RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 ADPRHL1Q8NDY3 354 aa13.05□□□□□ -0.32
LIMS1-206ENST00000414829 SLC41A3Q96GZ6 507 aa13.05□□□□□ -0.32
LIMS1-206ENST00000414829 NSMCE2Q96MF7 247 aa13.05□□□□□ -0.32
LIMS1-206ENST00000414829 HS6ST2Q96MM7 605 aa13.05□□□□□ -0.32
LIMS1-206ENST00000414829 USB1Q9BQ65 265 aaKnown RBP13.05□□□□□ -0.32
LIMS1-206ENST00000414829 ASPNQ9BXN1 380 aa13.05□□□□□ -0.32
LIMS1-206ENST00000414829 NPDC1Q9NQX5 325 aaPredicted RBP13.05□□□□□ -0.32
LIMS1-206ENST00000414829 PLSCR4Q9NRQ2 329 aa13.05□□□□□ -0.32
LIMS1-206ENST00000414829 PARPBPQ9NWS1 579 aa13.05□□□□□ -0.32
LIMS1-206ENST00000414829 SLC7A7Q9UM01 511 aa13.05□□□□□ -0.32
LIMS1-206ENST00000414829 B3GALT5Q9Y2C3 310 aa13.05□□□□□ -0.32
LIMS1-206ENST00000414829 MED12Q93074 2177 aa13.05□□□□□ -0.32
LIMS1-206ENST00000414829 IGHV3-15A0A0B4J1V0 119 aa13.04□□□□□ -0.32
LIMS1-206ENST00000414829 AKAP8O43823 692 aaKnown RBP13.04□□□□□ -0.32
LIMS1-206ENST00000414829 IGF2P01344 180 aa13.04□□□□□ -0.32
LIMS1-206ENST00000414829 IMPDH2P12268 514 aa13.04□□□□□ -0.32
LIMS1-206ENST00000414829 ITGA2P17301 1181 aa13.04□□□□□ -0.32
LIMS1-206ENST00000414829 TCN1P20061 433 aaPredicted RBP13.04□□□□□ -0.32
LIMS1-206ENST00000414829 RPS5P46782 204 aaKnown RBP13.04□□□□□ -0.32
LIMS1-206ENST00000414829 DMRTC2Q8IXT2 367 aaPredicted RBP13.04□□□□□ -0.32
LIMS1-206ENST00000414829 SCAIQ8N9R8 606 aa13.04□□□□□ -0.32
LIMS1-206ENST00000414829 MCUR1Q96AQ8 359 aa13.04□□□□□ -0.32
LIMS1-206ENST00000414829 HSH2DQ96JZ2 352 aa13.04□□□□□ -0.32
LIMS1-206ENST00000414829 RSPO3Q9BXY4 272 aaPredicted RBP13.04□□□□□ -0.32
LIMS1-206ENST00000414829 TRIM15Q9C019 465 aa13.04□□□□□ -0.32
LIMS1-206ENST00000414829 DCAF13Q9NV06 445 aaKnown RBP13.04□□□□□ -0.32
LIMS1-206ENST00000414829 GALNT8Q9NY28 637 aa13.04□□□□□ -0.32
LIMS1-206ENST00000414829 KCNN3Q9UGI6 736 aa13.04□□□□□ -0.32
LIMS1-206ENST00000414829 CD300AQ9UGN4 299 aa13.04□□□□□ -0.32
LIMS1-206ENST00000414829 EGFL7Q9UHF1 273 aa13.04□□□□□ -0.32
LIMS1-206ENST00000414829 CLEC4AQ9UMR7 237 aa13.04□□□□□ -0.32
LIMS1-206ENST00000414829 NOSIPQ9Y314 301 aaKnown RBP13.04□□□□□ -0.32
LIMS1-206ENST00000414829 FAM32AQ9Y421 112 aaKnown RBP13.04□□□□□ -0.32
LIMS1-206ENST00000414829 FREM3P0C091 2139 aa13.03□□□□□ -0.32
LIMS1-206ENST00000414829 OR6C65A6NJZ3 312 aa13.03□□□□□ -0.32
LIMS1-206ENST00000414829 ARPC2O15144 300 aa13.03□□□□□ -0.32
LIMS1-206ENST00000414829 TPST2O60704 377 aa13.03□□□□□ -0.32
LIMS1-206ENST00000414829 ATP5HO75947 161 aa13.03□□□□□ -0.32
LIMS1-206ENST00000414829 CGAP01215 116 aa13.03□□□□□ -0.32
LIMS1-206ENST00000414829 POU2F1P14859 743 aa13.03□□□□□ -0.32
LIMS1-206ENST00000414829 PPP3CBP16298 524 aa13.03□□□□□ -0.32
LIMS1-206ENST00000414829 HOXB6P17509 224 aaKnown RBP13.03□□□□□ -0.32
LIMS1-206ENST00000414829 GRNP28799 593 aaKnown RBP13.03□□□□□ -0.32
LIMS1-206ENST00000414829 CD79BP40259 229 aa13.03□□□□□ -0.32
LIMS1-206ENST00000414829 EGR4Q05215 589 aa13.03□□□□□ -0.32
LIMS1-206ENST00000414829 POU4F3Q15319 338 aa13.03□□□□□ -0.32
LIMS1-206ENST00000414829 TMEM225Q6GV28 225 aa13.03□□□□□ -0.32
LIMS1-206ENST00000414829 SSX8Q7RTT4 187 aa13.03□□□□□ -0.32
LIMS1-206ENST00000414829 GDF7Q7Z4P5 450 aa13.03□□□□□ -0.32
LIMS1-206ENST00000414829 TUSC5Q8IXB3 177 aa13.03□□□□□ -0.32
LIMS1-206ENST00000414829 OFCC1Q8IZS5 231 aa13.03□□□□□ -0.32
LIMS1-206ENST00000414829 C10orf53Q8N6V4 93 aa13.03□□□□□ -0.32
LIMS1-206ENST00000414829 RNF148Q8N7C7 305 aa13.03□□□□□ -0.32
LIMS1-206ENST00000414829 OR4D11Q8NGI4 311 aa13.03□□□□□ -0.32
LIMS1-206ENST00000414829 KTI12Q96EK9 354 aaPredicted RBP13.03□□□□□ -0.32
LIMS1-206ENST00000414829 ZNF426Q9BUY5 554 aa13.03□□□□□ -0.32
LIMS1-206ENST00000414829 PTDSS2Q9BVG9 487 aa13.03□□□□□ -0.32
LIMS1-206ENST00000414829 OR10A4Q9H209 315 aa13.03□□□□□ -0.32
LIMS1-206ENST00000414829 ANKRD19PQ9H560 264 aa13.03□□□□□ -0.32
LIMS1-206ENST00000414829 ACTR3BQ9P1U1 418 aa13.03□□□□□ -0.32
LIMS1-206ENST00000414829 NDRG3Q9UGV2 375 aa13.03□□□□□ -0.32
LIMS1-206ENST00000414829 ASH1LQ9NR48 2969 aaKnown RBP13.02□□□□□ -0.32
LIMS1-206ENST00000414829 IGKV1D-42A0A075B6H8 117 aa13.02□□□□□ -0.33
LIMS1-206ENST00000414829 TUBAL3A6NHL2 446 aa13.02□□□□□ -0.33
LIMS1-206ENST00000414829 ZNF716A6NP11 495 aa13.02□□□□□ -0.33
LIMS1-206ENST00000414829 FTCDNL1E5RQL4 147 aa13.02□□□□□ -0.33
LIMS1-206ENST00000414829 C16orf97H3BN30 126 aa13.02□□□□□ -0.33
LIMS1-206ENST00000414829 GYG2O15488 501 aa13.02□□□□□ -0.33
LIMS1-206ENST00000414829 MRPL33O75394 65 aaKnown RBP13.02□□□□□ -0.33
LIMS1-206ENST00000414829 AKR7A3O95154 331 aa13.02□□□□□ -0.33
LIMS1-206ENST00000414829 NQO1P15559 274 aaKnown RBP13.02□□□□□ -0.33
LIMS1-206ENST00000414829 NCK1P16333 377 aa13.02□□□□□ -0.33
LIMS1-206ENST00000414829 SSTR2P30874 369 aa13.02□□□□□ -0.33
LIMS1-206ENST00000414829 KIR2DL3P43628 341 aa13.02□□□□□ -0.33
LIMS1-206ENST00000414829 OR1E2P47887 323 aa13.02□□□□□ -0.33
LIMS1-206ENST00000414829 OR3A2P47893 321 aa13.02□□□□□ -0.33
LIMS1-206ENST00000414829 SLC17A1Q14916 467 aa13.02□□□□□ -0.33
LIMS1-206ENST00000414829 P2RY6Q15077 328 aa13.02□□□□□ -0.33
LIMS1-206ENST00000414829 TFAP2EQ6VUC0 442 aa13.02□□□□□ -0.33
LIMS1-206ENST00000414829 H1FNTQ75WM6 255 aaPredicted RBP13.02□□□□□ -0.33
LIMS1-206ENST00000414829 ABHD12BQ7Z5M8 362 aaPredicted RBP13.02□□□□□ -0.33
LIMS1-206ENST00000414829 VTCN1Q7Z7D3 282 aa13.02□□□□□ -0.33
LIMS1-206ENST00000414829 GPAT4Q86UL3 456 aa13.02□□□□□ -0.33
LIMS1-206ENST00000414829 RBM45Q8IUH3 476 aaKnown RBP13.02□□□□□ -0.33
LIMS1-206ENST00000414829 ZNF100Q8IYN0 542 aa13.02□□□□□ -0.33
LIMS1-206ENST00000414829 FAM222BQ8WU58 562 aa13.02□□□□□ -0.33
LIMS1-206ENST00000414829 MARVELD3Q96A59 401 aa13.02□□□□□ -0.33
LIMS1-206ENST00000414829 TMEM45BQ96B21 275 aa13.02□□□□□ -0.33
LIMS1-206ENST00000414829 APH1AQ96BI3 265 aa13.02□□□□□ -0.33
LIMS1-206ENST00000414829 SLC25A36Q96CQ1 311 aa13.02□□□□□ -0.33
LIMS1-206ENST00000414829 C14orf79Q96F83 325 aa13.02□□□□□ -0.33
LIMS1-206ENST00000414829 WFDC6Q9BQY6 131 aa13.02□□□□□ -0.33
LIMS1-206ENST00000414829 FNDC11Q9BVV2 318 aa13.02□□□□□ -0.33
LIMS1-206ENST00000414829 HDHD5Q9BXW7 423 aa13.02□□□□□ -0.33
LIMS1-206ENST00000414829 OPN3Q9H1Y3 402 aaPredicted RBP13.02□□□□□ -0.33
LIMS1-206ENST00000414829 FKRPQ9H9S5 495 aa13.02□□□□□ -0.33
LIMS1-206ENST00000414829 KRCC1Q9NPI7 259 aaPredicted RBP13.02□□□□□ -0.33
LIMS1-206ENST00000414829 RIMS3Q9UJD0 308 aa13.02□□□□□ -0.33
LIMS1-206ENST00000414829 HEATR5AQ86XA9 2040 aa13.01□□□□□ -0.33
LIMS1-206ENST00000414829 LOC102725191A0A1B0GVB3 256 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms