RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 ZIM2Q9NZV7 527 aa15.22■□□□□ 0.03
MSH6-203ENST00000420813 FBN1P35555 2871 aaKnown RBP15.22■□□□□ 0.03
MSH6-203ENST00000420813 MXRA5Q9NR99 2828 aa15.21■□□□□ 0.03
MSH6-203ENST00000420813 IGHV4-30-2A0A087WSY4 118 aa15.21■□□□□ 0.03
MSH6-203ENST00000420813 A0A096LPI6 279 aa15.21■□□□□ 0.03
MSH6-203ENST00000420813 A8MVM7 634 aa15.21■□□□□ 0.03
MSH6-203ENST00000420813 AKR7A3O95154 331 aa15.21■□□□□ 0.03
MSH6-203ENST00000420813 ANP32DO95626 131 aa15.21■□□□□ 0.03
MSH6-203ENST00000420813 TFPTP0C1Z6 253 aa15.21■□□□□ 0.03
MSH6-203ENST00000420813 SLC18A1P54219 525 aa15.21■□□□□ 0.03
MSH6-203ENST00000420813 PRPS1P60891 318 aa15.21■□□□□ 0.03
MSH6-203ENST00000420813 DSTNP60981 165 aa15.21■□□□□ 0.03
MSH6-203ENST00000420813 COPZ1P61923 177 aa15.21■□□□□ 0.03
MSH6-203ENST00000420813 RAB35Q15286 201 aa15.21■□□□□ 0.03
MSH6-203ENST00000420813 OR7A5Q15622 319 aa15.21■□□□□ 0.03
MSH6-203ENST00000420813 C9orf135Q5VTT2 229 aa15.21■□□□□ 0.03
MSH6-203ENST00000420813 CLEC2AQ6UVW9 174 aa15.21■□□□□ 0.03
MSH6-203ENST00000420813 CXXC5Q7LFL8 322 aaKnown RBP15.21■□□□□ 0.03
MSH6-203ENST00000420813 AAED1Q7RTV5 226 aa15.21■□□□□ 0.03
MSH6-203ENST00000420813 ABHD12BQ7Z5M8 362 aaPredicted RBP15.21■□□□□ 0.03
MSH6-203ENST00000420813 VRK2Q86Y07 508 aa15.21■□□□□ 0.03
MSH6-203ENST00000420813 ZIC4Q8N9L1 334 aa15.21■□□□□ 0.03
MSH6-203ENST00000420813 RMND5AQ9H871 391 aa15.21■□□□□ 0.03
MSH6-203ENST00000420813 TPT1P8Q9HAU6 139 aa15.21■□□□□ 0.03
MSH6-203ENST00000420813 SDR39U1Q9NRG7 319 aaPredicted RBP15.21■□□□□ 0.03
MSH6-203ENST00000420813 ZNF443Q9Y2A4 671 aaPredicted RBP15.21■□□□□ 0.03
MSH6-203ENST00000420813 A0A096LNT2 108 aa15.2■□□□□ 0.02
MSH6-203ENST00000420813 FAM234BA2RU67 622 aa15.2■□□□□ 0.02
MSH6-203ENST00000420813 ELOA3DA6NLF2 546 aaPredicted RBP15.2■□□□□ 0.02
MSH6-203ENST00000420813 VAMP5O95183 116 aa15.2■□□□□ 0.02
MSH6-203ENST00000420813 WNT11O96014 354 aa15.2■□□□□ 0.02
MSH6-203ENST00000420813 BCHEP06276 602 aa15.2■□□□□ 0.02
MSH6-203ENST00000420813 GKN3PP0CG01 181 aa15.2■□□□□ 0.02
MSH6-203ENST00000420813 KITP10721 976 aa15.2■□□□□ 0.02
MSH6-203ENST00000420813 BMP4P12644 408 aa15.2■□□□□ 0.02
MSH6-203ENST00000420813 ETFAP13804 333 aa15.2■□□□□ 0.02
MSH6-203ENST00000420813 CRATP43155 626 aa15.2■□□□□ 0.02
MSH6-203ENST00000420813 SLC25A3Q00325 362 aa15.2■□□□□ 0.02
MSH6-203ENST00000420813 LARS2Q15031 903 aaKnown RBP15.2■□□□□ 0.02
MSH6-203ENST00000420813 ELOA3BQ3SY89 546 aa15.2■□□□□ 0.02
MSH6-203ENST00000420813 NXNQ6DKJ4 435 aa15.2■□□□□ 0.02
MSH6-203ENST00000420813 KLHL24Q6TFL4 600 aa15.2■□□□□ 0.02
MSH6-203ENST00000420813 HIPK1Q86Z02 1210 aa15.2■□□□□ 0.02
MSH6-203ENST00000420813 CADM2Q8N3J6 435 aa15.2■□□□□ 0.02
MSH6-203ENST00000420813 ELOA3Q8NG57 546 aa15.2■□□□□ 0.02
MSH6-203ENST00000420813 SPATA3Q8NHX4 192 aa15.2■□□□□ 0.02
MSH6-203ENST00000420813 SLC38A5Q8WUX1 472 aa15.2■□□□□ 0.02
MSH6-203ENST00000420813 ITCHQ96J02 903 aa15.2■□□□□ 0.02
MSH6-203ENST00000420813 ZNF385AQ96PM9 386 aaKnown RBP15.2■□□□□ 0.02
MSH6-203ENST00000420813 TAPBPLQ9BX59 468 aa15.2■□□□□ 0.02
MSH6-203ENST00000420813 C1QTNF6Q9BXI9 259 aa15.2■□□□□ 0.02
MSH6-203ENST00000420813 ARMC7Q9H6L4 198 aa15.2■□□□□ 0.02
MSH6-203ENST00000420813 OBP2BQ9NPH6 170 aa15.2■□□□□ 0.02
MSH6-203ENST00000420813 YAE1D1Q9NRH1 226 aa15.2■□□□□ 0.02
MSH6-203ENST00000420813 ZNF232Q9UNY5 417 aa15.2■□□□□ 0.02
MSH6-203ENST00000420813 ATP23Q9Y6H3 246 aa15.2■□□□□ 0.02
MSH6-203ENST00000420813 A0A0G2JPF8 293 aa15.19■□□□□ 0.02
MSH6-203ENST00000420813 TMEM247A6NEH6 219 aa15.19■□□□□ 0.02
MSH6-203ENST00000420813 OR6C65A6NJZ3 312 aa15.19■□□□□ 0.02
MSH6-203ENST00000420813 HNRNPCL2B2RXH8 293 aa15.19■□□□□ 0.02
MSH6-203ENST00000420813 HNRNPCL3B7ZW38 293 aa15.19■□□□□ 0.02
MSH6-203ENST00000420813 FRS3O43559 492 aa15.19■□□□□ 0.02
MSH6-203ENST00000420813 HNRNPCL1O60812 293 aaKnown RBP15.19■□□□□ 0.02
MSH6-203ENST00000420813 HNRNPCL4P0DMR1 293 aa15.19■□□□□ 0.02
MSH6-203ENST00000420813 SLC25A16P16260 332 aa15.19■□□□□ 0.02
MSH6-203ENST00000420813 PAX7P23759 505 aa15.19■□□□□ 0.02
MSH6-203ENST00000420813 APOBEC3AP31941 199 aaPredicted RBP15.19■□□□□ 0.02
MSH6-203ENST00000420813 P2RY4P51582 365 aa15.19■□□□□ 0.02
MSH6-203ENST00000420813 CHRNB3Q05901 458 aa15.19■□□□□ 0.02
MSH6-203ENST00000420813 TMEM225Q6GV28 225 aa15.19■□□□□ 0.02
MSH6-203ENST00000420813 SLC35B4Q969S0 331 aa15.19■□□□□ 0.02
MSH6-203ENST00000420813 TMEM19Q96HH6 336 aa15.19■□□□□ 0.02
MSH6-203ENST00000420813 SPATA9Q9BWV2 254 aa15.19■□□□□ 0.02
MSH6-203ENST00000420813 CACYBPQ9HB71 228 aaKnown RBP15.19■□□□□ 0.02
MSH6-203ENST00000420813 IFT52Q9Y366 437 aa15.19■□□□□ 0.02
MSH6-203ENST00000420813 A8MV72 311 aaPredicted RBP15.18■□□□□ 0.02
MSH6-203ENST00000420813 NPIPB7O75200 414 aa15.18■□□□□ 0.02
MSH6-203ENST00000420813 CSF3P09919 207 aa15.18■□□□□ 0.02
MSH6-203ENST00000420813 LOXL1Q08397 574 aaPredicted RBP15.18■□□□□ 0.02
MSH6-203ENST00000420813 BNIP2Q12982 314 aa15.18■□□□□ 0.02
MSH6-203ENST00000420813 SLC9B1Q4ZJI4 515 aa15.18■□□□□ 0.02
MSH6-203ENST00000420813 C1orf140Q5VVS0 124 aa15.18■□□□□ 0.02
MSH6-203ENST00000420813 PRAMEF8Q5VWM4 474 aa15.18■□□□□ 0.02
MSH6-203ENST00000420813 PRAMEF7Q5VXH5 474 aa15.18■□□□□ 0.02
MSH6-203ENST00000420813 GPAT4Q86UL3 456 aa15.18■□□□□ 0.02
MSH6-203ENST00000420813 LSRQ86X29 649 aaPredicted RBP15.18■□□□□ 0.02
MSH6-203ENST00000420813 CLIP4Q8N3C7 705 aa15.18■□□□□ 0.02
MSH6-203ENST00000420813 MGARPQ8TDB4 240 aa15.18■□□□□ 0.02
MSH6-203ENST00000420813 STK35Q8TDR2 534 aa15.18■□□□□ 0.02
MSH6-203ENST00000420813 C3orf49Q96BT1 292 aa15.18■□□□□ 0.02
MSH6-203ENST00000420813 ZBTB9Q96C00 473 aa15.18■□□□□ 0.02
MSH6-203ENST00000420813 TNFRSF13CQ96RJ3 184 aa15.18■□□□□ 0.02
MSH6-203ENST00000420813 MANSC1Q9H8J5 431 aa15.18■□□□□ 0.02
MSH6-203ENST00000420813 ADPRHL2Q9NX46 363 aa15.18■□□□□ 0.02
MSH6-203ENST00000420813 RASD1Q9Y272 281 aa15.18■□□□□ 0.02
MSH6-203ENST00000420813 CHST2Q9Y4C5 530 aa15.18■□□□□ 0.02
MSH6-203ENST00000420813 PMF1-BGLAPU3KQ54 211 aa15.18■□□□□ 0.02
MSH6-203ENST00000420813 MALRD1Q5VYJ5 2156 aa15.17■□□□□ 0.02
MSH6-203ENST00000420813 TMEM229AB2RXF0 380 aa15.17■□□□□ 0.02
MSH6-203ENST00000420813 ATP6V1G2-DDX39BF2Z307 99 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms