957 195 aa1.72□□□□□ -2.13
PTPRC-208ENST00000427110 RIPPLY3P57055 190 aa1.72□□□□□ -2.13
PTPRC-208ENST00000427110 CSNK1G2P78368 415 aa1.72□□□□□ -2.13
PTPRC-208ENST00000427110 EGFEM1PQ0D2K5 195 aa1.72□□□□□ -2.13
PTPRC-208ENST00000427110 GANABQ14697 944 aaKnown RBP1.72□□□□□ -2.13
PTPRC-208ENST00000427110 ARL6IP1Q15041 203 aa1.72□□□□□ -2.13
PTPRC-208ENST00000427110 WDR43Q15061 677 aaKnown RBP eCLIP1.72□□□□□ -2.13
PTPRC-208ENST00000427110 KRTAP13-3Q3SY46 172 aa1.72□□□□□ -2.13
PTPRC-208ENST00000427110 ANKDD1AQ495B1 522 aa1.72□□□□□ -2.13
PTPRC-208ENST00000427110 BEND3Q5T5X7 828 aa1.72□□□□□ -2.13
PTPRC-208ENST00000427110 UNQ9370/PRO34162Q6UXP9 181 aa1.72□□□□□ -2.13
PTPRC-208ENST00000427110 ARL6IP6Q8N6S5 226 aa1.72□□□□□ -2.13
PTPRC-208ENST00000427110 ZNF740Q8NDX6 193 aa1.72□□□□□ -2.13
PTPRC-208ENST00000427110 IPMKQ8NFU5 416 aa1.72□□□□□ -2.13
PTPRC-208ENST00000427110 OR52I1Q8NGK6 324 aa1.72□□□□□ -2.13
PTPRC-208ENST00000427110 OR4D5Q8NGN0 318 aa1.72□□□□□ -2.13
PTPRC-208ENST00000427110 HTR3CQ8WXA8 447 aa1.72□□□□□ -2.13
PTPRC-208ENST00000427110 OR1E3Q8WZA6 343 aa1.72□□□□□ -2.13
PTPRC-208ENST00000427110 ST8SIA1Q92185 356 aa1.72□□□□□ -2.13
PTPRC-208ENST00000427110 PELI1Q96FA3 418 aa1.72□□□□□ -2.13
PTPRC-208ENST00000427110 RPRD1AQ96P16 312 aaPredicted RBP1.72□□□□□ -2.13
PTPRC-208ENST00000427110 TGM7Q96PF1 710 aa1.72□□□□□ -2.13
PTPRC-208ENST00000427110 KLHDC3Q9BQ90 382 aa1.72□□□□□ -2.13
PTPRC-208ENST00000427110 OR51J1Q9H342 316 aa1.72□□□□□ -2.13
PTPRC-208ENST00000427110 SMYD3Q9H7B4 428 aa1.72□□□□□ -2.13
PTPRC-208ENST00000427110 VCPKMTQ9H867 229 aa1.72□□□□□ -2.13
PTPRC-208ENST00000427110 SIGLEC8Q9NYZ4 499 aa1.72□□□□□ -2.13
PTPRC-208ENST00000427110 PIPOXQ9P0Z9 390 aa1.72□□□□□ -2.13
PTPRC-208ENST00000427110 TMCC3Q9ULS5 477 aa1.72□□□□□ -2.13
PTPRC-208ENST00000427110 NAP1L2Q9ULW6 460 aaPredicted RBP1.72□□□□□ -2.13
PTPRC-208ENST00000427110 TRAF3IP3Q9Y228 551 aa1.72□□□□□ -2.13
PTPRC-208ENST00000427110 MEMO1Q9Y316 297 aa1.72□□□□□ -2.13
PTPRC-208ENST00000427110 TECPR2O15040 1411 aa1.72□□□□□ -2.13
PTPRC-208ENST00000427110 RGPD8O14715 1765 aaPredicted RBP1.72□□□□□ -2.13
PTPRC-208ENST00000427110 N4BP2Q86UW6 1770 aaPredicted RBP1.72□□□□□ -2.13
PTPRC-208ENST00000427110 PNPLA6Q8IY17 1366 aa1.72□□□□□ -2.13
PTPRC-208ENST00000427110 ABCC11Q96J66 1382 aa1.72□□□□□ -2.13
PTPRC-208ENST00000427110 FMN2Q9NZ56 1722 aa1.71□□□□□ -2.13
PTPRC-208ENST00000427110 TDRD6O60522 2096 aaKnown RBP1.71□□□□□ -2.13
PTPRC-208ENST00000427110 CPS1P31327 1500 aa1.71□□□□□ -2.14
PTPRC-208ENST00000427110 EVC2Q86UK5 1308 aa1.71□□□□□ -2.14
PTPRC-208ENST00000427110 OBSCNQ5VST9 7968 aa1.71□□□□□ -2.14
PTPRC-208ENST00000427110 A2ML1A8K2U0 1454 aa1.71□□□□□ -2.14
PTPRC-208ENST00000427110 ATP7BP35670 1465 aa1.71□□□□□ -2.14
PTPRC-208ENST00000427110 C15orf38-AP3S2A0A0A6YYH1 394 aa1.71□□□□□ -2.14
PTPRC-208ENST00000427110 GPR89AB7ZAQ6 455 aa1.71□□□□□ -2.14
PTPRC-208ENST00000427110 F5H6K3 240 aa1.71□□□□□ -2.14
PTPRC-208ENST00000427110 PRRG1O14668 218 aa1.71□□□□□ -2.14
PTPRC-208ENST00000427110 ZNF208O43345 1280 aa1.71□□□□□ -2.14
PTPRC-208ENST00000427110 MED7O43513 233 aa1.71□□□□□ -2.14
PTPRC-208ENST00000427110 UGT1A9O60656 530 aa1.71□□□□□ -2.14
PTPRC-208ENST00000427110 PFKFB2O60825 505 aa1.71□□□□□ -2.14
PTPRC-208ENST00000427110 ECI2O75521 394 aa1.71□□□□□ -2.14
PTPRC-208ENST00000427110 ATP5LO75964 103 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms