RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 KRTAP1-1Q07627 177 aa9.7□□□□□ -0.86
SSBP3-206ENST00000420121 SPOCK1Q08629 439 aa9.7□□□□□ -0.86
SSBP3-206ENST00000420121 FAPQ12884 760 aa9.7□□□□□ -0.86
SSBP3-206ENST00000420121 FADDQ13158 208 aa9.7□□□□□ -0.86
SSBP3-206ENST00000420121 CEACAM7Q14002 265 aa9.7□□□□□ -0.86
SSBP3-206ENST00000420121 OTUD3Q5T2D3 398 aaPredicted RBP9.7□□□□□ -0.86
SSBP3-206ENST00000420121 TSPO2Q5TGU0 170 aa9.7□□□□□ -0.86
SSBP3-206ENST00000420121 PRAMEF8Q5VWM4 474 aa9.7□□□□□ -0.86
SSBP3-206ENST00000420121 PRAMEF7Q5VXH5 474 aa9.7□□□□□ -0.86
SSBP3-206ENST00000420121 WBP2NLQ6ICG8 309 aa9.7□□□□□ -0.86
SSBP3-206ENST00000420121 CASP12Q6UXS9 341 aa9.7□□□□□ -0.86
SSBP3-206ENST00000420121 DNM1P46Q6ZS02 220 aa9.7□□□□□ -0.86
SSBP3-206ENST00000420121 DTX2Q86UW9 622 aa9.7□□□□□ -0.86
SSBP3-206ENST00000420121 UBE2J2Q8N2K1 259 aa9.7□□□□□ -0.86
SSBP3-206ENST00000420121 WDR31Q8NA23 367 aa9.7□□□□□ -0.86
SSBP3-206ENST00000420121 OR52N5Q8NH56 324 aa9.7□□□□□ -0.86
SSBP3-206ENST00000420121 SMAP2Q8WU79 429 aaPredicted RBP9.7□□□□□ -0.86
SSBP3-206ENST00000420121 TMEM45BQ96B21 275 aa9.7□□□□□ -0.86
SSBP3-206ENST00000420121 CCDC28BQ9BUN5 200 aa9.7□□□□□ -0.86
SSBP3-206ENST00000420121 BDH2Q9BUT1 245 aa9.7□□□□□ -0.86
SSBP3-206ENST00000420121 TRAF4Q9BUZ4 470 aaPredicted RBP9.7□□□□□ -0.86
SSBP3-206ENST00000420121 ASB6Q9NWX5 421 aa9.7□□□□□ -0.86
SSBP3-206ENST00000420121 THUMPD1Q9NXG2 353 aaKnown RBP9.7□□□□□ -0.86
SSBP3-206ENST00000420121 TAS2R16Q9NYV7 291 aa9.7□□□□□ -0.86
SSBP3-206ENST00000420121 VAPAQ9P0L0 249 aa9.7□□□□□ -0.86
SSBP3-206ENST00000420121 SLC9A8Q9Y2E8 581 aa9.7□□□□□ -0.86
SSBP3-206ENST00000420121 HIVEP2P31629 2446 aa9.7□□□□□ -0.86
SSBP3-206ENST00000420121 JMJD1CQ15652 2540 aa9.7□□□□□ -0.86
SSBP3-206ENST00000420121 A8MVM7 634 aa9.69□□□□□ -0.86
SSBP3-206ENST00000420121 FTCDNL1E5RQL4 147 aa9.69□□□□□ -0.86
SSBP3-206ENST00000420121 ABCD4O14678 606 aa9.69□□□□□ -0.86
SSBP3-206ENST00000420121 SMAD7O15105 426 aaKnown RBP9.69□□□□□ -0.86
SSBP3-206ENST00000420121 NDUFS7O75251 213 aa9.69□□□□□ -0.86
SSBP3-206ENST00000420121 UQCRBP14927 111 aa9.69□□□□□ -0.86
SSBP3-206ENST00000420121 SONP18583 2426 aaKnown RBP9.69□□□□□ -0.86
SSBP3-206ENST00000420121 CXCR1P25024 350 aa9.69□□□□□ -0.86
SSBP3-206ENST00000420121 CDKN1AP38936 164 aa9.69□□□□□ -0.86
SSBP3-206ENST00000420121 HOXC5Q00444 222 aa9.69□□□□□ -0.86
SSBP3-206ENST00000420121 LARS2Q15031 903 aaKnown RBP9.69□□□□□ -0.86
SSBP3-206ENST00000420121 OR7A5Q15622 319 aa9.69□□□□□ -0.86
SSBP3-206ENST00000420121 ZSWIM7Q19AV6 140 aa9.69□□□□□ -0.86
SSBP3-206ENST00000420121 ZNF311Q5JNZ3 666 aa9.69□□□□□ -0.86
SSBP3-206ENST00000420121 B3GLCTQ6Y288 498 aa9.69□□□□□ -0.86
SSBP3-206ENST00000420121 CADM2Q8N3J6 435 aa9.69□□□□□ -0.86
SSBP3-206ENST00000420121 OR9K2Q8NGE7 335 aa9.69□□□□□ -0.86
SSBP3-206ENST00000420121 LRRC8CQ8TDW0 803 aa9.69□□□□□ -0.86
SSBP3-206ENST00000420121 MUCL1Q96DR8 90 aa9.69□□□□□ -0.86
SSBP3-206ENST00000420121 SPDL1Q96EA4 605 aa9.69□□□□□ -0.86
SSBP3-206ENST00000420121 NAA11Q9BSU3 229 aaPredicted RBP9.69□□□□□ -0.86
SSBP3-206ENST00000420121 PTDSS2Q9BVG9 487 aa9.69□□□□□ -0.86
SSBP3-206ENST00000420121 SF3B5Q9BWJ5 86 aaKnown RBP9.69□□□□□ -0.86
SSBP3-206ENST00000420121 GRIP2Q9C0E4 1043 aa9.69□□□□□ -0.86
SSBP3-206ENST00000420121 ZNF385DQ9H6B1 395 aa9.69□□□□□ -0.86
SSBP3-206ENST00000420121 CISD1Q9NZ45 108 aaKnown RBP9.69□□□□□ -0.86
SSBP3-206ENST00000420121 CCDC167Q9P0B6 97 aa9.69□□□□□ -0.86
SSBP3-206ENST00000420121 DCTN4Q9UJW0 460 aa9.69□□□□□ -0.86
SSBP3-206ENST00000420121 ABCA1O95477 2261 aa9.68□□□□□ -0.86
SSBP3-206ENST00000420121 A0A1W2PP18 115 aa9.68□□□□□ -0.86
SSBP3-206ENST00000420121 CIB4A0PJX0 185 aa9.68□□□□□ -0.86
SSBP3-206ENST00000420121 E7EQL1 145 aa9.68□□□□□ -0.86
SSBP3-206ENST00000420121 NR5A2O00482 541 aa9.68□□□□□ -0.86
SSBP3-206ENST00000420121 TPST1O60507 370 aa9.68□□□□□ -0.86
SSBP3-206ENST00000420121 IGHV4-39P01824 125 aa9.68□□□□□ -0.86
SSBP3-206ENST00000420121 GPIP06744 558 aa9.68□□□□□ -0.86
SSBP3-206ENST00000420121 ETS2P15036 469 aa9.68□□□□□ -0.86
SSBP3-206ENST00000420121 CD40P25942 277 aa9.68□□□□□ -0.86
SSBP3-206ENST00000420121 HTR2AP28223 471 aa9.68□□□□□ -0.86
SSBP3-206ENST00000420121 ATP4BP51164 291 aa9.68□□□□□ -0.86
SSBP3-206ENST00000420121 ZNF83P51522 516 aa9.68□□□□□ -0.86
SSBP3-206ENST00000420121 AQP5P55064 265 aa9.68□□□□□ -0.86
SSBP3-206ENST00000420121 CDH11P55287 796 aa9.68□□□□□ -0.86
SSBP3-206ENST00000420121 STX1BP61266 288 aa9.68□□□□□ -0.86
SSBP3-206ENST00000420121 LGALS3BPQ08380 585 aa9.68□□□□□ -0.86
SSBP3-206ENST00000420121 TNK1Q13470 666 aa9.68□□□□□ -0.86
SSBP3-206ENST00000420121 ADRM1Q16186 407 aa9.68□□□□□ -0.86
SSBP3-206ENST00000420121 C9orf135Q5VTT2 229 aa9.68□□□□□ -0.86
SSBP3-206ENST00000420121 C1orf140Q5VVS0 124 aa9.68□□□□□ -0.86
SSBP3-206ENST00000420121 C11orf71Q6IPW1 123 aa9.68□□□□□ -0.86
SSBP3-206ENST00000420121 C6orf89Q6UWU4 347 aa9.68□□□□□ -0.86
SSBP3-206ENST00000420121 DLEU7Q6UYE1 221 aa9.68□□□□□ -0.86
SSBP3-206ENST00000420121 LINGO2Q7L985 606 aa9.68□□□□□ -0.86
SSBP3-206ENST00000420121 SSX8Q7RTT4 187 aa9.68□□□□□ -0.86
SSBP3-206ENST00000420121 EPHX4Q8IUS5 362 aa9.68□□□□□ -0.86
SSBP3-206ENST00000420121 GOLGA6L1Q8N7Z2 621 aa9.68□□□□□ -0.86
SSBP3-206ENST00000420121 NFKBIDQ8NI38 313 aa9.68□□□□□ -0.86
SSBP3-206ENST00000420121 BBS10Q8TAM1 723 aa9.68□□□□□ -0.86
SSBP3-206ENST00000420121 SLC35B4Q969S0 331 aa9.68□□□□□ -0.86
SSBP3-206ENST00000420121 BOD1Q96IK1 185 aa9.68□□□□□ -0.86
SSBP3-206ENST00000420121 WFDC6Q9BQY6 131 aa9.68□□□□□ -0.86
SSBP3-206ENST00000420121 RAD21L1Q9H4I0 556 aa9.68□□□□□ -0.86
SSBP3-206ENST00000420121 PIF1Q9H611 641 aa9.68□□□□□ -0.86
SSBP3-206ENST00000420121 SLC17A5Q9NRA2 495 aa9.68□□□□□ -0.86
SSBP3-206ENST00000420121 PARPBPQ9NWS1 579 aa9.68□□□□□ -0.86
SSBP3-206ENST00000420121 SEC14L4Q9UDX3 406 aa9.68□□□□□ -0.86
SSBP3-206ENST00000420121 ZNF232Q9UNY5 417 aa9.68□□□□□ -0.86
SSBP3-206ENST00000420121 IFT52Q9Y366 437 aa9.68□□□□□ -0.86
SSBP3-206ENST00000420121 CHD3Q12873 2000 aaKnown RBP9.68□□□□□ -0.86
SSBP3-206ENST00000420121 IGKV1D-42A0A075B6H8 117 aa9.67□□□□□ -0.86
SSBP3-206ENST00000420121 CCT8L1PA6NM43 557 aa9.67□□□□□ -0.86
SSBP3-206ENST00000420121 FAM171A2A8MVW0 826 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms