RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 TTC9BQ8N6N2 239 aa16.44■□□□□ 0.22
SMPD4-202ENST00000409031 DOK4Q8TEW6 326 aa16.44■□□□□ 0.22
SMPD4-202ENST00000409031 FRZBQ92765 325 aa16.44■□□□□ 0.22
SMPD4-202ENST00000409031 HAS2Q92819 552 aa16.44■□□□□ 0.22
SMPD4-202ENST00000409031 CYB5R1Q9UHQ9 305 aa16.44■□□□□ 0.22
SMPD4-202ENST00000409031 YKT6O15498 198 aa16.43■□□□□ 0.22
SMPD4-202ENST00000409031 CLRN1P58418 232 aa16.43■□□□□ 0.22
SMPD4-202ENST00000409031 PNPLA2Q96AD5 504 aa16.43■□□□□ 0.22
SMPD4-202ENST00000409031 PRRG4Q9BZD6 226 aa16.43■□□□□ 0.22
SMPD4-202ENST00000409031 CHST2Q9Y4C5 530 aa16.43■□□□□ 0.22
SMPD4-202ENST00000409031 DCST2Q5T1A1 773 aa16.43■□□□□ 0.22
SMPD4-202ENST00000409031 OR5M10Q6IEU7 315 aa16.43■□□□□ 0.22
SMPD4-202ENST00000409031 RAB39BQ96DA2 213 aa16.43■□□□□ 0.22
SMPD4-202ENST00000409031 ST6GALNAC5Q9BVH7 336 aa16.43■□□□□ 0.22
SMPD4-202ENST00000409031 LHX3Q9UBR4 397 aa16.43■□□□□ 0.22
SMPD4-202ENST00000409031 A0A1B0GTL3 188 aa16.43■□□□□ 0.22
SMPD4-202ENST00000409031 IGFBP1P08833 259 aaPredicted RBP16.43■□□□□ 0.22
SMPD4-202ENST00000409031 RNH1P13489 461 aaKnown RBP16.43■□□□□ 0.22
SMPD4-202ENST00000409031 HIST1H1TP22492 207 aaPredicted RBP16.43■□□□□ 0.22
SMPD4-202ENST00000409031 TEAD1P28347 426 aa16.43■□□□□ 0.22
SMPD4-202ENST00000409031 PRICKLE2Q7Z3G6 844 aa16.43■□□□□ 0.22
SMPD4-202ENST00000409031 CHST14Q8NCH0 376 aa16.43■□□□□ 0.22
SMPD4-202ENST00000409031 RNF208Q9H0X6 261 aa16.43■□□□□ 0.22
SMPD4-202ENST00000409031 CBY1Q9Y3M2 126 aa16.43■□□□□ 0.22
SMPD4-202ENST00000409031 CRTAPO75718 401 aaPredicted RBP16.42■□□□□ 0.22
SMPD4-202ENST00000409031 SBK2P0C263 348 aa16.42■□□□□ 0.22
SMPD4-202ENST00000409031 SLC6A11P48066 632 aa16.42■□□□□ 0.22
SMPD4-202ENST00000409031 GATMP50440 423 aa16.42■□□□□ 0.22
SMPD4-202ENST00000409031 CTSCP53634 463 aa16.42■□□□□ 0.22
SMPD4-202ENST00000409031 NAXDQ8IW45 347 aa16.42■□□□□ 0.22
SMPD4-202ENST00000409031 KCNRGQ8N5I3 272 aa16.42■□□□□ 0.22
SMPD4-202ENST00000409031 ISG20Q96AZ6 181 aaKnown RBP16.42■□□□□ 0.22
SMPD4-202ENST00000409031 SORCS2Q96PQ0 1159 aa16.42■□□□□ 0.22
SMPD4-202ENST00000409031 STEAP1Q9UHE8 339 aa16.42■□□□□ 0.22
SMPD4-202ENST00000409031 EXO1Q9UQ84 846 aaKnown RBP16.42■□□□□ 0.22
SMPD4-202ENST00000409031 CLUP10909 449 aa16.42■□□□□ 0.22
SMPD4-202ENST00000409031 ELNP15502 786 aa16.42■□□□□ 0.22
SMPD4-202ENST00000409031 ZNF16P17020 682 aaPredicted RBP16.42■□□□□ 0.22
SMPD4-202ENST00000409031 RAB33AQ14088 237 aa16.42■□□□□ 0.22
SMPD4-202ENST00000409031 GPR18Q14330 331 aa16.42■□□□□ 0.22
SMPD4-202ENST00000409031 TRAPPC6BQ86SZ2 158 aa16.42■□□□□ 0.22
SMPD4-202ENST00000409031 RNF128Q8TEB7 428 aa16.42■□□□□ 0.22
SMPD4-202ENST00000409031 ASB17Q8WXJ9 295 aa16.42■□□□□ 0.22
SMPD4-202ENST00000409031 C16orf58Q96GQ5 468 aa16.42■□□□□ 0.22
SMPD4-202ENST00000409031 CPEB1Q9BZB8 566 aaKnown RBP16.42■□□□□ 0.22
SMPD4-202ENST00000409031 SLC25A31Q9H0C2 315 aa16.42■□□□□ 0.22
SMPD4-202ENST00000409031 CHST8Q9H2A9 424 aa16.42■□□□□ 0.22
SMPD4-202ENST00000409031 TLR9Q9NR96 1032 aa16.42■□□□□ 0.22
SMPD4-202ENST00000409031 SPHK2Q9NRA0 654 aa16.42■□□□□ 0.22
SMPD4-202ENST00000409031 ZNF593O00488 134 aaPredicted RBP16.42■□□□□ 0.22
SMPD4-202ENST00000409031 FABP1P07148 127 aa16.42■□□□□ 0.22
SMPD4-202ENST00000409031 C6P13671 934 aa16.42■□□□□ 0.22
SMPD4-202ENST00000409031 CRYBB2P43320 205 aa16.42■□□□□ 0.22
SMPD4-202ENST00000409031 MMP15P51511 669 aa16.42■□□□□ 0.22
SMPD4-202ENST00000409031 GLO1Q04760 184 aa16.42■□□□□ 0.22
SMPD4-202ENST00000409031 GPR139Q6DWJ6 353 aa16.42■□□□□ 0.22
SMPD4-202ENST00000409031 SLC43A2Q8N370 569 aa16.42■□□□□ 0.22
SMPD4-202ENST00000409031 OR51T1Q8NGJ9 327 aa16.42■□□□□ 0.22
SMPD4-202ENST00000409031 OR5D14Q8NGL3 314 aa16.42■□□□□ 0.22
SMPD4-202ENST00000409031 SMIM4Q8WVI0 70 aa16.42■□□□□ 0.22
SMPD4-202ENST00000409031 TANKQ92844 425 aa16.42■□□□□ 0.22
SMPD4-202ENST00000409031 FAM83CQ9BQN1 747 aa16.42■□□□□ 0.22
SMPD4-202ENST00000409031 FLVCR2Q9UPI3 526 aa16.42■□□□□ 0.22
SMPD4-202ENST00000409031 MOKQ9UQ07 419 aa16.42■□□□□ 0.22
SMPD4-202ENST00000409031 IGLV3-10A0A075B6K4 115 aa16.42■□□□□ 0.22
SMPD4-202ENST00000409031 SOD2P04179 222 aa16.42■□□□□ 0.22
SMPD4-202ENST00000409031 BMPR1AP36894 532 aa16.42■□□□□ 0.22
SMPD4-202ENST00000409031 PRLHRP49683 370 aa16.42■□□□□ 0.22
SMPD4-202ENST00000409031 PRRT3Q5FWE3 981 aa16.42■□□□□ 0.22
SMPD4-202ENST00000409031 OTUD1Q5VV17 481 aaPredicted RBP16.42■□□□□ 0.22
SMPD4-202ENST00000409031 CDCP1Q9H5V8 836 aa16.42■□□□□ 0.22
SMPD4-202ENST00000409031 SLC25A19Q9HC21 320 aa16.42■□□□□ 0.22
SMPD4-202ENST00000409031 OR5H14A6NHG9 310 aa16.41■□□□□ 0.22
SMPD4-202ENST00000409031 UPK1AO00322 258 aa16.41■□□□□ 0.22
SMPD4-202ENST00000409031 AQP8O94778 261 aa16.41■□□□□ 0.22
SMPD4-202ENST00000409031 HTR3BO95264 441 aa16.41■□□□□ 0.22
SMPD4-202ENST00000409031 HBE1P02100 147 aa16.41■□□□□ 0.22
SMPD4-202ENST00000409031 MMP2P08253 660 aa16.41■□□□□ 0.22
SMPD4-202ENST00000409031 HTR2CP28335 458 aa16.41■□□□□ 0.22
SMPD4-202ENST00000409031 MAP2K6P52564 334 aa16.41■□□□□ 0.22
SMPD4-202ENST00000409031 EMP2P54851 167 aa16.41■□□□□ 0.22
SMPD4-202ENST00000409031 GRM7Q14831 915 aa16.41■□□□□ 0.22
SMPD4-202ENST00000409031 FRMD1Q8N878 549 aa16.41■□□□□ 0.22
SMPD4-202ENST00000409031 FBXW5Q969U6 566 aa16.41■□□□□ 0.22
SMPD4-202ENST00000409031 NIPSNAP3BQ9BS92 247 aa16.41■□□□□ 0.22
SMPD4-202ENST00000409031 SLC7A11Q9UPY5 501 aa16.41■□□□□ 0.22
SMPD4-202ENST00000409031 A0A087WUU8 490 aa16.41■□□□□ 0.22
SMPD4-202ENST00000409031 RBM39Q14498 530 aaKnown RBP16.41■□□□□ 0.22
SMPD4-202ENST00000409031 TCTN3Q6NUS6 607 aa16.41■□□□□ 0.22
SMPD4-202ENST00000409031 ZNF852Q6ZMS4 543 aa16.41■□□□□ 0.22
SMPD4-202ENST00000409031 NLGN4YQ8NFZ3 816 aaPredicted RBP16.41■□□□□ 0.22
SMPD4-202ENST00000409031 OR4D10Q8NGI6 311 aa16.41■□□□□ 0.22
SMPD4-202ENST00000409031 TEAD3Q99594 435 aa16.41■□□□□ 0.22
SMPD4-202ENST00000409031 TRAF4Q9BUZ4 470 aaPredicted RBP16.41■□□□□ 0.22
SMPD4-202ENST00000409031 PURGQ9UJV8 347 aaKnown RBP16.41■□□□□ 0.22
SMPD4-202ENST00000409031 CBLCQ9ULV8 474 aa16.41■□□□□ 0.22
SMPD4-202ENST00000409031 LATO43561 262 aa16.41■□□□□ 0.22
SMPD4-202ENST00000409031 ZNF250P15622 560 aa16.41■□□□□ 0.22
SMPD4-202ENST00000409031 HTRA4P83105 476 aaPredicted RBP16.41■□□□□ 0.22
SMPD4-202ENST00000409031 ACSM1Q08AH1 577 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms