RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 NPPAP01160 153 aa9.91□□□□□ -0.82
RFFL-204ENST00000414419 PNMTP11086 282 aa9.91□□□□□ -0.82
RFFL-204ENST00000414419 GGT1P19440 569 aa9.91□□□□□ -0.82
RFFL-204ENST00000414419 IGHV1-2P23083 117 aa9.91□□□□□ -0.82
RFFL-204ENST00000414419 ADSLP30566 484 aaPredicted RBP9.91□□□□□ -0.82
RFFL-204ENST00000414419 RPS5P46782 204 aaKnown RBP9.91□□□□□ -0.82
RFFL-204ENST00000414419 FAPQ12884 760 aa9.91□□□□□ -0.82
RFFL-204ENST00000414419 SELPLGQ14242 412 aa9.91□□□□□ -0.82
RFFL-204ENST00000414419 SLC17A1Q14916 467 aa9.91□□□□□ -0.82
RFFL-204ENST00000414419 TAB1Q15750 504 aa9.91□□□□□ -0.82
RFFL-204ENST00000414419 ACKR1Q16570 336 aa9.91□□□□□ -0.82
RFFL-204ENST00000414419 GLIPR1L2Q4G1C9 344 aa9.91□□□□□ -0.82
RFFL-204ENST00000414419 COQ5Q5HYK3 327 aa9.91□□□□□ -0.82
RFFL-204ENST00000414419 ALG10BQ5I7T1 473 aa9.91□□□□□ -0.82
RFFL-204ENST00000414419 NANOGP8Q6NSW7 305 aa9.91□□□□□ -0.82
RFFL-204ENST00000414419 CGB2Q6NT52 195 aa9.91□□□□□ -0.82
RFFL-204ENST00000414419 ULK3Q6PHR2 472 aa9.91□□□□□ -0.82
RFFL-204ENST00000414419 C5orf46Q6UWT4 87 aa9.91□□□□□ -0.82
RFFL-204ENST00000414419 SSX8Q7RTT4 187 aa9.91□□□□□ -0.82
RFFL-204ENST00000414419 PATL1Q86TB9 770 aaKnown RBP9.91□□□□□ -0.82
RFFL-204ENST00000414419 P2RY8Q86VZ1 359 aa9.91□□□□□ -0.82
RFFL-204ENST00000414419 PTOV1Q86YD1 416 aa9.91□□□□□ -0.82
RFFL-204ENST00000414419 LSMEM1Q8N8F7 131 aa9.91□□□□□ -0.82
RFFL-204ENST00000414419 SMYD1Q8NB12 490 aa9.91□□□□□ -0.82
RFFL-204ENST00000414419 MFSD8Q8NHS3 518 aa9.91□□□□□ -0.82
RFFL-204ENST00000414419 SLC38A4Q969I6 547 aa9.91□□□□□ -0.82
RFFL-204ENST00000414419 PIGTQ969N2 578 aa9.91□□□□□ -0.82
RFFL-204ENST00000414419 LRRC58Q96CX6 371 aa9.91□□□□□ -0.82
RFFL-204ENST00000414419 SLC47A1Q96FL8 570 aa9.91□□□□□ -0.82
RFFL-204ENST00000414419 HS3ST6Q96QI5 342 aa9.91□□□□□ -0.82
RFFL-204ENST00000414419 KAT8Q9H7Z6 458 aaKnown RBP9.91□□□□□ -0.82
RFFL-204ENST00000414419 NANOGQ9H9S0 305 aa9.91□□□□□ -0.82
RFFL-204ENST00000414419 BEX4Q9NWD9 120 aaPredicted RBP9.91□□□□□ -0.82
RFFL-204ENST00000414419 GID8Q9NWU2 228 aa9.91□□□□□ -0.82
RFFL-204ENST00000414419 FLVCR1Q9Y5Y0 555 aa9.91□□□□□ -0.82
RFFL-204ENST00000414419 CAPN7Q9Y6W3 813 aa9.91□□□□□ -0.82
RFFL-204ENST00000414419 ITPR3Q14573 2671 aa9.91□□□□□ -0.82
RFFL-204ENST00000414419 CELSR1Q9NYQ6 3014 aa9.91□□□□□ -0.82
RFFL-204ENST00000414419 TEP1Q99973 2627 aaKnown RBP9.9□□□□□ -0.82
RFFL-204ENST00000414419 CADP27708 2225 aa9.9□□□□□ -0.82
RFFL-204ENST00000414419 A0A1B0GWA3 101 aa9.9□□□□□ -0.82
RFFL-204ENST00000414419 TMEM229AB2RXF0 380 aa9.9□□□□□ -0.82
RFFL-204ENST00000414419 FBP2O00757 339 aa9.9□□□□□ -0.82
RFFL-204ENST00000414419 RAD51DO75771 328 aa9.9□□□□□ -0.82
RFFL-204ENST00000414419 KRT33AO76009 404 aa9.9□□□□□ -0.82
RFFL-204ENST00000414419 MFN2O95140 757 aa9.9□□□□□ -0.82
RFFL-204ENST00000414419 CD3EP07766 207 aa9.9□□□□□ -0.82
RFFL-204ENST00000414419 CD53P19397 219 aa9.9□□□□□ -0.82
RFFL-204ENST00000414419 EDNRAP25101 427 aa9.9□□□□□ -0.82
RFFL-204ENST00000414419 HTR2AP28223 471 aa9.9□□□□□ -0.82
RFFL-204ENST00000414419 PCGF2P35227 344 aa9.9□□□□□ -0.82
RFFL-204ENST00000414419 DMTNQ08495 405 aa9.9□□□□□ -0.82
RFFL-204ENST00000414419 PPA1Q15181 289 aa9.9□□□□□ -0.82
RFFL-204ENST00000414419 OR1Q1Q15612 314 aa9.9□□□□□ -0.82
RFFL-204ENST00000414419 TIMM23BQ5SRD1 257 aa9.9□□□□□ -0.82
RFFL-204ENST00000414419 FAM91A1Q658Y4 838 aa9.9□□□□□ -0.82
RFFL-204ENST00000414419 REP15Q6BDI9 236 aa9.9□□□□□ -0.82
RFFL-204ENST00000414419 OR7E24Q6IFN5 339 aa9.9□□□□□ -0.82
RFFL-204ENST00000414419 C6orf89Q6UWU4 347 aa9.9□□□□□ -0.82
RFFL-204ENST00000414419 ZNF704Q6ZNC4 412 aaPredicted RBP9.9□□□□□ -0.82
RFFL-204ENST00000414419 C20orf204Q6ZNR8 217 aa9.9□□□□□ -0.82
RFFL-204ENST00000414419 AAED1Q7RTV5 226 aa9.9□□□□□ -0.82
RFFL-204ENST00000414419 SNX32Q86XE0 403 aa9.9□□□□□ -0.82
RFFL-204ENST00000414419 ZNF433Q8N7K0 673 aaPredicted RBP9.9□□□□□ -0.82
RFFL-204ENST00000414419 OR9K2Q8NGE7 335 aa9.9□□□□□ -0.82
RFFL-204ENST00000414419 OR8J3Q8NGG0 315 aa9.9□□□□□ -0.82
RFFL-204ENST00000414419 RASSF5Q8WWW0 418 aa9.9□□□□□ -0.82
RFFL-204ENST00000414419 EPYCQ99645 322 aa9.9□□□□□ -0.82
RFFL-204ENST00000414419 CCL19Q99731 98 aa9.9□□□□□ -0.82
RFFL-204ENST00000414419 CXXC4Q9H2H0 198 aa9.9□□□□□ -0.82
RFFL-204ENST00000414419 PIF1Q9H611 641 aa9.9□□□□□ -0.82
RFFL-204ENST00000414419 TAS2R16Q9NYV7 291 aa9.9□□□□□ -0.82
RFFL-204ENST00000414419 RASD1Q9Y272 281 aa9.9□□□□□ -0.82
RFFL-204ENST00000414419 SLC22A2O15244 555 aa9.89□□□□□ -0.83
RFFL-204ENST00000414419 CLOCKO15516 846 aa9.89□□□□□ -0.83
RFFL-204ENST00000414419 CCDC22O60826 627 aa9.89□□□□□ -0.83
RFFL-204ENST00000414419 SMPD2O60906 423 aa9.89□□□□□ -0.83
RFFL-204ENST00000414419 NPIPB7O75200 414 aa9.89□□□□□ -0.83
RFFL-204ENST00000414419 LGI1O95970 557 aa9.89□□□□□ -0.83
RFFL-204ENST00000414419 OPN1SWP03999 348 aa9.89□□□□□ -0.83
RFFL-204ENST00000414419 C8BP07358 591 aa9.89□□□□□ -0.83
RFFL-204ENST00000414419 ZNF43P17038 809 aa9.89□□□□□ -0.83
RFFL-204ENST00000414419 COX5AP20674 150 aa9.89□□□□□ -0.83
RFFL-204ENST00000414419 PCBP3P57721 371 aaKnown RBP9.89□□□□□ -0.83
RFFL-204ENST00000414419 IL1RL1Q01638 556 aa9.89□□□□□ -0.83
RFFL-204ENST00000414419 TGFBR3Q03167 851 aa9.89□□□□□ -0.83
RFFL-204ENST00000414419 EGR4Q05215 589 aa9.89□□□□□ -0.83
RFFL-204ENST00000414419 MFSD13AQ14CX5 517 aa9.89□□□□□ -0.83
RFFL-204ENST00000414419 DUSP7Q16829 419 aa9.89□□□□□ -0.83
RFFL-204ENST00000414419 VMACQ2NL98 169 aa9.89□□□□□ -0.83
RFFL-204ENST00000414419 FAM69AQ5T7M9 428 aa9.89□□□□□ -0.83
RFFL-204ENST00000414419 ABHD12BQ7Z5M8 362 aaPredicted RBP9.89□□□□□ -0.83
RFFL-204ENST00000414419 NET1Q7Z628 596 aaPredicted RBP9.89□□□□□ -0.83
RFFL-204ENST00000414419 COMTD1Q86VU5 262 aa9.89□□□□□ -0.83
RFFL-204ENST00000414419 LSRQ86X29 649 aaPredicted RBP9.89□□□□□ -0.83
RFFL-204ENST00000414419 P3H2Q8IVL5 708 aa9.89□□□□□ -0.83
RFFL-204ENST00000414419 TMEM45BQ96B21 275 aa9.89□□□□□ -0.83
RFFL-204ENST00000414419 KTI12Q96EK9 354 aaPredicted RBP9.89□□□□□ -0.83
RFFL-204ENST00000414419 MCHR1Q99705 422 aa9.89□□□□□ -0.83
RFFL-204ENST00000414419 PRR14Q9BWN1 585 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms