RNA–Protein interactions for RNA: ENST00000424964.6

TMEM248-204, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-204ENST00000424964 OTUD3Q5T2D3 398 aaPredicted RBP13.21□□□□□ -0.29
TMEM248-204ENST00000424964 SP5Q6BEB4 398 aaPredicted RBP13.21□□□□□ -0.29
TMEM248-204ENST00000424964 PAQR6Q6TCH4 344 aa13.21□□□□□ -0.29
TMEM248-204ENST00000424964 CYP2R1Q6VVX0 501 aa13.21□□□□□ -0.29
TMEM248-204ENST00000424964 CCDC103Q8IW40 242 aa13.21□□□□□ -0.29
TMEM248-204ENST00000424964 TUSC5Q8IXB3 177 aa13.21□□□□□ -0.29
TMEM248-204ENST00000424964 C10orf53Q8N6V4 93 aa13.21□□□□□ -0.29
TMEM248-204ENST00000424964 TMEM99Q8N816 258 aa13.21□□□□□ -0.29
TMEM248-204ENST00000424964 OR6K3Q8NGY3 331 aa13.21□□□□□ -0.29
TMEM248-204ENST00000424964 PIGXQ8TBF5 258 aa13.21□□□□□ -0.29
TMEM248-204ENST00000424964 TAAR8Q969N4 342 aa13.21□□□□□ -0.29
TMEM248-204ENST00000424964 ZNF775Q96BV0 537 aaPredicted RBP13.21□□□□□ -0.29
TMEM248-204ENST00000424964 SLC7A6OSQ96CW6 309 aaPredicted RBP13.21□□□□□ -0.29
TMEM248-204ENST00000424964 PYURFQ96I23 114 aa13.21□□□□□ -0.29
TMEM248-204ENST00000424964 MPP4Q96JB8 637 aa13.21□□□□□ -0.29
TMEM248-204ENST00000424964 CLPTM1LQ96KA5 538 aa13.21□□□□□ -0.29
TMEM248-204ENST00000424964 PRRC1Q96M27 445 aa13.21□□□□□ -0.29
TMEM248-204ENST00000424964 BTBD10Q9BSF8 475 aa13.21□□□□□ -0.29
TMEM248-204ENST00000424964 TACO1Q9BSH4 297 aaKnown RBP13.21□□□□□ -0.29
TMEM248-204ENST00000424964 TMEM43Q9BTV4 400 aa13.21□□□□□ -0.29
TMEM248-204ENST00000424964 GP6Q9HCN6 339 aa13.21□□□□□ -0.29
TMEM248-204ENST00000424964 C6orf203Q9P0P8 240 aaPredicted RBP13.21□□□□□ -0.29
TMEM248-204ENST00000424964 ACTR3BQ9P1U1 418 aa13.21□□□□□ -0.29
TMEM248-204ENST00000424964 PROCRQ9UNN8 238 aa13.21□□□□□ -0.29
TMEM248-204ENST00000424964 ZNF814B7Z6K7 855 aa13.2□□□□□ -0.3
TMEM248-204ENST00000424964 C19orf84I3L1E1 186 aa13.2□□□□□ -0.3
TMEM248-204ENST00000424964 J3KTA2 159 aa13.2□□□□□ -0.3
TMEM248-204ENST00000424964 MSTNO14793 375 aa13.2□□□□□ -0.3
TMEM248-204ENST00000424964 RAMP1O60894 148 aa13.2□□□□□ -0.3
TMEM248-204ENST00000424964 ATP5HO75947 161 aa13.2□□□□□ -0.3
TMEM248-204ENST00000424964 STAMBPO95630 424 aa13.2□□□□□ -0.3
TMEM248-204ENST00000424964 UQCRC1P31930 480 aa13.2□□□□□ -0.3
TMEM248-204ENST00000424964 RASSF2P50749 326 aa13.2□□□□□ -0.3
TMEM248-204ENST00000424964 H3F3AP84243 136 aa13.2□□□□□ -0.3
TMEM248-204ENST00000424964 TFF3Q07654 80 aa13.2□□□□□ -0.3
TMEM248-204ENST00000424964 ST3GAL3Q11203 375 aa13.2□□□□□ -0.3
TMEM248-204ENST00000424964 TRIM25Q14258 630 aaKnown RBP13.2□□□□□ -0.3
TMEM248-204ENST00000424964 FAM69AQ5T7M9 428 aa13.2□□□□□ -0.3
TMEM248-204ENST00000424964 TMEM225Q6GV28 225 aa13.2□□□□□ -0.3
TMEM248-204ENST00000424964 ABLIM2Q6H8Q1 611 aa13.2□□□□□ -0.3
TMEM248-204ENST00000424964 LINC00114Q6XXX2 140 aa13.2□□□□□ -0.3
TMEM248-204ENST00000424964 WDR88Q6ZMY6 472 aa13.2□□□□□ -0.3
TMEM248-204ENST00000424964 CYP4Z1Q86W10 505 aa13.2□□□□□ -0.3
TMEM248-204ENST00000424964 DHFR2Q86XF0 187 aa13.2□□□□□ -0.3
TMEM248-204ENST00000424964 FAM86B1Q8N7N1 296 aa13.2□□□□□ -0.3
TMEM248-204ENST00000424964 ZNF610Q8N9Z0 462 aa13.2□□□□□ -0.3
TMEM248-204ENST00000424964 CCDC124Q96CT7 223 aaKnown RBP13.2□□□□□ -0.3
TMEM248-204ENST00000424964 ZNF300Q96RE9 604 aaPredicted RBP13.2□□□□□ -0.3
TMEM248-204ENST00000424964 PSD2Q9BQI7 771 aa13.2□□□□□ -0.3
TMEM248-204ENST00000424964 PTDSS2Q9BVG9 487 aa13.2□□□□□ -0.3
TMEM248-204ENST00000424964 FNDC11Q9BVV2 318 aa13.2□□□□□ -0.3
TMEM248-204ENST00000424964 RBM24Q9BX46 236 aaKnown RBP13.2□□□□□ -0.3
TMEM248-204ENST00000424964 OPN3Q9H1Y3 402 aaPredicted RBP13.2□□□□□ -0.3
TMEM248-204ENST00000424964 MUC13Q9H3R2 512 aa13.2□□□□□ -0.3
TMEM248-204ENST00000424964 C12orf49Q9H741 205 aa13.2□□□□□ -0.3
TMEM248-204ENST00000424964 A4GNTQ9UNA3 340 aa13.2□□□□□ -0.3
TMEM248-204ENST00000424964 FAM32AQ9Y421 112 aaKnown RBP13.2□□□□□ -0.3
TMEM248-204ENST00000424964 USP9YO00507 2555 aaPredicted RBP13.2□□□□□ -0.3
TMEM248-204ENST00000424964 A8MXE2 369 aa13.19□□□□□ -0.3
TMEM248-204ENST00000424964 FTCDNL1E5RQL4 147 aa13.19□□□□□ -0.3
TMEM248-204ENST00000424964 KPNA4O00629 521 aaPredicted RBP13.19□□□□□ -0.3
TMEM248-204ENST00000424964 DNAJC8O75937 253 aaPredicted RBP13.19□□□□□ -0.3
TMEM248-204ENST00000424964 THRBP10828 461 aa13.19□□□□□ -0.3
TMEM248-204ENST00000424964 MS4A2Q01362 244 aa13.19□□□□□ -0.3
TMEM248-204ENST00000424964 MFSD13AQ14CX5 517 aa13.19□□□□□ -0.3
TMEM248-204ENST00000424964 PDK3Q15120 406 aa13.19□□□□□ -0.3
TMEM248-204ENST00000424964 HIST2H2BCQ6DN03 193 aa13.19□□□□□ -0.3
TMEM248-204ENST00000424964 NUFIP2Q7Z417 695 aaKnown RBP13.19□□□□□ -0.3
TMEM248-204ENST00000424964 NKAIN4Q8IVV8 208 aa13.19□□□□□ -0.3
TMEM248-204ENST00000424964 RNASE6Q93091 150 aaKnown RBP13.19□□□□□ -0.3
TMEM248-204ENST00000424964 MCUR1Q96AQ8 359 aa13.19□□□□□ -0.3
TMEM248-204ENST00000424964 PRSS27Q9BQR3 290 aa13.19□□□□□ -0.3
TMEM248-204ENST00000424964 BCO1Q9HAY6 547 aa13.19□□□□□ -0.3
TMEM248-204ENST00000424964 NPDC1Q9NQX5 325 aaPredicted RBP13.19□□□□□ -0.3
TMEM248-204ENST00000424964 PLSCR4Q9NRQ2 329 aa13.19□□□□□ -0.3
TMEM248-204ENST00000424964 JKAMPQ9P055 326 aa13.19□□□□□ -0.3
TMEM248-204ENST00000424964 EMC3Q9P0I2 261 aa13.19□□□□□ -0.3
TMEM248-204ENST00000424964 RHCGQ9UBD6 479 aa13.19□□□□□ -0.3
TMEM248-204ENST00000424964 ING1Q9UK53 422 aaPredicted RBP13.19□□□□□ -0.3
TMEM248-204ENST00000424964 ENPP4Q9Y6X5 453 aa13.19□□□□□ -0.3
TMEM248-204ENST00000424964 IGKV3D-15A0A087WSY6 115 aa13.18□□□□□ -0.3
TMEM248-204ENST00000424964 AQP7P3A6NL99 342 aa13.18□□□□□ -0.3
TMEM248-204ENST00000424964 ZNF716A6NP11 495 aa13.18□□□□□ -0.3
TMEM248-204ENST00000424964 ZNF724A8MTY0 619 aa13.18□□□□□ -0.3
TMEM248-204ENST00000424964 hCG_2039718K7EN88 272 aa13.18□□□□□ -0.3
TMEM248-204ENST00000424964 GPR171O14626 319 aa13.18□□□□□ -0.3
TMEM248-204ENST00000424964 CGAP01215 116 aa13.18□□□□□ -0.3
TMEM248-204ENST00000424964 CD8BP10966 210 aa13.18□□□□□ -0.3
TMEM248-204ENST00000424964 ATP6V1B2P21281 511 aa13.18□□□□□ -0.3
TMEM248-204ENST00000424964 GRPRP30550 384 aa13.18□□□□□ -0.3
TMEM248-204ENST00000424964 RBM34P42696 430 aaKnown RBP13.18□□□□□ -0.3
TMEM248-204ENST00000424964 IL1RL1Q01638 556 aa13.18□□□□□ -0.3
TMEM248-204ENST00000424964 EXOC3L2Q2M3D2 409 aa13.18□□□□□ -0.3
TMEM248-204ENST00000424964 FBXL19-AS1Q494R0 122 aa13.18□□□□□ -0.3
TMEM248-204ENST00000424964 GALNT5Q7Z7M9 940 aa13.18□□□□□ -0.3
TMEM248-204ENST00000424964 GPAT4Q86UL3 456 aa13.18□□□□□ -0.3
TMEM248-204ENST00000424964 STK32CQ86UX6 486 aa13.18□□□□□ -0.3
TMEM248-204ENST00000424964 OR6S1Q8NH40 331 aa13.18□□□□□ -0.3
TMEM248-204ENST00000424964 TMEM255BQ8WV15 326 aa13.18□□□□□ -0.3
TMEM248-204ENST00000424964 TMEM239Q8WW34 195 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms