RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 EPOPA6NHQ4 379 aa9.03□□□□□ -0.96
SS18-203ENST00000415083 C17orf51A8MQB3 221 aa9.03□□□□□ -0.96
SS18-203ENST00000415083 GALR3O60755 368 aaPredicted RBP9.03□□□□□ -0.96
SS18-203ENST00000415083 TOXO94900 526 aa9.03□□□□□ -0.96
SS18-203ENST00000415083 SLC35G6P0C7Q6 338 aa9.03□□□□□ -0.96
SS18-203ENST00000415083 PRKACBP22694 351 aa9.03□□□□□ -0.96
SS18-203ENST00000415083 CCR9P51686 369 aa9.03□□□□□ -0.96
SS18-203ENST00000415083 RGS1Q08116 209 aa9.03□□□□□ -0.96
SS18-203ENST00000415083 EXOSC2Q13868 293 aaKnown RBP9.03□□□□□ -0.96
SS18-203ENST00000415083 C2orf68Q2NKX9 166 aa9.03□□□□□ -0.96
SS18-203ENST00000415083 SFRP4Q6FHJ7 346 aaPredicted RBP9.03□□□□□ -0.96
SS18-203ENST00000415083 GRAMD2AQ8IUY3 354 aa9.03□□□□□ -0.96
SS18-203ENST00000415083 OR10G6Q8NH81 332 aa9.03□□□□□ -0.96
SS18-203ENST00000415083 OR14A16Q8NHC5 309 aa9.03□□□□□ -0.96
SS18-203ENST00000415083 MOSPD2Q8NHP6 518 aa9.03□□□□□ -0.96
SS18-203ENST00000415083 OR2M2Q96R28 347 aa9.03□□□□□ -0.96
SS18-203ENST00000415083 MFRPQ9BY79 579 aa9.03□□□□□ -0.96
SS18-203ENST00000415083 C20orf85Q9H1P6 137 aa9.03□□□□□ -0.96
SS18-203ENST00000415083 HRASLSQ9HDD0 168 aa9.03□□□□□ -0.96
SS18-203ENST00000415083 CAMK2AQ9UQM7 478 aa9.03□□□□□ -0.96
SS18-203ENST00000415083 PCDHGA5Q9Y5G8 931 aa9.03□□□□□ -0.96
SS18-203ENST00000415083 SLCO1B1Q9Y6L6 691 aa9.03□□□□□ -0.96
SS18-203ENST00000415083 F5P12259 2224 aa9.03□□□□□ -0.96
SS18-203ENST00000415083 TBC1D3DA0A087WVF3 549 aa9.03□□□□□ -0.96
SS18-203ENST00000415083 TBC1D3IA0A087WXS9 549 aa9.03□□□□□ -0.96
SS18-203ENST00000415083 FAM86C2PA6NEL3 165 aa9.03□□□□□ -0.96
SS18-203ENST00000415083 TBC1D3LB9A6J9 549 aa9.03□□□□□ -0.96
SS18-203ENST00000415083 I3L521 148 aa9.03□□□□□ -0.96
SS18-203ENST00000415083 CTDSPLO15194 276 aa9.03□□□□□ -0.96
SS18-203ENST00000415083 ZFPL1O95159 310 aa9.03□□□□□ -0.96
SS18-203ENST00000415083 TBC1D3HP0C7X1 549 aa9.03□□□□□ -0.96
SS18-203ENST00000415083 CDKN2AP42771 156 aaKnown RBP9.03□□□□□ -0.96
SS18-203ENST00000415083 PUDPQ08623 228 aa9.03□□□□□ -0.96
SS18-203ENST00000415083 ZNF776Q68DI1 518 aaPredicted RBP9.03□□□□□ -0.96
SS18-203ENST00000415083 TBC1D3CQ6IPX1 549 aa9.03□□□□□ -0.96
SS18-203ENST00000415083 SLC35F2Q8IXU6 374 aa9.03□□□□□ -0.96
SS18-203ENST00000415083 TBC1D3Q8IZP1 549 aaPredicted RBP9.03□□□□□ -0.96
SS18-203ENST00000415083 SLC2A12Q8TD20 617 aa9.03□□□□□ -0.96
SS18-203ENST00000415083 SPACA7Q96KW9 195 aa9.03□□□□□ -0.96
SS18-203ENST00000415083 C1QTNF6Q9BXI9 259 aa9.03□□□□□ -0.96
SS18-203ENST00000415083 OBP2AQ9NY56 170 aa9.03□□□□□ -0.96
SS18-203ENST00000415083 LRIT1Q9P2V4 623 aa9.03□□□□□ -0.96
SS18-203ENST00000415083 SCML1Q9UN30 329 aa9.03□□□□□ -0.96
SS18-203ENST00000415083 COLEC10Q9Y6Z7 277 aa9.03□□□□□ -0.96
SS18-203ENST00000415083 RIIAD1A6NNX1 92 aa9.02□□□□□ -0.96
SS18-203ENST00000415083 CA3P07451 260 aa9.02□□□□□ -0.96
SS18-203ENST00000415083 RPS4XP62701 263 aaKnown RBP9.02□□□□□ -0.96
SS18-203ENST00000415083 POU6F2P78424 691 aaPredicted RBP9.02□□□□□ -0.96
SS18-203ENST00000415083 LTBQ06643 244 aa9.02□□□□□ -0.96
SS18-203ENST00000415083 FGFBP1Q14512 234 aa9.02□□□□□ -0.96
SS18-203ENST00000415083 ARHGEF6Q15052 776 aa9.02□□□□□ -0.96
SS18-203ENST00000415083 ALG11Q2TAA5 492 aa9.02□□□□□ -0.96
SS18-203ENST00000415083 RNF44Q7L0R7 432 aa9.02□□□□□ -0.96
SS18-203ENST00000415083 SLC22A18ASQ8N1D0 253 aa9.02□□□□□ -0.96
SS18-203ENST00000415083 OR4C3Q8NH37 302 aa9.02□□□□□ -0.96
SS18-203ENST00000415083 OR4C6Q8NH72 309 aa9.02□□□□□ -0.96
SS18-203ENST00000415083 BAHD1Q8TBE0 780 aaPredicted RBP9.02□□□□□ -0.96
SS18-203ENST00000415083 VSTM2LQ96N03 204 aa9.02□□□□□ -0.96
SS18-203ENST00000415083 DPCDQ9BVM2 203 aaPredicted RBP9.02□□□□□ -0.96
SS18-203ENST00000415083 PLEKHA1Q9HB21 404 aa9.02□□□□□ -0.96
SS18-203ENST00000415083 OR5V1Q9UGF6 321 aa9.02□□□□□ -0.96
SS18-203ENST00000415083 THADAQ6YHU6 1953 aa9.02□□□□□ -0.97
SS18-203ENST00000415083 CACNA1IQ9P0X4 2223 aa9.02□□□□□ -0.97
SS18-203ENST00000415083 C10orf142B7Z368 130 aa9.02□□□□□ -0.97
SS18-203ENST00000415083 KCNJ13O60928 360 aa9.02□□□□□ -0.97
SS18-203ENST00000415083 H2AFB2P0C5Z0 115 aa9.02□□□□□ -0.97
SS18-203ENST00000415083 ZNF3P17036 446 aa9.02□□□□□ -0.97
SS18-203ENST00000415083 SPI1P17947 270 aa9.02□□□□□ -0.97
SS18-203ENST00000415083 SRMP19623 302 aa9.02□□□□□ -0.97
SS18-203ENST00000415083 CXCL2P19875 107 aa9.02□□□□□ -0.97
SS18-203ENST00000415083 POU3F2P20265 443 aaPredicted RBP9.02□□□□□ -0.97
SS18-203ENST00000415083 RAD52P43351 418 aa9.02□□□□□ -0.97
SS18-203ENST00000415083 VEGFCP49767 419 aa9.02□□□□□ -0.97
SS18-203ENST00000415083 ZNF267Q14586 743 aaPredicted RBP9.02□□□□□ -0.97
SS18-203ENST00000415083 KIR2DS3Q14952 304 aa9.02□□□□□ -0.97
SS18-203ENST00000415083 TRAM1Q15629 374 aa9.02□□□□□ -0.97
SS18-203ENST00000415083 NNATQ16517 81 aa9.02□□□□□ -0.97
SS18-203ENST00000415083 DEFB110Q30KQ9 67 aa9.02□□□□□ -0.97
SS18-203ENST00000415083 ALG10BQ5I7T1 473 aa9.02□□□□□ -0.97
SS18-203ENST00000415083 OTPQ5XKR4 325 aa9.02□□□□□ -0.97
SS18-203ENST00000415083 ASPHD2Q6ICH7 369 aa9.02□□□□□ -0.97
SS18-203ENST00000415083 RTL4Q6ZR62 310 aa9.02□□□□□ -0.97
SS18-203ENST00000415083 LRRC75AQ8NAA5 344 aa9.02□□□□□ -0.97
SS18-203ENST00000415083 RCBTB1Q8NDN9 531 aa9.02□□□□□ -0.97
SS18-203ENST00000415083 OR10AC1Q8NH08 325 aa9.02□□□□□ -0.97
SS18-203ENST00000415083 HERVK_113Q902F9 699 aa9.02□□□□□ -0.97
SS18-203ENST00000415083 SEC22CQ9BRL7 303 aa9.02□□□□□ -0.97
SS18-203ENST00000415083 LMF2Q9BU23 707 aaKnown RBP9.02□□□□□ -0.97
SS18-203ENST00000415083 TEX12Q9BXU0 123 aa9.02□□□□□ -0.97
SS18-203ENST00000415083 NRIP3Q9NQ35 241 aa9.02□□□□□ -0.97
SS18-203ENST00000415083 NANSQ9NR45 359 aa9.02□□□□□ -0.97
SS18-203ENST00000415083 GNG8Q9UK08 70 aa9.02□□□□□ -0.97
SS18-203ENST00000415083 RCE1Q9Y256 329 aa9.02□□□□□ -0.97
SS18-203ENST00000415083 FRYLO94915 3013 aa9.02□□□□□ -0.97
SS18-203ENST00000415083 H0YC42 278 aa9.02□□□□□ -0.97
SS18-203ENST00000415083 RDH16O75452 317 aa9.02□□□□□ -0.97
SS18-203ENST00000415083 UPK3AO75631 287 aa9.02□□□□□ -0.97
SS18-203ENST00000415083 ABHD16AO95870 558 aa9.02□□□□□ -0.97
SS18-203ENST00000415083 HRGP04196 525 aa9.02□□□□□ -0.97
SS18-203ENST00000415083 CT45A8P0DMV1 189 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms