RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 IFNGP01579 166 aa9.79□□□□□ -0.84
CUX1-205ENST00000425244 SLC35E2P0CK97 266 aa9.79□□□□□ -0.84
CUX1-205ENST00000425244 TRAPPC2P0DI81 140 aa9.79□□□□□ -0.84
CUX1-205ENST00000425244 TRAPPC2BP0DI82 140 aa9.79□□□□□ -0.84
CUX1-205ENST00000425244 PEPDP12955 493 aa9.79□□□□□ -0.84
CUX1-205ENST00000425244 DRD5P21918 477 aa9.79□□□□□ -0.84
CUX1-205ENST00000425244 RPL4P36578 427 aaKnown RBP9.79□□□□□ -0.84
CUX1-205ENST00000425244 MLLT3P42568 568 aaPredicted RBP9.79□□□□□ -0.84
CUX1-205ENST00000425244 SHBQ15464 509 aa9.79□□□□□ -0.84
CUX1-205ENST00000425244 SLC25A35Q3KQZ1 300 aa9.79□□□□□ -0.84
CUX1-205ENST00000425244 CEP78Q5JTW2 689 aa9.79□□□□□ -0.84
CUX1-205ENST00000425244 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.79□□□□□ -0.84
CUX1-205ENST00000425244 TCEAL6Q6IPX3 200 aa9.79□□□□□ -0.84
CUX1-205ENST00000425244 GPALPP1Q8IXQ4 340 aa9.79□□□□□ -0.84
CUX1-205ENST00000425244 LRRC17Q8N6Y2 441 aa9.79□□□□□ -0.84
CUX1-205ENST00000425244 OR5M3Q8NGP4 307 aa9.79□□□□□ -0.84
CUX1-205ENST00000425244 ACOT12Q8WYK0 555 aa9.79□□□□□ -0.84
CUX1-205ENST00000425244 GHSRQ92847 366 aa9.79□□□□□ -0.84
CUX1-205ENST00000425244 TCEAL3Q969E4 200 aa9.79□□□□□ -0.84
CUX1-205ENST00000425244 CTHRC1Q96CG8 243 aa9.79□□□□□ -0.84
CUX1-205ENST00000425244 CCDC86Q9H6F5 360 aaKnown RBP9.79□□□□□ -0.84
CUX1-205ENST00000425244 R4GN57 208 aa9.79□□□□□ -0.84
CUX1-205ENST00000425244 A0A0B4J203 849 aa9.79□□□□□ -0.84
CUX1-205ENST00000425244 EEF1E1O43324 174 aaKnown RBP9.79□□□□□ -0.84
CUX1-205ENST00000425244 LANCL1O43813 399 aa9.79□□□□□ -0.84
CUX1-205ENST00000425244 PTP4A3O75365 173 aa9.79□□□□□ -0.84
CUX1-205ENST00000425244 HLA-DQB1P01920 261 aa9.79□□□□□ -0.84
CUX1-205ENST00000425244 PRKCAP17252 672 aa9.79□□□□□ -0.84
CUX1-205ENST00000425244 ALAS2P22557 587 aa9.79□□□□□ -0.84
CUX1-205ENST00000425244 AVPR2P30518 371 aa9.79□□□□□ -0.84
CUX1-205ENST00000425244 CAPZBP47756 277 aa9.79□□□□□ -0.84
CUX1-205ENST00000425244 P2RX3P56373 397 aa9.79□□□□□ -0.84
CUX1-205ENST00000425244 CDK10Q15131 360 aa9.79□□□□□ -0.84
CUX1-205ENST00000425244 SF3A2Q15428 464 aaKnown RBP9.79□□□□□ -0.84
CUX1-205ENST00000425244 ACSM3Q53FZ2 586 aa9.79□□□□□ -0.84
CUX1-205ENST00000425244 KIRREL2Q6UWL6 708 aa9.79□□□□□ -0.84
CUX1-205ENST00000425244 KRT74Q7RTS7 529 aa9.79□□□□□ -0.84
CUX1-205ENST00000425244 YIPF7Q8N8F6 280 aa9.79□□□□□ -0.84
CUX1-205ENST00000425244 ANGPTL6Q8NI99 470 aa9.79□□□□□ -0.84
CUX1-205ENST00000425244 PRDM9Q9NQV7 894 aa9.79□□□□□ -0.84
CUX1-205ENST00000425244 INPP5EQ9NRR6 644 aa9.79□□□□□ -0.84
CUX1-205ENST00000425244 SUSD2Q9UGT4 822 aa9.79□□□□□ -0.84
CUX1-205ENST00000425244 MRPS7Q9Y2R9 242 aaKnown RBP9.79□□□□□ -0.84
CUX1-205ENST00000425244 ADAM18Q9Y3Q7 739 aa9.79□□□□□ -0.84
CUX1-205ENST00000425244 OR10H1Q9Y4A9 318 aa9.79□□□□□ -0.84
CUX1-205ENST00000425244 IER3IP1Q9Y5U9 82 aa9.79□□□□□ -0.84
CUX1-205ENST00000425244 YES1P07947 543 aa9.78□□□□□ -0.84
CUX1-205ENST00000425244 HIST1H1CP16403 213 aaKnown RBP9.78□□□□□ -0.84
CUX1-205ENST00000425244 MAP3K8P41279 467 aa9.78□□□□□ -0.84
CUX1-205ENST00000425244 ACAA2P42765 397 aaKnown RBP9.78□□□□□ -0.84
CUX1-205ENST00000425244 KCNAB1Q14722 419 aa9.78□□□□□ -0.84
CUX1-205ENST00000425244 ARHGAP11AQ6P4F7 1023 aa9.78□□□□□ -0.84
CUX1-205ENST00000425244 EID2Q8N6I1 236 aa9.78□□□□□ -0.84
CUX1-205ENST00000425244 GATSQ8NAP1 163 aa9.78□□□□□ -0.84
CUX1-205ENST00000425244 TRMT10AQ8TBZ6 339 aaKnown RBP9.78□□□□□ -0.84
CUX1-205ENST00000425244 AIFM2Q9BRQ8 373 aa9.78□□□□□ -0.84
CUX1-205ENST00000425244 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.78□□□□□ -0.84
CUX1-205ENST00000425244 TRIM2Q9C040 744 aa9.78□□□□□ -0.84
CUX1-205ENST00000425244 ERVMER34-1Q9H9K5 563 aa9.78□□□□□ -0.84
CUX1-205ENST00000425244 POMT2Q9UKY4 750 aa9.78□□□□□ -0.84
CUX1-205ENST00000425244 IGHV5-51A0A0C4DH38 117 aa9.78□□□□□ -0.84
CUX1-205ENST00000425244 SMLR1H3BR10 107 aa9.78□□□□□ -0.84
CUX1-205ENST00000425244 TGFBR3LH3BV60 316 aa9.78□□□□□ -0.84
CUX1-205ENST00000425244 ORC5O43913 435 aa9.78□□□□□ -0.84
CUX1-205ENST00000425244 SP9P0CG40 484 aa9.78□□□□□ -0.84
CUX1-205ENST00000425244 GIMD1P0DJR0 217 aa9.78□□□□□ -0.84
CUX1-205ENST00000425244 M6PRP20645 277 aa9.78□□□□□ -0.84
CUX1-205ENST00000425244 GALP22466 123 aa9.78□□□□□ -0.84
CUX1-205ENST00000425244 SLC2A5P22732 501 aa9.78□□□□□ -0.84
CUX1-205ENST00000425244 B2MP61769 119 aa9.78□□□□□ -0.84
CUX1-205ENST00000425244 BTG2P78543 158 aa9.78□□□□□ -0.84
CUX1-205ENST00000425244 LRRC28Q86X40 367 aaPredicted RBP9.78□□□□□ -0.84
CUX1-205ENST00000425244 MCATQ8IVS2 390 aaKnown RBP9.78□□□□□ -0.84
CUX1-205ENST00000425244 GPR135Q8IZ08 494 aa9.78□□□□□ -0.84
CUX1-205ENST00000425244 RCBTB1Q8NDN9 531 aa9.78□□□□□ -0.84
CUX1-205ENST00000425244 RFT1Q96AA3 541 aa9.78□□□□□ -0.84
CUX1-205ENST00000425244 THAP7Q9BT49 309 aaPredicted RBP9.78□□□□□ -0.84
CUX1-205ENST00000425244 GALNT9Q9HCQ5 603 aa9.78□□□□□ -0.84
CUX1-205ENST00000425244 MCUBQ9NWR8 336 aa9.78□□□□□ -0.84
CUX1-205ENST00000425244 FAM221BA6H8Z2 402 aa9.77□□□□□ -0.84
CUX1-205ENST00000425244 MCIDASD6RGH6 385 aa9.77□□□□□ -0.84
CUX1-205ENST00000425244 INMT-MINDY4F8WBC2 141 aa9.77□□□□□ -0.84
CUX1-205ENST00000425244 IMPA2O14732 288 aa9.77□□□□□ -0.84
CUX1-205ENST00000425244 PLPP2O43688 288 aa9.77□□□□□ -0.84
CUX1-205ENST00000425244 ALX3O95076 343 aa9.77□□□□□ -0.84
CUX1-205ENST00000425244 GAAP10253 952 aa9.77□□□□□ -0.84
CUX1-205ENST00000425244 MAOAP21397 527 aa9.77□□□□□ -0.84
CUX1-205ENST00000425244 HLA-DMAP28067 261 aa9.77□□□□□ -0.84
CUX1-205ENST00000425244 EPHA8P29322 1005 aaPredicted RBP9.77□□□□□ -0.84
CUX1-205ENST00000425244 TAS2R43P59537 309 aa9.77□□□□□ -0.84
CUX1-205ENST00000425244 ACTC1P68032 377 aa9.77□□□□□ -0.84
CUX1-205ENST00000425244 ACTA1P68133 377 aa9.77□□□□□ -0.84
CUX1-205ENST00000425244 C19orf47Q8N9M1 422 aaKnown RBP9.77□□□□□ -0.84
CUX1-205ENST00000425244 OR6K6Q8NGW6 343 aa9.77□□□□□ -0.84
CUX1-205ENST00000425244 RNF170Q96K19 258 aa9.77□□□□□ -0.84
CUX1-205ENST00000425244 ARRDC1-AS1Q9H2J1 176 aa9.77□□□□□ -0.84
CUX1-205ENST00000425244 SEMA6CQ9H3T2 930 aa9.77□□□□□ -0.84
CUX1-205ENST00000425244 POLE3Q9NRF9 147 aa9.77□□□□□ -0.84
CUX1-205ENST00000425244 CYSLTR2Q9NS75 346 aa9.77□□□□□ -0.84
CUX1-205ENST00000425244 GNG8Q9UK08 70 aa9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms