RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 LINC00114Q6XXX2 140 aa20.58■□□□□ 0.89
SMARCB1-205ENST00000417137 LUZP2Q86TE4 346 aa20.58■□□□□ 0.89
SMARCB1-205ENST00000417137 STK32CQ86UX6 486 aa20.58■□□□□ 0.89
SMARCB1-205ENST00000417137 KIF18BQ86Y91 864 aa20.58■□□□□ 0.89
SMARCB1-205ENST00000417137 OR6S1Q8NH40 331 aa20.58■□□□□ 0.89
SMARCB1-205ENST00000417137 SLC25A36Q96CQ1 311 aa20.58■□□□□ 0.89
SMARCB1-205ENST00000417137 KTI12Q96EK9 354 aaPredicted RBP20.58■□□□□ 0.89
SMARCB1-205ENST00000417137 HSH2DQ96JZ2 352 aa20.58■□□□□ 0.89
SMARCB1-205ENST00000417137 NSMCE2Q96MF7 247 aa20.58■□□□□ 0.89
SMARCB1-205ENST00000417137 PSD2Q9BQI7 771 aa20.58■□□□□ 0.89
SMARCB1-205ENST00000417137 RBM24Q9BX46 236 aaKnown RBP20.58■□□□□ 0.89
SMARCB1-205ENST00000417137 DOCK7Q96N67 2140 aa20.57■□□□□ 0.88
SMARCB1-205ENST00000417137 CGAP01215 116 aa20.57■□□□□ 0.88
SMARCB1-205ENST00000417137 MSX2P35548 267 aaPredicted RBP20.57■□□□□ 0.88
SMARCB1-205ENST00000417137 OTUD3Q5T2D3 398 aaPredicted RBP20.57■□□□□ 0.88
SMARCB1-205ENST00000417137 ABLIM2Q6H8Q1 611 aa20.57■□□□□ 0.88
SMARCB1-205ENST00000417137 GDF7Q7Z4P5 450 aa20.57■□□□□ 0.88
SMARCB1-205ENST00000417137 SPOCK3Q9BQ16 436 aa20.57■□□□□ 0.88
SMARCB1-205ENST00000417137 MUC13Q9H3R2 512 aa20.57■□□□□ 0.88
SMARCB1-205ENST00000417137 SLC24A3Q9HC58 644 aa20.57■□□□□ 0.88
SMARCB1-205ENST00000417137 FANCFQ9NPI8 374 aa20.57■□□□□ 0.88
SMARCB1-205ENST00000417137 RIMS3Q9UJD0 308 aa20.57■□□□□ 0.88
SMARCB1-205ENST00000417137 SPTBN1Q01082 2364 aaKnown RBP20.56■□□□□ 0.88
SMARCB1-205ENST00000417137 IGKV1D-42A0A075B6H8 117 aa20.56■□□□□ 0.88
SMARCB1-205ENST00000417137 IGKV3D-15A0A087WSY6 115 aa20.56■□□□□ 0.88
SMARCB1-205ENST00000417137 C19orf84I3L1E1 186 aa20.56■□□□□ 0.88
SMARCB1-205ENST00000417137 ARPC2O15144 300 aa20.56■□□□□ 0.88
SMARCB1-205ENST00000417137 GYG2O15488 501 aa20.56■□□□□ 0.88
SMARCB1-205ENST00000417137 AKR7A3O95154 331 aa20.56■□□□□ 0.88
SMARCB1-205ENST00000417137 VAMP5O95183 116 aa20.56■□□□□ 0.88
SMARCB1-205ENST00000417137 COX6B1P14854 86 aa20.56■□□□□ 0.88
SMARCB1-205ENST00000417137 COL8A1P27658 744 aa20.56■□□□□ 0.88
SMARCB1-205ENST00000417137 ST3GAL3Q11203 375 aa20.56■□□□□ 0.88
SMARCB1-205ENST00000417137 PIN1Q13526 163 aaPredicted RBP20.56■□□□□ 0.88
SMARCB1-205ENST00000417137 DNAL1Q4LDG9 190 aa20.56■□□□□ 0.88
SMARCB1-205ENST00000417137 TMEM225Q6GV28 225 aa20.56■□□□□ 0.88
SMARCB1-205ENST00000417137 CYP4Z1Q86W10 505 aa20.56■□□□□ 0.88
SMARCB1-205ENST00000417137 CCDC103Q8IW40 242 aa20.56■□□□□ 0.88
SMARCB1-205ENST00000417137 TAAR8Q969N4 342 aa20.56■□□□□ 0.88
SMARCB1-205ENST00000417137 PTDSS2Q9BVG9 487 aa20.56■□□□□ 0.88
SMARCB1-205ENST00000417137 SF3B5Q9BWJ5 86 aaKnown RBP20.56■□□□□ 0.88
SMARCB1-205ENST00000417137 SLC19A3Q9BZV2 496 aa20.56■□□□□ 0.88
SMARCB1-205ENST00000417137 AMBRA1Q9C0C7 1298 aa20.56■□□□□ 0.88
SMARCB1-205ENST00000417137 ENKD1Q9H0I2 346 aa20.56■□□□□ 0.88
SMARCB1-205ENST00000417137 NPDC1Q9NQX5 325 aaPredicted RBP20.56■□□□□ 0.88
SMARCB1-205ENST00000417137 ELOVL5Q9NYP7 299 aa20.56■□□□□ 0.88
SMARCB1-205ENST00000417137 C6orf203Q9P0P8 240 aaPredicted RBP20.56■□□□□ 0.88
SMARCB1-205ENST00000417137 AQP7P3A6NL99 342 aa20.55■□□□□ 0.88
SMARCB1-205ENST00000417137 ATP5HO75947 161 aa20.55■□□□□ 0.88
SMARCB1-205ENST00000417137 KLK2P20151 261 aa20.55■□□□□ 0.88
SMARCB1-205ENST00000417137 RASSF2P50749 326 aa20.55■□□□□ 0.88
SMARCB1-205ENST00000417137 SLC16A1P53985 500 aa20.55■□□□□ 0.88
SMARCB1-205ENST00000417137 GALNT5Q7Z7M9 940 aa20.55■□□□□ 0.88
SMARCB1-205ENST00000417137 P3H2Q8IVL5 708 aa20.55■□□□□ 0.88
SMARCB1-205ENST00000417137 C10orf53Q8N6V4 93 aa20.55■□□□□ 0.88
SMARCB1-205ENST00000417137 TMEM99Q8N816 258 aa20.55■□□□□ 0.88
SMARCB1-205ENST00000417137 ZNF610Q8N9Z0 462 aa20.55■□□□□ 0.88
SMARCB1-205ENST00000417137 PRRC1Q96M27 445 aa20.55■□□□□ 0.88
SMARCB1-205ENST00000417137 HS6ST2Q96MM7 605 aa20.55■□□□□ 0.88
SMARCB1-205ENST00000417137 FNDC11Q9BVV2 318 aa20.55■□□□□ 0.88
SMARCB1-205ENST00000417137 OPN3Q9H1Y3 402 aaPredicted RBP20.55■□□□□ 0.88
SMARCB1-205ENST00000417137 ACTR3BQ9P1U1 418 aa20.55■□□□□ 0.88
SMARCB1-205ENST00000417137 ING1Q9UK53 422 aaPredicted RBP20.55■□□□□ 0.88
SMARCB1-205ENST00000417137 RASD1Q9Y272 281 aa20.55■□□□□ 0.88
SMARCB1-205ENST00000417137 FAM32AQ9Y421 112 aaKnown RBP20.55■□□□□ 0.88
SMARCB1-205ENST00000417137 ICE1Q9Y2F5 2266 aa20.55■□□□□ 0.88
SMARCB1-205ENST00000417137 FTCDNL1E5RQL4 147 aa20.54■□□□□ 0.88
SMARCB1-205ENST00000417137 LYPD3O95274 346 aa20.54■□□□□ 0.88
SMARCB1-205ENST00000417137 STAMBPO95630 424 aa20.54■□□□□ 0.88
SMARCB1-205ENST00000417137 THY1P04216 161 aa20.54■□□□□ 0.88
SMARCB1-205ENST00000417137 RBM34P42696 430 aaKnown RBP20.54■□□□□ 0.88
SMARCB1-205ENST00000417137 PCYT1AP49585 367 aa20.54■□□□□ 0.88
SMARCB1-205ENST00000417137 BNIP1Q12981 228 aa20.54■□□□□ 0.88
SMARCB1-205ENST00000417137 MEX3BQ6ZN04 569 aaKnown RBP20.54■□□□□ 0.88
SMARCB1-205ENST00000417137 BEND4Q6ZU67 534 aa20.54■□□□□ 0.88
SMARCB1-205ENST00000417137 TSPYL5Q86VY4 417 aaPredicted RBP20.54■□□□□ 0.88
SMARCB1-205ENST00000417137 PYURFQ96I23 114 aa20.54■□□□□ 0.88
SMARCB1-205ENST00000417137 ZNF300Q96RE9 604 aaPredicted RBP20.54■□□□□ 0.88
SMARCB1-205ENST00000417137 BTBD10Q9BSF8 475 aa20.54■□□□□ 0.88
SMARCB1-205ENST00000417137 THTPAQ9BU02 230 aa20.54■□□□□ 0.88
SMARCB1-205ENST00000417137 C12orf49Q9H741 205 aa20.54■□□□□ 0.88
SMARCB1-205ENST00000417137 CORINQ9Y5Q5 1042 aa20.54■□□□□ 0.88
SMARCB1-205ENST00000417137 MED12LQ86YW9 2145 aa20.54■□□□□ 0.88
SMARCB1-205ENST00000417137 ZNF716A6NP11 495 aa20.53■□□□□ 0.88
SMARCB1-205ENST00000417137 ZNF814B7Z6K7 855 aa20.53■□□□□ 0.88
SMARCB1-205ENST00000417137 MT-ATP6P00846 226 aa20.53■□□□□ 0.88
SMARCB1-205ENST00000417137 TRIM25Q14258 630 aaKnown RBP20.53■□□□□ 0.88
SMARCB1-205ENST00000417137 SLC17A1Q14916 467 aa20.53■□□□□ 0.88
SMARCB1-205ENST00000417137 MTX3Q5HYI7 312 aa20.53■□□□□ 0.88
SMARCB1-205ENST00000417137 NUFIP2Q7Z417 695 aaKnown RBP20.53■□□□□ 0.88
SMARCB1-205ENST00000417137 POP5Q969H6 163 aaKnown RBP20.53■□□□□ 0.88
SMARCB1-205ENST00000417137 MCUR1Q96AQ8 359 aa20.53■□□□□ 0.88
SMARCB1-205ENST00000417137 ZNF775Q96BV0 537 aaPredicted RBP20.53■□□□□ 0.88
SMARCB1-205ENST00000417137 ASPNQ9BXN1 380 aa20.53■□□□□ 0.88
SMARCB1-205ENST00000417137 KLHL4Q9C0H6 718 aa20.53■□□□□ 0.88
SMARCB1-205ENST00000417137 PARPBPQ9NWS1 579 aa20.53■□□□□ 0.88
SMARCB1-205ENST00000417137 GALNT8Q9NY28 637 aa20.53■□□□□ 0.88
SMARCB1-205ENST00000417137 A4GNTQ9UNA3 340 aa20.53■□□□□ 0.88
SMARCB1-205ENST00000417137 B3GALT5Q9Y2C3 310 aa20.53■□□□□ 0.88
SMARCB1-205ENST00000417137 NOSIPQ9Y314 301 aaKnown RBP20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms