RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 FCRL1Q96LA6 429 aa12.2□□□□□ -0.46
HDAC6-206ENST00000426196 ZNF385AQ96PM9 386 aaKnown RBP12.2□□□□□ -0.46
HDAC6-206ENST00000426196 SF3B5Q9BWJ5 86 aaKnown RBP12.2□□□□□ -0.46
HDAC6-206ENST00000426196 SLITRK2Q9H156 845 aa12.2□□□□□ -0.46
HDAC6-206ENST00000426196 PIF1Q9H611 641 aa12.2□□□□□ -0.46
HDAC6-206ENST00000426196 BAIAP2L1Q9UHR4 511 aa12.2□□□□□ -0.46
HDAC6-206ENST00000426196 ZNF180Q9UJW8 692 aa12.2□□□□□ -0.46
HDAC6-206ENST00000426196 SLC35A3Q9Y2D2 325 aa12.2□□□□□ -0.46
HDAC6-206ENST00000426196 CCL27Q9Y4X3 112 aa12.2□□□□□ -0.46
HDAC6-206ENST00000426196 CENPVL1A0A0U1RR11 272 aa12.19□□□□□ -0.46
HDAC6-206ENST00000426196 POC1B-GALNT4F8VUJ3 575 aa12.19□□□□□ -0.46
HDAC6-206ENST00000426196 UGT2B17O75795 530 aa12.19□□□□□ -0.46
HDAC6-206ENST00000426196 IMPDH2P12268 514 aa12.19□□□□□ -0.46
HDAC6-206ENST00000426196 CBR1P16152 277 aa12.19□□□□□ -0.46
HDAC6-206ENST00000426196 TCN1P20061 433 aaPredicted RBP12.19□□□□□ -0.46
HDAC6-206ENST00000426196 HTR3AP46098 478 aa12.19□□□□□ -0.46
HDAC6-206ENST00000426196 RPL38P63173 70 aaKnown RBP12.19□□□□□ -0.46
HDAC6-206ENST00000426196 C2orf54Q08AI8 447 aa12.19□□□□□ -0.46
HDAC6-206ENST00000426196 NPRL3Q12980 569 aa12.19□□□□□ -0.46
HDAC6-206ENST00000426196 KRT80Q6KB66 452 aa12.19□□□□□ -0.46
HDAC6-206ENST00000426196 GPAT4Q86UL3 456 aa12.19□□□□□ -0.46
HDAC6-206ENST00000426196 MYPOPQ86VE0 399 aaPredicted RBP12.19□□□□□ -0.46
HDAC6-206ENST00000426196 LCA5Q86VQ0 697 aa12.19□□□□□ -0.46
HDAC6-206ENST00000426196 ZIC4Q8N9L1 334 aa12.19□□□□□ -0.46
HDAC6-206ENST00000426196 FAM71CQ8NEG0 241 aa12.19□□□□□ -0.46
HDAC6-206ENST00000426196 OR5P2Q8WZ92 322 aa12.19□□□□□ -0.46
HDAC6-206ENST00000426196 FUT8Q9BYC5 575 aa12.19□□□□□ -0.46
HDAC6-206ENST00000426196 ZNF665Q9H7R5 613 aa12.19□□□□□ -0.46
HDAC6-206ENST00000426196 KCNE5Q9UJ90 142 aa12.19□□□□□ -0.46
HDAC6-206ENST00000426196 MKLN1Q9UL63 735 aa12.19□□□□□ -0.46
HDAC6-206ENST00000426196 TMED7-TICAM2A0A0A6YYA0 188 aa12.18□□□□□ -0.46
HDAC6-206ENST00000426196 DUXAA6NLW8 204 aa12.18□□□□□ -0.46
HDAC6-206ENST00000426196 SCAMP2O15127 329 aaKnown RBP12.18□□□□□ -0.46
HDAC6-206ENST00000426196 ZNF208O43345 1280 aa12.18□□□□□ -0.46
HDAC6-206ENST00000426196 PLPP2O43688 288 aa12.18□□□□□ -0.46
HDAC6-206ENST00000426196 GSNP06396 782 aa12.18□□□□□ -0.46
HDAC6-206ENST00000426196 GPIP06744 558 aa12.18□□□□□ -0.46
HDAC6-206ENST00000426196 SNRPAP09012 282 aaKnown RBP12.18□□□□□ -0.46
HDAC6-206ENST00000426196 NUDT17P0C025 328 aa12.18□□□□□ -0.46
HDAC6-206ENST00000426196 UROSP10746 265 aa12.18□□□□□ -0.46
HDAC6-206ENST00000426196 NEFHP12036 1026 aa12.18□□□□□ -0.46
HDAC6-206ENST00000426196 ARR3P36575 388 aa12.18□□□□□ -0.46
HDAC6-206ENST00000426196 PGM1P36871 562 aa12.18□□□□□ -0.46
HDAC6-206ENST00000426196 RPL3P39023 403 aaKnown RBP12.18□□□□□ -0.46
HDAC6-206ENST00000426196 NAA20P61599 178 aa12.18□□□□□ -0.46
HDAC6-206ENST00000426196 MRPS11P82912 194 aaKnown RBP12.18□□□□□ -0.46
HDAC6-206ENST00000426196 LSM12Q3MHD2 195 aaKnown RBP12.18□□□□□ -0.46
HDAC6-206ENST00000426196 FAM153CQ494X1 144 aa12.18□□□□□ -0.46
HDAC6-206ENST00000426196 EMBQ6PCB8 327 aa12.18□□□□□ -0.46
HDAC6-206ENST00000426196 GSPT2Q8IYD1 628 aaKnown RBP12.18□□□□□ -0.46
HDAC6-206ENST00000426196 SIGLECL1Q8N7X8 197 aa12.18□□□□□ -0.46
HDAC6-206ENST00000426196 PSMA8Q8TAA3 256 aa12.18□□□□□ -0.46
HDAC6-206ENST00000426196 RNF217Q8TC41 542 aa12.18□□□□□ -0.46
HDAC6-206ENST00000426196 OIT3Q8WWZ8 545 aa12.18□□□□□ -0.46
HDAC6-206ENST00000426196 YIPF5Q969M3 257 aa12.18□□□□□ -0.46
HDAC6-206ENST00000426196 CCDC126Q96EE4 140 aa12.18□□□□□ -0.46
HDAC6-206ENST00000426196 MRPL37Q9BZE1 423 aaKnown RBP12.18□□□□□ -0.46
HDAC6-206ENST00000426196 NOX3Q9HBY0 568 aa12.18□□□□□ -0.46
HDAC6-206ENST00000426196 CRLF2Q9HC73 371 aa12.18□□□□□ -0.46
HDAC6-206ENST00000426196 TMED5Q9Y3A6 229 aa12.18□□□□□ -0.46
HDAC6-206ENST00000426196 TMED7Q9Y3B3 224 aa12.18□□□□□ -0.46
HDAC6-206ENST00000426196 DNAJC9-AS1A6NH13 148 aa12.17□□□□□ -0.46
HDAC6-206ENST00000426196 FCMRO60667 390 aa12.17□□□□□ -0.46
HDAC6-206ENST00000426196 GATA3P23771 443 aa12.17□□□□□ -0.46
HDAC6-206ENST00000426196 ALDH3B1P43353 468 aa12.17□□□□□ -0.46
HDAC6-206ENST00000426196 IDH2P48735 452 aaKnown RBP12.17□□□□□ -0.46
HDAC6-206ENST00000426196 SELENOPP49908 381 aa12.17□□□□□ -0.46
HDAC6-206ENST00000426196 POLR2HP52434 150 aaKnown RBP12.17□□□□□ -0.46
HDAC6-206ENST00000426196 ATP6AP1LQ52LC2 224 aa12.17□□□□□ -0.46
HDAC6-206ENST00000426196 FRMD7Q6ZUT3 714 aa12.17□□□□□ -0.46
HDAC6-206ENST00000426196 C16orf62Q7Z3J2 963 aa12.17□□□□□ -0.46
HDAC6-206ENST00000426196 ARFGAP2Q8N6H7 521 aa12.17□□□□□ -0.46
HDAC6-206ENST00000426196 TMEM99Q8N816 258 aa12.17□□□□□ -0.46
HDAC6-206ENST00000426196 OR7A2PQ8NGA2 310 aa12.17□□□□□ -0.46
HDAC6-206ENST00000426196 DUX5Q96PT3 197 aa12.17□□□□□ -0.46
HDAC6-206ENST00000426196 PKP2Q99959 881 aa12.17□□□□□ -0.46
HDAC6-206ENST00000426196 ZNF350Q9GZX5 532 aa12.17□□□□□ -0.46
HDAC6-206ENST00000426196 NELFAQ9H3P2 528 aa12.17□□□□□ -0.46
HDAC6-206ENST00000426196 SERHL2Q9H4I8 314 aa12.17□□□□□ -0.46
HDAC6-206ENST00000426196 C7orf69Q9H7B7 122 aa12.17□□□□□ -0.46
HDAC6-206ENST00000426196 ATP6V1HQ9UI12 483 aa12.17□□□□□ -0.46
HDAC6-206ENST00000426196 NOX1Q9Y5S8 564 aa12.17□□□□□ -0.46
HDAC6-206ENST00000426196 KMT2CQ8NEZ4 4911 aaKnown RBP12.16□□□□□ -0.46
HDAC6-206ENST00000426196 TMEM72A0PK05 275 aa12.16□□□□□ -0.46
HDAC6-206ENST00000426196 AQP7P3A6NL99 342 aa12.16□□□□□ -0.46
HDAC6-206ENST00000426196 AKR7A3O95154 331 aa12.16□□□□□ -0.46
HDAC6-206ENST00000426196 C6orf47O95873 294 aa12.16□□□□□ -0.46
HDAC6-206ENST00000426196 NR4A1P22736 598 aa12.16□□□□□ -0.46
HDAC6-206ENST00000426196 GCH1P30793 250 aa12.16□□□□□ -0.46
HDAC6-206ENST00000426196 SOAT1P35610 550 aa12.16□□□□□ -0.46
HDAC6-206ENST00000426196 MAP2K6P52564 334 aa12.16□□□□□ -0.46
HDAC6-206ENST00000426196 RPS26P62854 115 aaKnown RBP12.16□□□□□ -0.46
HDAC6-206ENST00000426196 ROR2Q01974 943 aaKnown RBP12.16□□□□□ -0.46
HDAC6-206ENST00000426196 OR7A5Q15622 319 aa12.16□□□□□ -0.46
HDAC6-206ENST00000426196 ARHGAP11BQ3KRB8 267 aa12.16□□□□□ -0.46
HDAC6-206ENST00000426196 RFTN2Q52LD8 501 aaPredicted RBP12.16□□□□□ -0.46
HDAC6-206ENST00000426196 CFAP157Q5JU67 520 aa12.16□□□□□ -0.46
HDAC6-206ENST00000426196 CLEC6AQ6EIG7 209 aa12.16□□□□□ -0.46
HDAC6-206ENST00000426196 TMEM225Q6GV28 225 aa12.16□□□□□ -0.46
HDAC6-206ENST00000426196 NIPAL3Q6P499 406 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms