RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 STOML2Q9UJZ1 356 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 PCTPQ9UKL6 214 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 RNF6Q9Y252 685 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 MRPS28Q9Y2Q9 187 aaKnown RBP2.33□□□□□ -2.04
VPS41-206ENST00000418457 KLK4Q9Y5K2 254 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 GMPPBQ9Y5P6 360 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 BRCA1P38398 1863 aaKnown RBP2.33□□□□□ -2.04
VPS41-206ENST00000418457 NYNRINQ9P2P1 1898 aaKnown RBP2.33□□□□□ -2.04
VPS41-206ENST00000418457 GREB1Q4ZG55 1949 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 SYNJ2BP-COX16A0A087WUM0 186 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 A0A096LPI6 279 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 TRAV24A0A0B4J272 114 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 LOC285095A0A1B0GVY8 99 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 A0A1W2PRQ8 180 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 MEIOCA2RUB1 952 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 EFCAB10A6NFE3 127 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 CASTOR2A6NHX0 329 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 ANXA2P2A6NMY6 339 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 YJEFN3A6XGL0 299 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 E9PQ18 207 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 DFFAO00273 331 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 B4GAT1O43505 415 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 SEC22BO75396 215 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 CDK2AP2O75956 126 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 SNAPC5O75971 98 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 RHOBTB1O94844 696 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 KCNK2O95069 426 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 MFN2O95140 757 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 CRYZL1O95825 349 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 FADS2O95864 444 aaKnown RBP2.32□□□□□ -2.04
VPS41-206ENST00000418457 OTCP00480 354 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 IGLV3-25P01717 112 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 FTH1P02794 183 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 MT-ND2P03891 347 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 LGALS2P05162 132 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 FABP3P05413 133 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 HLA-DQB2P05538 268 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 QDPRP09417 244 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 IQCF3P0C7M6 154 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 LINC00032P0C843 101 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 PRPS2P11908 318 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 IL7P13232 177 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 NCK1P16333 377 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 CEBPBP17676 345 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 LHCGRP22888 699 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 PPIBP23284 216 aaKnown RBP2.32□□□□□ -2.04
VPS41-206ENST00000418457 CXCR2P25025 360 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 PSMA3P25788 255 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 PTBP1P26599 531 aaKnown RBP eCLIP2.32□□□□□ -2.04
VPS41-206ENST00000418457 HLA-DMAP28067 261 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 HLA-FP30511 346 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 CCR1P32246 355 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 TGFBR2P37173 567 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 GNPDA1P46926 289 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 TTPAP49638 278 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 CLCN4P51793 760 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 PLK1P53350 603 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 AP2S1P53680 142 aaPredicted RBP2.32□□□□□ -2.04
VPS41-206ENST00000418457 IST1P53990 364 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 HMGCS2P54868 508 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 DIO3P55073 304 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 CDKN2DP55273 166 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 FOXA1P55317 472 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 MTPNP58546 118 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 VBP1P61758 197 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 NCS1P62166 190 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 DLK1P80370 383 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 TSPY1Q01534 308 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 IFITM3Q01628 133 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 SCN1BQ07699 218 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 IL10RBQ08334 325 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 LRRC74AQ0VAA2 488 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 GPR50Q13585 617 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 RAPSNQ13702 412 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 ZNF273Q14593 569 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 MAD2L1BPQ15013 274 aaPredicted RBP2.32□□□□□ -2.04
VPS41-206ENST00000418457 PON2Q15165 354 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 ANGPT1Q15389 498 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 TAB1Q15750 504 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 RBBP7Q16576 425 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 PARP15Q460N3 678 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 FUT11Q495W5 492 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 PYCR3Q53H96 274 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 XKR6Q5GH73 641 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 CDKL4Q5MAI5 379 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.32□□□□□ -2.04
VPS41-206ENST00000418457 ATAD3CQ5T2N8 411 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 ADAMTSL4-AS1Q5T5F5 129 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 MARC1Q5VT66 337 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 SYPL2Q5VXT5 272 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 TMEM236Q5W0B7 351 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 LRRC66Q68CR7 880 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 OR2T5Q6IEZ7 315 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 LAIR2Q6ISS4 152 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 PWWP2BQ6NUJ5 590 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 BHLHB9Q6PI77 547 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 AFTPHQ6ULP2 937 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 ENPP7Q6UWV6 458 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 TMEM207Q6UWW9 146 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 PIWIL3Q7Z3Z3 882 aaKnown RBP2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms