RNA–Protein interactions for RNA: ENST00000422245.5

SQSTM1-203, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-203ENST00000422245 CADM2Q8N3J6 435 aa10.14□□□□□ -0.79
SQSTM1-203ENST00000422245 WDR31Q8NA23 367 aa10.14□□□□□ -0.79
SQSTM1-203ENST00000422245 MAPK1IP1LQ8NDC0 245 aa10.14□□□□□ -0.79
SQSTM1-203ENST00000422245 OR9K2Q8NGE7 335 aa10.14□□□□□ -0.79
SQSTM1-203ENST00000422245 SLC38A5Q8WUX1 472 aa10.14□□□□□ -0.79
SQSTM1-203ENST00000422245 TMEM19Q96HH6 336 aa10.14□□□□□ -0.79
SQSTM1-203ENST00000422245 TAPBPLQ9BX59 468 aa10.14□□□□□ -0.79
SQSTM1-203ENST00000422245 FKRPQ9H9S5 495 aa10.14□□□□□ -0.79
SQSTM1-203ENST00000422245 SLC7A10Q9NS82 523 aa10.14□□□□□ -0.79
SQSTM1-203ENST00000422245 SLC6A13Q9NSD5 602 aa10.14□□□□□ -0.79
SQSTM1-203ENST00000422245 RLIMQ9NVW2 624 aa10.14□□□□□ -0.79
SQSTM1-203ENST00000422245 GDF2Q9UK05 429 aaPredicted RBP10.14□□□□□ -0.79
SQSTM1-203ENST00000422245 B3GALT5Q9Y2C3 310 aa10.14□□□□□ -0.79
SQSTM1-203ENST00000422245 A0A0G2JPF8 293 aa10.13□□□□□ -0.79
SQSTM1-203ENST00000422245 HNRNPCL2B2RXH8 293 aa10.13□□□□□ -0.79
SQSTM1-203ENST00000422245 HNRNPCL3B7ZW38 293 aa10.13□□□□□ -0.79
SQSTM1-203ENST00000422245 H7C417 338 aa10.13□□□□□ -0.79
SQSTM1-203ENST00000422245 KLF11O14901 512 aa10.13□□□□□ -0.79
SQSTM1-203ENST00000422245 UBDO15205 165 aa10.13□□□□□ -0.79
SQSTM1-203ENST00000422245 CD5LO43866 347 aa10.13□□□□□ -0.79
SQSTM1-203ENST00000422245 HNRNPCL1O60812 293 aaKnown RBP10.13□□□□□ -0.79
SQSTM1-203ENST00000422245 AKR7A3O95154 331 aa10.13□□□□□ -0.79
SQSTM1-203ENST00000422245 VAMP5O95183 116 aa10.13□□□□□ -0.79
SQSTM1-203ENST00000422245 WNT11O96014 354 aa10.13□□□□□ -0.79
SQSTM1-203ENST00000422245 GKN3PP0CG01 181 aa10.13□□□□□ -0.79
SQSTM1-203ENST00000422245 HNRNPCL4P0DMR1 293 aa10.13□□□□□ -0.79
SQSTM1-203ENST00000422245 BMP4P12644 408 aa10.13□□□□□ -0.79
SQSTM1-203ENST00000422245 NCF2P19878 526 aaPredicted RBP10.13□□□□□ -0.79
SQSTM1-203ENST00000422245 ACAA2P42765 397 aaKnown RBP10.13□□□□□ -0.79
SQSTM1-203ENST00000422245 FABP6P51161 128 aa10.13□□□□□ -0.79
SQSTM1-203ENST00000422245 FOXG1P55316 489 aaPredicted RBP10.13□□□□□ -0.79
SQSTM1-203ENST00000422245 PRPS1P60891 318 aa10.13□□□□□ -0.79
SQSTM1-203ENST00000422245 GTDC1Q4AE62 458 aa10.13□□□□□ -0.79
SQSTM1-203ENST00000422245 SLC9B1Q4ZJI4 515 aa10.13□□□□□ -0.79
SQSTM1-203ENST00000422245 C6orf10Q5SRN2 563 aa10.13□□□□□ -0.79
SQSTM1-203ENST00000422245 C9orf135Q5VTT2 229 aa10.13□□□□□ -0.79
SQSTM1-203ENST00000422245 PRAMEF8Q5VWM4 474 aa10.13□□□□□ -0.79
SQSTM1-203ENST00000422245 PRAMEF7Q5VXH5 474 aa10.13□□□□□ -0.79
SQSTM1-203ENST00000422245 CLEC2AQ6UVW9 174 aa10.13□□□□□ -0.79
SQSTM1-203ENST00000422245 AAED1Q7RTV5 226 aa10.13□□□□□ -0.79
SQSTM1-203ENST00000422245 MAVSQ7Z434 540 aa10.13□□□□□ -0.79
SQSTM1-203ENST00000422245 GPAT4Q86UL3 456 aa10.13□□□□□ -0.79
SQSTM1-203ENST00000422245 MIER2Q8N344 545 aa10.13□□□□□ -0.79
SQSTM1-203ENST00000422245 TMEM99Q8N816 258 aa10.13□□□□□ -0.79
SQSTM1-203ENST00000422245 SLC35B4Q969S0 331 aa10.13□□□□□ -0.79
SQSTM1-203ENST00000422245 ZBTB9Q96C00 473 aa10.13□□□□□ -0.79
SQSTM1-203ENST00000422245 BOD1Q96IK1 185 aa10.13□□□□□ -0.79
SQSTM1-203ENST00000422245 RHNO1Q9BSD3 238 aa10.13□□□□□ -0.79
SQSTM1-203ENST00000422245 SPATA9Q9BWV2 254 aa10.13□□□□□ -0.79
SQSTM1-203ENST00000422245 RAD21L1Q9H4I0 556 aa10.13□□□□□ -0.79
SQSTM1-203ENST00000422245 MANSC1Q9H8J5 431 aa10.13□□□□□ -0.79
SQSTM1-203ENST00000422245 OBP2BQ9NPH6 170 aa10.13□□□□□ -0.79
SQSTM1-203ENST00000422245 ADPRHL2Q9NX46 363 aa10.13□□□□□ -0.79
SQSTM1-203ENST00000422245 IFT52Q9Y366 437 aa10.13□□□□□ -0.79
SQSTM1-203ENST00000422245 COL6A5A8TX70 2615 aa10.12□□□□□ -0.79
SQSTM1-203ENST00000422245 HEATR1Q9H583 2144 aaKnown RBP10.12□□□□□ -0.79
SQSTM1-203ENST00000422245 OR6C65A6NJZ3 312 aa10.12□□□□□ -0.79
SQSTM1-203ENST00000422245 TMEM229AB2RXF0 380 aa10.12□□□□□ -0.79
SQSTM1-203ENST00000422245 ZNF587BE7ETH6 402 aa10.12□□□□□ -0.79
SQSTM1-203ENST00000422245 SSX4O60224 188 aa10.12□□□□□ -0.79
SQSTM1-203ENST00000422245 AHSA1O95433 338 aa10.12□□□□□ -0.79
SQSTM1-203ENST00000422245 CSF3P09919 207 aa10.12□□□□□ -0.79
SQSTM1-203ENST00000422245 PTNP21246 168 aa10.12□□□□□ -0.79
SQSTM1-203ENST00000422245 PAX7P23759 505 aa10.12□□□□□ -0.79
SQSTM1-203ENST00000422245 POLR2JP52435 117 aaKnown RBP10.12□□□□□ -0.79
SQSTM1-203ENST00000422245 MAGOHP61326 146 aaKnown RBP10.12□□□□□ -0.79
SQSTM1-203ENST00000422245 IRX1P78414 480 aaPredicted RBP10.12□□□□□ -0.79
SQSTM1-203ENST00000422245 SLC25A3Q00325 362 aa10.12□□□□□ -0.79
SQSTM1-203ENST00000422245 FADDQ13158 208 aa10.12□□□□□ -0.79
SQSTM1-203ENST00000422245 RAB35Q15286 201 aa10.12□□□□□ -0.79
SQSTM1-203ENST00000422245 RPS26P11Q5JNZ5 115 aaPredicted RBP10.12□□□□□ -0.79
SQSTM1-203ENST00000422245 C1orf140Q5VVS0 124 aa10.12□□□□□ -0.79
SQSTM1-203ENST00000422245 ZIC4Q8N9L1 334 aa10.12□□□□□ -0.79
SQSTM1-203ENST00000422245 OR9I1Q8NGQ6 314 aa10.12□□□□□ -0.79
SQSTM1-203ENST00000422245 BBS10Q8TAM1 723 aa10.12□□□□□ -0.79
SQSTM1-203ENST00000422245 STK35Q8TDR2 534 aa10.12□□□□□ -0.79
SQSTM1-203ENST00000422245 VPS33AQ96AX1 596 aa10.12□□□□□ -0.79
SQSTM1-203ENST00000422245 C3orf49Q96BT1 292 aa10.12□□□□□ -0.79
SQSTM1-203ENST00000422245 TLCD1Q96CP7 247 aa10.12□□□□□ -0.79
SQSTM1-203ENST00000422245 AURKBQ96GD4 344 aaPredicted RBP10.12□□□□□ -0.79
SQSTM1-203ENST00000422245 ZNF385AQ96PM9 386 aaKnown RBP10.12□□□□□ -0.79
SQSTM1-203ENST00000422245 ZNF317Q96PQ6 595 aaPredicted RBP10.12□□□□□ -0.79
SQSTM1-203ENST00000422245 OR52B2Q96RD2 323 aa10.12□□□□□ -0.79
SQSTM1-203ENST00000422245 A4GALTQ9NPC4 353 aa10.12□□□□□ -0.79
SQSTM1-203ENST00000422245 ADAM21Q9UKJ8 722 aa10.12□□□□□ -0.79
SQSTM1-203ENST00000422245 ZNF232Q9UNY5 417 aa10.12□□□□□ -0.79
SQSTM1-203ENST00000422245 RASD1Q9Y272 281 aa10.12□□□□□ -0.79
SQSTM1-203ENST00000422245 ATP23Q9Y6H3 246 aa10.12□□□□□ -0.79
SQSTM1-203ENST00000422245 IGHV4-30-2A0A087WSY4 118 aa10.11□□□□□ -0.79
SQSTM1-203ENST00000422245 ATP6V1G2-DDX39BF2Z307 99 aa10.11□□□□□ -0.79
SQSTM1-203ENST00000422245 NPIPB7O75200 414 aa10.11□□□□□ -0.79
SQSTM1-203ENST00000422245 ERLIN1O75477 346 aa10.11□□□□□ -0.79
SQSTM1-203ENST00000422245 KRT33AO76009 404 aa10.11□□□□□ -0.79
SQSTM1-203ENST00000422245 BMP2P12643 396 aa10.11□□□□□ -0.79
SQSTM1-203ENST00000422245 PRG2P13727 222 aa10.11□□□□□ -0.79
SQSTM1-203ENST00000422245 SLC25A16P16260 332 aa10.11□□□□□ -0.79
SQSTM1-203ENST00000422245 GTF2E2P29084 291 aaKnown RBP10.11□□□□□ -0.79
SQSTM1-203ENST00000422245 MRPL19P49406 292 aaKnown RBP10.11□□□□□ -0.79
SQSTM1-203ENST00000422245 P2RY4P51582 365 aa10.11□□□□□ -0.79
SQSTM1-203ENST00000422245 STX1BP61266 288 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms