RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 SPENQ96T58 3664 aaKnown RBP10.9□□□□□ -0.66
PTPRN-204ENST00000423636 A0A087WV62 115 aa10.9□□□□□ -0.66
PTPRN-204ENST00000423636 A0A0B4J293 547 aa10.9□□□□□ -0.66
PTPRN-204ENST00000423636 PATE3B3GLJ2 98 aa10.9□□□□□ -0.66
PTPRN-204ENST00000423636 ARHGEF9O43307 516 aa10.9□□□□□ -0.66
PTPRN-204ENST00000423636 UTS2O95399 124 aa10.9□□□□□ -0.66
PTPRN-204ENST00000423636 HLA-DPB1P04440 258 aa10.9□□□□□ -0.66
PTPRN-204ENST00000423636 HK1P19367 917 aa10.9□□□□□ -0.66
PTPRN-204ENST00000423636 CD27P26842 260 aa10.9□□□□□ -0.66
PTPRN-204ENST00000423636 SNRPD2P62316 118 aaKnown RBP10.9□□□□□ -0.66
PTPRN-204ENST00000423636 TBRG1Q3YBR2 411 aa10.9□□□□□ -0.66
PTPRN-204ENST00000423636 TRIQKQ629K1 86 aa10.9□□□□□ -0.66
PTPRN-204ENST00000423636 FAAP20Q6NZ36 180 aa10.9□□□□□ -0.66
PTPRN-204ENST00000423636 RTL4Q6ZR62 310 aa10.9□□□□□ -0.66
PTPRN-204ENST00000423636 OR4M1Q8NGD0 313 aa10.9□□□□□ -0.66
PTPRN-204ENST00000423636 OR10AC1Q8NH08 325 aa10.9□□□□□ -0.66
PTPRN-204ENST00000423636 SLC2A12Q8TD20 617 aa10.9□□□□□ -0.66
PTPRN-204ENST00000423636 DUSP19Q8WTR2 217 aa10.9□□□□□ -0.66
PTPRN-204ENST00000423636 SLC39A7Q92504 469 aa10.9□□□□□ -0.66
PTPRN-204ENST00000423636 SLC35B4Q969S0 331 aa10.9□□□□□ -0.66
PTPRN-204ENST00000423636 TCTN2Q96GX1 697 aa10.9□□□□□ -0.66
PTPRN-204ENST00000423636 STACQ99469 402 aa10.9□□□□□ -0.66
PTPRN-204ENST00000423636 NDC1Q9BTX1 674 aa10.9□□□□□ -0.66
PTPRN-204ENST00000423636 MKKSQ9NPJ1 570 aaPredicted RBP10.9□□□□□ -0.66
PTPRN-204ENST00000423636 NANSQ9NR45 359 aa10.9□□□□□ -0.66
PTPRN-204ENST00000423636 NTMQ9P121 344 aa10.9□□□□□ -0.66
PTPRN-204ENST00000423636 TRBV2A0A0J9YWF9 115 aa10.89□□□□□ -0.67
PTPRN-204ENST00000423636 A0A1W2PR77 199 aa10.89□□□□□ -0.67
PTPRN-204ENST00000423636 PRAMEF2O60811 474 aa10.89□□□□□ -0.67
PTPRN-204ENST00000423636 COQ9O75208 318 aa10.89□□□□□ -0.67
PTPRN-204ENST00000423636 PTP4A3O75365 173 aa10.89□□□□□ -0.67
PTPRN-204ENST00000423636 TFPIP10646 304 aa10.89□□□□□ -0.67
PTPRN-204ENST00000423636 RPS4Y1P22090 263 aaKnown RBP10.89□□□□□ -0.67
PTPRN-204ENST00000423636 GPR135Q8IZ08 494 aa10.89□□□□□ -0.67
PTPRN-204ENST00000423636 ARIH2OSQ8N7S6 290 aa10.89□□□□□ -0.67
PTPRN-204ENST00000423636 ZNF615Q8N8J6 731 aa10.89□□□□□ -0.67
PTPRN-204ENST00000423636 C19orf18Q8NEA5 215 aa10.89□□□□□ -0.67
PTPRN-204ENST00000423636 ABHD4Q8TB40 342 aa10.89□□□□□ -0.67
PTPRN-204ENST00000423636 CHAC2Q8WUX2 184 aa10.89□□□□□ -0.67
PTPRN-204ENST00000423636 ASB12Q8WXK4 309 aa10.89□□□□□ -0.67
PTPRN-204ENST00000423636 SYT4Q9H2B2 425 aa10.89□□□□□ -0.67
PTPRN-204ENST00000423636 KRCC1Q9NPI7 259 aaPredicted RBP10.89□□□□□ -0.67
PTPRN-204ENST00000423636 ENAMQ9NRM1 1142 aa10.89□□□□□ -0.67
PTPRN-204ENST00000423636 PLCL2Q9UPR0 1127 aa10.89□□□□□ -0.67
PTPRN-204ENST00000423636 SAGE2PA6NJ88 616 aa10.89□□□□□ -0.67
PTPRN-204ENST00000423636 H3BML4 177 aa10.89□□□□□ -0.67
PTPRN-204ENST00000423636 SCDO00767 359 aa10.89□□□□□ -0.67
PTPRN-204ENST00000423636 POLR1CO15160 346 aaPredicted RBP10.89□□□□□ -0.67
PTPRN-204ENST00000423636 MPZL1O95297 269 aa10.89□□□□□ -0.67
PTPRN-204ENST00000423636 ARHGEF39Q8N4T4 335 aa10.89□□□□□ -0.67
PTPRN-204ENST00000423636 ENKURQ8TC29 256 aa10.89□□□□□ -0.67
PTPRN-204ENST00000423636 THEM6Q8WUY1 208 aa10.89□□□□□ -0.67
PTPRN-204ENST00000423636 TRIM2Q9C040 744 aa10.89□□□□□ -0.67
PTPRN-204ENST00000423636 ERVMER34-1Q9H9K5 563 aa10.89□□□□□ -0.67
PTPRN-204ENST00000423636 FGF21Q9NSA1 209 aa10.89□□□□□ -0.67
PTPRN-204ENST00000423636 SLC35A3Q9Y2D2 325 aa10.89□□□□□ -0.67
PTPRN-204ENST00000423636 DOCK7Q96N67 2140 aa10.89□□□□□ -0.67
PTPRN-204ENST00000423636 IGKV1D-42A0A075B6H8 117 aa10.89□□□□□ -0.67
PTPRN-204ENST00000423636 MEIOCA2RUB1 952 aa10.89□□□□□ -0.67
PTPRN-204ENST00000423636 G3V3Y1 287 aa10.89□□□□□ -0.67
PTPRN-204ENST00000423636 MAP3K8P41279 467 aa10.89□□□□□ -0.67
PTPRN-204ENST00000423636 EIF1AXP47813 144 aaKnown RBP10.89□□□□□ -0.67
PTPRN-204ENST00000423636 TEKQ02763 1124 aa10.89□□□□□ -0.67
PTPRN-204ENST00000423636 C6orf183Q5T699 404 aa10.89□□□□□ -0.67
PTPRN-204ENST00000423636 PRAMEF8Q5VWM4 474 aa10.89□□□□□ -0.67
PTPRN-204ENST00000423636 PRAMEF7Q5VXH5 474 aa10.89□□□□□ -0.67
PTPRN-204ENST00000423636 ULK3Q6PHR2 472 aa10.89□□□□□ -0.67
PTPRN-204ENST00000423636 LSM14AQ8ND56 463 aaKnown RBP10.89□□□□□ -0.67
PTPRN-204ENST00000423636 OR51A4Q8NGJ6 313 aa10.89□□□□□ -0.67
PTPRN-204ENST00000423636 PELI1Q96FA3 418 aa10.89□□□□□ -0.67
PTPRN-204ENST00000423636 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.89□□□□□ -0.67
PTPRN-204ENST00000423636 PAIP2BQ9ULR5 123 aaKnown RBP10.89□□□□□ -0.67
PTPRN-204ENST00000423636 IL1AP01583 271 aa10.88□□□□□ -0.67
PTPRN-204ENST00000423636 CCR5P51681 352 aa10.88□□□□□ -0.67
PTPRN-204ENST00000423636 SLC37A1P57057 533 aa10.88□□□□□ -0.67
PTPRN-204ENST00000423636 EGR4Q05215 589 aa10.88□□□□□ -0.67
PTPRN-204ENST00000423636 DPY19L4Q7Z388 723 aa10.88□□□□□ -0.67
PTPRN-204ENST00000423636 OR6N2Q8NGY6 317 aa10.88□□□□□ -0.67
PTPRN-204ENST00000423636 BRIX1Q8TDN6 353 aaKnown RBP10.88□□□□□ -0.67
PTPRN-204ENST00000423636 TAAR8Q969N4 342 aa10.88□□□□□ -0.67
PTPRN-204ENST00000423636 LRP4O75096 1905 aa10.88□□□□□ -0.67
PTPRN-204ENST00000423636 MEIS3P1A6NDR6 274 aa10.88□□□□□ -0.67
PTPRN-204ENST00000423636 NSA2O95478 260 aaKnown RBP10.88□□□□□ -0.67
PTPRN-204ENST00000423636 HLA-DOBP13765 273 aa10.88□□□□□ -0.67
PTPRN-204ENST00000423636 IL12BP29460 328 aa10.88□□□□□ -0.67
PTPRN-204ENST00000423636 SLC6A6P31641 620 aa10.88□□□□□ -0.67
PTPRN-204ENST00000423636 NANOS3P60323 173 aaKnown RBP10.88□□□□□ -0.67
PTPRN-204ENST00000423636 MRPS15P82914 257 aaKnown RBP10.88□□□□□ -0.67
PTPRN-204ENST00000423636 GLYR1Q49A26 553 aaPredicted RBP10.88□□□□□ -0.67
PTPRN-204ENST00000423636 C14orf28Q4W4Y0 310 aa10.88□□□□□ -0.67
PTPRN-204ENST00000423636 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.88□□□□□ -0.67
PTPRN-204ENST00000423636 HLA-DQA1Q5Y7H0 255 aa10.88□□□□□ -0.67
PTPRN-204ENST00000423636 GUSBP11Q6P575 273 aa10.88□□□□□ -0.67
PTPRN-204ENST00000423636 C9orf40Q8IXQ3 194 aa10.88□□□□□ -0.67
PTPRN-204ENST00000423636 PM20D2Q8IYS1 436 aa10.88□□□□□ -0.67
PTPRN-204ENST00000423636 GJD3Q8N144 294 aa10.88□□□□□ -0.67
PTPRN-204ENST00000423636 ZSCAN1Q8NBB4 408 aa10.88□□□□□ -0.67
PTPRN-204ENST00000423636 THAP4Q8WY91 577 aa10.88□□□□□ -0.67
PTPRN-204ENST00000423636 AMELYQ99218 206 aa10.88□□□□□ -0.67
PTPRN-204ENST00000423636 TP63Q9H3D4 680 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms