RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 DEPDC4Q8N2C3 294 aa15.46■□□□□ 0.07
PDLIM2-208ENST00000416159 PIAS4Q8N2W9 510 aaPredicted RBP15.46■□□□□ 0.07
PDLIM2-208ENST00000416159 C17orf78Q8N4C9 275 aa15.46■□□□□ 0.07
PDLIM2-208ENST00000416159 C1orf162Q8NEQ5 155 aaPredicted RBP15.46■□□□□ 0.07
PDLIM2-208ENST00000416159 OR9K2Q8NGE7 335 aa15.46■□□□□ 0.07
PDLIM2-208ENST00000416159 SLC35B4Q969S0 331 aa15.46■□□□□ 0.07
PDLIM2-208ENST00000416159 TCF7L2Q9NQB0 619 aa15.46■□□□□ 0.07
PDLIM2-208ENST00000416159 SLC7A10Q9NS82 523 aa15.46■□□□□ 0.07
PDLIM2-208ENST00000416159 CHST2Q9Y4C5 530 aa15.46■□□□□ 0.07
PDLIM2-208ENST00000416159 PLCE1Q9P212 2302 aa15.46■□□□□ 0.07
PDLIM2-208ENST00000416159 ABCA2Q9BZC7 2435 aa15.45■□□□□ 0.06
PDLIM2-208ENST00000416159 TLN2Q9Y4G6 2542 aa15.45■□□□□ 0.06
PDLIM2-208ENST00000416159 A0A1W2PR80 420 aa15.45■□□□□ 0.06
PDLIM2-208ENST00000416159 VAMP5O95183 116 aa15.45■□□□□ 0.06
PDLIM2-208ENST00000416159 BMP2P12643 396 aa15.45■□□□□ 0.06
PDLIM2-208ENST00000416159 CD40P25942 277 aa15.45■□□□□ 0.06
PDLIM2-208ENST00000416159 BNIP2Q12982 314 aa15.45■□□□□ 0.06
PDLIM2-208ENST00000416159 C1orf140Q5VVS0 124 aa15.45■□□□□ 0.06
PDLIM2-208ENST00000416159 SLC2A7Q6PXP3 512 aa15.45■□□□□ 0.06
PDLIM2-208ENST00000416159 SLC22A25Q6T423 547 aa15.45■□□□□ 0.06
PDLIM2-208ENST00000416159 AAED1Q7RTV5 226 aa15.45■□□□□ 0.06
PDLIM2-208ENST00000416159 GOLGA6L1Q8N7Z2 621 aa15.45■□□□□ 0.06
PDLIM2-208ENST00000416159 WDR31Q8NA23 367 aa15.45■□□□□ 0.06
PDLIM2-208ENST00000416159 POMGNT2Q8NAT1 580 aa15.45■□□□□ 0.06
PDLIM2-208ENST00000416159 BBS10Q8TAM1 723 aa15.45■□□□□ 0.06
PDLIM2-208ENST00000416159 STK35Q8TDR2 534 aa15.45■□□□□ 0.06
PDLIM2-208ENST00000416159 LRRC8CQ8TDW0 803 aa15.45■□□□□ 0.06
PDLIM2-208ENST00000416159 CCDC28BQ9BUN5 200 aa15.45■□□□□ 0.06
PDLIM2-208ENST00000416159 SLCO5A1Q9H2Y9 848 aa15.45■□□□□ 0.06
PDLIM2-208ENST00000416159 BARX1Q9HBU1 254 aaPredicted RBP15.45■□□□□ 0.06
PDLIM2-208ENST00000416159 A4GALTQ9NPC4 353 aa15.45■□□□□ 0.06
PDLIM2-208ENST00000416159 SLC17A5Q9NRA2 495 aa15.45■□□□□ 0.06
PDLIM2-208ENST00000416159 POU2F3Q9UKI9 436 aa15.45■□□□□ 0.06
PDLIM2-208ENST00000416159 AMDHD2Q9Y303 409 aa15.45■□□□□ 0.06
PDLIM2-208ENST00000416159 ALPK2Q86TB3 2170 aa15.45■□□□□ 0.06
PDLIM2-208ENST00000416159 C5orf58C9J3I9 102 aa15.44■□□□□ 0.06
PDLIM2-208ENST00000416159 M0R1B8 84 aa15.44■□□□□ 0.06
PDLIM2-208ENST00000416159 NUDT7P0C024 238 aa15.44■□□□□ 0.06
PDLIM2-208ENST00000416159 PRG2P13727 222 aa15.44■□□□□ 0.06
PDLIM2-208ENST00000416159 MPGP29372 298 aa15.44■□□□□ 0.06
PDLIM2-208ENST00000416159 IDH3AP50213 366 aa15.44■□□□□ 0.06
PDLIM2-208ENST00000416159 PPP2R2BQ00005 443 aa15.44■□□□□ 0.06
PDLIM2-208ENST00000416159 C9orf135Q5VTT2 229 aa15.44■□□□□ 0.06
PDLIM2-208ENST00000416159 ABHD12BQ7Z5M8 362 aaPredicted RBP15.44■□□□□ 0.06
PDLIM2-208ENST00000416159 SERPINA11Q86U17 422 aa15.44■□□□□ 0.06
PDLIM2-208ENST00000416159 ZIC4Q8N9L1 334 aa15.44■□□□□ 0.06
PDLIM2-208ENST00000416159 C3orf49Q96BT1 292 aa15.44■□□□□ 0.06
PDLIM2-208ENST00000416159 HS6ST2Q96MM7 605 aa15.44■□□□□ 0.06
PDLIM2-208ENST00000416159 ZNF385AQ96PM9 386 aaKnown RBP15.44■□□□□ 0.06
PDLIM2-208ENST00000416159 DHRS9Q9BPW9 319 aa15.44■□□□□ 0.06
PDLIM2-208ENST00000416159 REG4Q9BYZ8 158 aa15.44■□□□□ 0.06
PDLIM2-208ENST00000416159 ADPRHL2Q9NX46 363 aa15.44■□□□□ 0.06
PDLIM2-208ENST00000416159 NSD1Q96L73 2696 aaPredicted RBP15.44■□□□□ 0.06
PDLIM2-208ENST00000416159 TMEM229AB2RXF0 380 aa15.43■□□□□ 0.06
PDLIM2-208ENST00000416159 E7EQL1 145 aa15.43■□□□□ 0.06
PDLIM2-208ENST00000416159 FRS3O43559 492 aa15.43■□□□□ 0.06
PDLIM2-208ENST00000416159 NPIPB7O75200 414 aa15.43■□□□□ 0.06
PDLIM2-208ENST00000416159 AHSA1O95433 338 aa15.43■□□□□ 0.06
PDLIM2-208ENST00000416159 IGHV4-39P01824 125 aa15.43■□□□□ 0.06
PDLIM2-208ENST00000416159 ETS2P15036 469 aa15.43■□□□□ 0.06
PDLIM2-208ENST00000416159 HOXB9P17482 250 aaPredicted RBP15.43■□□□□ 0.06
PDLIM2-208ENST00000416159 PPIBP23284 216 aaKnown RBP15.43■□□□□ 0.06
PDLIM2-208ENST00000416159 PCSK6P29122 969 aa15.43■□□□□ 0.06
PDLIM2-208ENST00000416159 TTKP33981 857 aa15.43■□□□□ 0.06
PDLIM2-208ENST00000416159 ACVR1BP36896 505 aa15.43■□□□□ 0.06
PDLIM2-208ENST00000416159 PRPS1P60891 318 aa15.43■□□□□ 0.06
PDLIM2-208ENST00000416159 NRF1Q16656 503 aa15.43■□□□□ 0.06
PDLIM2-208ENST00000416159 LRIF1Q5T3J3 769 aa15.43■□□□□ 0.06
PDLIM2-208ENST00000416159 BLOC1S3Q6QNY0 202 aa15.43■□□□□ 0.06
PDLIM2-208ENST00000416159 GPAT4Q86UL3 456 aa15.43■□□□□ 0.06
PDLIM2-208ENST00000416159 LSRQ86X29 649 aaPredicted RBP15.43■□□□□ 0.06
PDLIM2-208ENST00000416159 FUNDC1Q8IVP5 155 aa15.43■□□□□ 0.06
PDLIM2-208ENST00000416159 FBXL14Q8N1E6 418 aa15.43■□□□□ 0.06
PDLIM2-208ENST00000416159 MFSD8Q8NHS3 518 aa15.43■□□□□ 0.06
PDLIM2-208ENST00000416159 MAL2Q969L2 176 aa15.43■□□□□ 0.06
PDLIM2-208ENST00000416159 SPDL1Q96EA4 605 aa15.43■□□□□ 0.06
PDLIM2-208ENST00000416159 C1QTNF6Q9BXI9 259 aa15.43■□□□□ 0.06
PDLIM2-208ENST00000416159 SLCO1B3Q9NPD5 702 aa15.43■□□□□ 0.06
PDLIM2-208ENST00000416159 CBLN4Q9NTU7 201 aa15.43■□□□□ 0.06
PDLIM2-208ENST00000416159 TMEM45AQ9NWC5 275 aa15.43■□□□□ 0.06
PDLIM2-208ENST00000416159 RASD1Q9Y272 281 aa15.43■□□□□ 0.06
PDLIM2-208ENST00000416159 B3GALT5Q9Y2C3 310 aa15.43■□□□□ 0.06
PDLIM2-208ENST00000416159 RNF223E7ERA6 249 aa15.42■□□□□ 0.06
PDLIM2-208ENST00000416159 WNT11O96014 354 aa15.42■□□□□ 0.06
PDLIM2-208ENST00000416159 FABP6P51161 128 aa15.42■□□□□ 0.06
PDLIM2-208ENST00000416159 P2RY4P51582 365 aa15.42■□□□□ 0.06
PDLIM2-208ENST00000416159 IRX1P78414 480 aaPredicted RBP15.42■□□□□ 0.06
PDLIM2-208ENST00000416159 KLHL24Q6TFL4 600 aa15.42■□□□□ 0.06
PDLIM2-208ENST00000416159 BOD1Q96IK1 185 aa15.42■□□□□ 0.06
PDLIM2-208ENST00000416159 ATP6V1G3Q96LB4 118 aa15.42■□□□□ 0.06
PDLIM2-208ENST00000416159 ADAD1Q96M93 576 aaKnown RBP15.42■□□□□ 0.06
PDLIM2-208ENST00000416159 EBF4Q9BQW3 602 aa15.42■□□□□ 0.06
PDLIM2-208ENST00000416159 FKRPQ9H9S5 495 aa15.42■□□□□ 0.06
PDLIM2-208ENST00000416159 SLC25A37Q9NYZ2 338 aa15.42■□□□□ 0.06
PDLIM2-208ENST00000416159 RPS6KB2Q9UBS0 482 aa15.42■□□□□ 0.06
PDLIM2-208ENST00000416159 GMEB1Q9Y692 573 aa15.42■□□□□ 0.06
PDLIM2-208ENST00000416159 OR6C65A6NJZ3 312 aa15.41■□□□□ 0.06
PDLIM2-208ENST00000416159 INAFM1C9JVW0 142 aa15.41■□□□□ 0.06
PDLIM2-208ENST00000416159 NR5A2O00482 541 aa15.41■□□□□ 0.06
PDLIM2-208ENST00000416159 NDUFS7O75251 213 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms