RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 ARMCX1Q9P291 453 aa11.45□□□□□ -0.58
VRK3-203ENST00000424804 SLC13A4Q9UKG4 626 aa11.45□□□□□ -0.58
VRK3-203ENST00000424804 ANGPT4Q9Y264 503 aa11.45□□□□□ -0.58
VRK3-203ENST00000424804 TMED7Q9Y3B3 224 aa11.45□□□□□ -0.58
VRK3-203ENST00000424804 CAPN7Q9Y6W3 813 aa11.45□□□□□ -0.58
VRK3-203ENST00000424804 STAB1Q9NY15 2570 aa11.45□□□□□ -0.58
VRK3-203ENST00000424804 A0A096LNT2 108 aa11.44□□□□□ -0.58
VRK3-203ENST00000424804 TMEM72A0PK05 275 aa11.44□□□□□ -0.58
VRK3-203ENST00000424804 ZNF724A8MTY0 619 aa11.44□□□□□ -0.58
VRK3-203ENST00000424804 RNF223E7ERA6 249 aa11.44□□□□□ -0.58
VRK3-203ENST00000424804 FBP2O00757 339 aa11.44□□□□□ -0.58
VRK3-203ENST00000424804 MRASO14807 208 aa11.44□□□□□ -0.58
VRK3-203ENST00000424804 IGHV4-39P01824 125 aa11.44□□□□□ -0.58
VRK3-203ENST00000424804 FESP07332 822 aa11.44□□□□□ -0.58
VRK3-203ENST00000424804 CD3EP07766 207 aa11.44□□□□□ -0.58
VRK3-203ENST00000424804 BMP2P12643 396 aa11.44□□□□□ -0.58
VRK3-203ENST00000424804 COX5AP20674 150 aa11.44□□□□□ -0.58
VRK3-203ENST00000424804 IGHV1-2P23083 117 aa11.44□□□□□ -0.58
VRK3-203ENST00000424804 CXCR1P25024 350 aa11.44□□□□□ -0.58
VRK3-203ENST00000424804 HTR3AP46098 478 aa11.44□□□□□ -0.58
VRK3-203ENST00000424804 SEC24CP53992 1094 aa11.44□□□□□ -0.58
VRK3-203ENST00000424804 GYS2P54840 703 aa11.44□□□□□ -0.58
VRK3-203ENST00000424804 CSNK2A1P68400 391 aaPredicted RBP11.44□□□□□ -0.58
VRK3-203ENST00000424804 RNF220Q5VTB9 566 aa11.44□□□□□ -0.58
VRK3-203ENST00000424804 REP15Q6BDI9 236 aa11.44□□□□□ -0.58
VRK3-203ENST00000424804 BHLHA15Q7RTS1 189 aaPredicted RBP11.44□□□□□ -0.58
VRK3-203ENST00000424804 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.44□□□□□ -0.58
VRK3-203ENST00000424804 SERPINA11Q86U17 422 aa11.44□□□□□ -0.58
VRK3-203ENST00000424804 DTX2Q86UW9 622 aa11.44□□□□□ -0.58
VRK3-203ENST00000424804 ADGRG3Q86Y34 549 aa11.44□□□□□ -0.58
VRK3-203ENST00000424804 DPP10Q8N608 796 aa11.44□□□□□ -0.58
VRK3-203ENST00000424804 TSPEARQ8WU66 669 aa11.44□□□□□ -0.58
VRK3-203ENST00000424804 SLC25A43Q8WUT9 341 aaPredicted RBP11.44□□□□□ -0.58
VRK3-203ENST00000424804 C10orf82Q8WW14 230 aa11.44□□□□□ -0.58
VRK3-203ENST00000424804 KISS1RQ969F8 398 aaPredicted RBP11.44□□□□□ -0.58
VRK3-203ENST00000424804 FBXW5Q969U6 566 aa11.44□□□□□ -0.58
VRK3-203ENST00000424804 DDIT4LQ96D03 193 aa11.44□□□□□ -0.58
VRK3-203ENST00000424804 ZHX1-C8orf76Q96EF9 292 aa11.44□□□□□ -0.58
VRK3-203ENST00000424804 ELAC2Q9BQ52 826 aaKnown RBP11.44□□□□□ -0.58
VRK3-203ENST00000424804 TACO1Q9BSH4 297 aaKnown RBP11.44□□□□□ -0.58
VRK3-203ENST00000424804 TRAF4Q9BUZ4 470 aaPredicted RBP11.44□□□□□ -0.58
VRK3-203ENST00000424804 SPATA5L1Q9BVQ7 753 aa11.44□□□□□ -0.58
VRK3-203ENST00000424804 GRIP2Q9C0E4 1043 aa11.44□□□□□ -0.58
VRK3-203ENST00000424804 SLCO5A1Q9H2Y9 848 aa11.44□□□□□ -0.58
VRK3-203ENST00000424804 RPS6KB2Q9UBS0 482 aa11.44□□□□□ -0.58
VRK3-203ENST00000424804 OSGIN1Q9UJX0 560 aa11.44□□□□□ -0.58
VRK3-203ENST00000424804 HEATR1Q9H583 2144 aaKnown RBP11.44□□□□□ -0.58
VRK3-203ENST00000424804 IGKV3D-15A0A087WSY6 115 aa11.43□□□□□ -0.58
VRK3-203ENST00000424804 ZNF716A6NP11 495 aa11.43□□□□□ -0.58
VRK3-203ENST00000424804 CLOCKO15516 846 aa11.43□□□□□ -0.58
VRK3-203ENST00000424804 LYZL6O75951 148 aa11.43□□□□□ -0.58
VRK3-203ENST00000424804 OPN1SWP03999 348 aa11.43□□□□□ -0.58
VRK3-203ENST00000424804 ETS2P15036 469 aa11.43□□□□□ -0.58
VRK3-203ENST00000424804 GPX2P18283 190 aa11.43□□□□□ -0.58
VRK3-203ENST00000424804 IL32P24001 234 aa11.43□□□□□ -0.58
VRK3-203ENST00000424804 ACVR1BP36896 505 aa11.43□□□□□ -0.58
VRK3-203ENST00000424804 SLC1A3P43003 542 aa11.43□□□□□ -0.58
VRK3-203ENST00000424804 FOXG1P55316 489 aaPredicted RBP11.43□□□□□ -0.58
VRK3-203ENST00000424804 NCALDP61601 193 aa11.43□□□□□ -0.58
VRK3-203ENST00000424804 RASGEF1BQ0VAM2 473 aa11.43□□□□□ -0.58
VRK3-203ENST00000424804 BNIP2Q12982 314 aa11.43□□□□□ -0.58
VRK3-203ENST00000424804 CYLC2Q14093 348 aaPredicted RBP11.43□□□□□ -0.58
VRK3-203ENST00000424804 TRMT5Q32P41 509 aaKnown RBP11.43□□□□□ -0.58
VRK3-203ENST00000424804 PRAMEF8Q5VWM4 474 aa11.43□□□□□ -0.58
VRK3-203ENST00000424804 PRAMEF7Q5VXH5 474 aa11.43□□□□□ -0.58
VRK3-203ENST00000424804 ABLIM2Q6H8Q1 611 aa11.43□□□□□ -0.58
VRK3-203ENST00000424804 WBP2NLQ6ICG8 309 aa11.43□□□□□ -0.58
VRK3-203ENST00000424804 TMPPEQ6ZT21 453 aa11.43□□□□□ -0.58
VRK3-203ENST00000424804 ARMC8Q8IUR7 673 aa11.43□□□□□ -0.58
VRK3-203ENST00000424804 POU5F2Q8N7G0 328 aa11.43□□□□□ -0.58
VRK3-203ENST00000424804 ZNF433Q8N7K0 673 aaPredicted RBP11.43□□□□□ -0.58
VRK3-203ENST00000424804 C11orf65Q8NCR3 313 aa11.43□□□□□ -0.58
VRK3-203ENST00000424804 HIPK4Q8NE63 616 aa11.43□□□□□ -0.58
VRK3-203ENST00000424804 OR10A6Q8NH74 314 aa11.43□□□□□ -0.58
VRK3-203ENST00000424804 ARL5BQ96KC2 179 aa11.43□□□□□ -0.58
VRK3-203ENST00000424804 ZNF317Q96PQ6 595 aaPredicted RBP11.43□□□□□ -0.58
VRK3-203ENST00000424804 ZNF607Q96SK3 696 aa11.43□□□□□ -0.58
VRK3-203ENST00000424804 POTEKPQ9BYX7 375 aa11.43□□□□□ -0.58
VRK3-203ENST00000424804 REG4Q9BYZ8 158 aa11.43□□□□□ -0.58
VRK3-203ENST00000424804 TMEM38AQ9H6F2 299 aa11.43□□□□□ -0.58
VRK3-203ENST00000424804 ESRP2Q9H6T0 727 aaKnown RBP11.43□□□□□ -0.58
VRK3-203ENST00000424804 BCL2L10Q9HD36 194 aa11.43□□□□□ -0.58
VRK3-203ENST00000424804 MRGBPQ9NV56 204 aa11.43□□□□□ -0.58
VRK3-203ENST00000424804 GDF2Q9UK05 429 aaPredicted RBP11.43□□□□□ -0.58
VRK3-203ENST00000424804 SERPINB7O75635 380 aa11.42□□□□□ -0.58
VRK3-203ENST00000424804 IDUAP35475 653 aa11.42□□□□□ -0.58
VRK3-203ENST00000424804 ACAA2P42765 397 aaKnown RBP11.42□□□□□ -0.58
VRK3-203ENST00000424804 PDK3Q15120 406 aa11.42□□□□□ -0.58
VRK3-203ENST00000424804 ZSWIM7Q19AV6 140 aa11.42□□□□□ -0.58
VRK3-203ENST00000424804 GLIPR1L2Q4G1C9 344 aa11.42□□□□□ -0.58
VRK3-203ENST00000424804 RABL3Q5HYI8 236 aa11.42□□□□□ -0.58
VRK3-203ENST00000424804 C11orf71Q6IPW1 123 aa11.42□□□□□ -0.58
VRK3-203ENST00000424804 CXXC5Q7LFL8 322 aaKnown RBP11.42□□□□□ -0.58
VRK3-203ENST00000424804 CPLX4Q7Z7G2 160 aa11.42□□□□□ -0.58
VRK3-203ENST00000424804 SMYD1Q8NB12 490 aa11.42□□□□□ -0.58
VRK3-203ENST00000424804 PCYOX1LQ8NBM8 494 aa11.42□□□□□ -0.58
VRK3-203ENST00000424804 SLC26A7Q8TE54 656 aa11.42□□□□□ -0.58
VRK3-203ENST00000424804 LRRC58Q96CX6 371 aa11.42□□□□□ -0.58
VRK3-203ENST00000424804 USB1Q9BQ65 265 aaKnown RBP11.42□□□□□ -0.58
VRK3-203ENST00000424804 ECSITQ9BQ95 431 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms