RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 MAKP20794 623 aa29.81■■■□□ 2.36
CSNK1E-204ENST00000403904 GPR4P46093 362 aa29.81■■■□□ 2.36
CSNK1E-204ENST00000403904 GK3PQ14409 553 aa29.81■■■□□ 2.36
CSNK1E-204ENST00000403904 Q6ZPB1 254 aaPredicted RBP29.81■■■□□ 2.36
CSNK1E-204ENST00000403904 ZER1Q7Z7L7 766 aa29.81■■■□□ 2.36
CSNK1E-204ENST00000403904 DOLPP1Q86YN1 238 aa29.81■■■□□ 2.36
CSNK1E-204ENST00000403904 LRRC17Q8N6Y2 441 aa29.81■■■□□ 2.36
CSNK1E-204ENST00000403904 PAQR5Q9NXK6 330 aaPredicted RBP29.81■■■□□ 2.36
CSNK1E-204ENST00000403904 PDP1Q9P0J1 537 aaPredicted RBP29.81■■■□□ 2.36
CSNK1E-204ENST00000403904 MAGED1Q9Y5V3 778 aaPredicted RBP29.81■■■□□ 2.36
CSNK1E-204ENST00000403904 KDM4EB2RXH2 506 aaPredicted RBP29.81■■■□□ 2.36
CSNK1E-204ENST00000403904 IGF2P01344 180 aa29.81■■■□□ 2.36
CSNK1E-204ENST00000403904 KLK2P20151 261 aa29.81■■■□□ 2.36
CSNK1E-204ENST00000403904 OMPP47874 163 aa29.81■■■□□ 2.36
CSNK1E-204ENST00000403904 SLC35A1P78382 337 aa29.81■■■□□ 2.36
CSNK1E-204ENST00000403904 C3P1Q6ZMU1 363 aa29.81■■■□□ 2.36
CSNK1E-204ENST00000403904 SLC46A3Q7Z3Q1 461 aa29.81■■■□□ 2.36
CSNK1E-204ENST00000403904 CDK20Q8IZL9 346 aa29.81■■■□□ 2.36
CSNK1E-204ENST00000403904 OR6S1Q8NH40 331 aa29.81■■■□□ 2.36
CSNK1E-204ENST00000403904 GIPC3Q8TF64 312 aa29.81■■■□□ 2.36
CSNK1E-204ENST00000403904 CPNE4Q96A23 557 aaPredicted RBP29.81■■■□□ 2.36
CSNK1E-204ENST00000403904 SEC14L4Q9UDX3 406 aa29.81■■■□□ 2.36
CSNK1E-204ENST00000403904 TINAGQ9UJW2 476 aa29.81■■■□□ 2.36
CSNK1E-204ENST00000403904 IGHV3-15A0A0B4J1V0 119 aa29.8■■■□□ 2.36
CSNK1E-204ENST00000403904 FIGNL2A6NMB9 653 aa29.8■■■□□ 2.36
CSNK1E-204ENST00000403904 FUT1P19526 365 aa29.8■■■□□ 2.36
CSNK1E-204ENST00000403904 GRPRP30550 384 aa29.8■■■□□ 2.36
CSNK1E-204ENST00000403904 PON3Q15166 354 aa29.8■■■□□ 2.36
CSNK1E-204ENST00000403904 ZNF770Q6IQ21 691 aaPredicted RBP29.8■■■□□ 2.36
CSNK1E-204ENST00000403904 SHQ1Q6PI26 577 aaKnown RBP29.8■■■□□ 2.36
CSNK1E-204ENST00000403904 ICA1LQ8NDH6 482 aa29.8■■■□□ 2.36
CSNK1E-204ENST00000403904 OR10G2Q8NGC3 310 aa29.8■■■□□ 2.36
CSNK1E-204ENST00000403904 TRIB1Q96RU8 372 aa29.8■■■□□ 2.36
CSNK1E-204ENST00000403904 NANSQ9NR45 359 aa29.8■■■□□ 2.36
CSNK1E-204ENST00000403904 SH3BGRL2Q9UJC5 107 aa29.8■■■□□ 2.36
CSNK1E-204ENST00000403904 WDR1O75083 606 aa29.79■■■□□ 2.36
CSNK1E-204ENST00000403904 AKR7A3O95154 331 aa29.79■■■□□ 2.36
CSNK1E-204ENST00000403904 MT-ATP6P00846 226 aa29.79■■■□□ 2.36
CSNK1E-204ENST00000403904 GABRA1P14867 456 aa29.79■■■□□ 2.36
CSNK1E-204ENST00000403904 ZNF23P17027 643 aa29.79■■■□□ 2.36
CSNK1E-204ENST00000403904 ENPP1P22413 925 aa29.79■■■□□ 2.36
CSNK1E-204ENST00000403904 PRKACGP22612 351 aa29.79■■■□□ 2.36
CSNK1E-204ENST00000403904 GTF2E2P29084 291 aaKnown RBP29.79■■■□□ 2.36
CSNK1E-204ENST00000403904 ARHGDIAP52565 204 aa29.79■■■□□ 2.36
CSNK1E-204ENST00000403904 ZNF239Q16600 458 aaKnown RBP29.79■■■□□ 2.36
CSNK1E-204ENST00000403904 ACSF3Q4G176 576 aaPredicted RBP29.79■■■□□ 2.36
CSNK1E-204ENST00000403904 PGBD2Q6P3X8 592 aa29.79■■■□□ 2.36
CSNK1E-204ENST00000403904 ADGRE4PQ86SQ3 457 aa29.79■■■□□ 2.36
CSNK1E-204ENST00000403904 LINC00471Q8N535 108 aa29.79■■■□□ 2.36
CSNK1E-204ENST00000403904 OR5K1Q8NHB7 308 aa29.79■■■□□ 2.36
CSNK1E-204ENST00000403904 ROBO4Q8WZ75 1007 aa29.79■■■□□ 2.36
CSNK1E-204ENST00000403904 UCN2Q96RP3 112 aa29.79■■■□□ 2.36
CSNK1E-204ENST00000403904 GPA33Q99795 319 aa29.79■■■□□ 2.36
CSNK1E-204ENST00000403904 KRCC1Q9NPI7 259 aaPredicted RBP29.79■■■□□ 2.36
CSNK1E-204ENST00000403904 RELNP78509 3460 aa29.79■■■□□ 2.36
CSNK1E-204ENST00000403904 POLEQ07864 2286 aa29.78■■■□□ 2.36
CSNK1E-204ENST00000403904 OR7A10O76100 309 aa29.78■■■□□ 2.36
CSNK1E-204ENST00000403904 ANPEPP15144 967 aa29.78■■■□□ 2.36
CSNK1E-204ENST00000403904 TMEM99Q8N816 258 aa29.78■■■□□ 2.36
CSNK1E-204ENST00000403904 FNDC9Q8TBE3 224 aa29.78■■■□□ 2.36
CSNK1E-204ENST00000403904 DCLRE1BQ9H816 532 aa29.78■■■□□ 2.36
CSNK1E-204ENST00000403904 FKRPQ9H9S5 495 aa29.78■■■□□ 2.36
CSNK1E-204ENST00000403904 C6orf203Q9P0P8 240 aaPredicted RBP29.78■■■□□ 2.36
CSNK1E-204ENST00000403904 TMEM5Q9Y2B1 443 aa29.78■■■□□ 2.36
CSNK1E-204ENST00000403904 HTR3EA5X5Y0 456 aa29.77■■■□□ 2.36
CSNK1E-204ENST00000403904 ZNF814B7Z6K7 855 aa29.77■■■□□ 2.36
CSNK1E-204ENST00000403904 M0R082 166 aa29.77■■■□□ 2.36
CSNK1E-204ENST00000403904 CDC42EP2O14613 210 aa29.77■■■□□ 2.36
CSNK1E-204ENST00000403904 SYNGR4O95473 234 aa29.77■■■□□ 2.36
CSNK1E-204ENST00000403904 GASTP01350 101 aa29.77■■■□□ 2.36
CSNK1E-204ENST00000403904 SAGP10523 405 aaPredicted RBP29.77■■■□□ 2.36
CSNK1E-204ENST00000403904 ACVR2AP27037 513 aa29.77■■■□□ 2.36
CSNK1E-204ENST00000403904 IFNGR2P38484 337 aa29.77■■■□□ 2.36
CSNK1E-204ENST00000403904 MFSD13AQ14CX5 517 aa29.77■■■□□ 2.36
CSNK1E-204ENST00000403904 C1orf94Q6P1W5 598 aa29.77■■■□□ 2.36
CSNK1E-204ENST00000403904 RPTNQ6XPR3 784 aa29.77■■■□□ 2.36
CSNK1E-204ENST00000403904 TMPRSS11FQ6ZWK6 438 aa29.77■■■□□ 2.36
CSNK1E-204ENST00000403904 MAMDC2Q7Z304 686 aaPredicted RBP29.77■■■□□ 2.36
CSNK1E-204ENST00000403904 AQP11Q8NBQ7 271 aa29.77■■■□□ 2.36
CSNK1E-204ENST00000403904 ZNF417Q8TAU3 575 aa29.77■■■□□ 2.36
CSNK1E-204ENST00000403904 ZHX1-C8orf76Q96EF9 292 aa29.77■■■□□ 2.36
CSNK1E-204ENST00000403904 NRBF2Q96F24 287 aa29.77■■■□□ 2.36
CSNK1E-204ENST00000403904 ZNF587Q96SQ5 575 aaPredicted RBP29.77■■■□□ 2.36
CSNK1E-204ENST00000403904 TP63Q9H3D4 680 aaPredicted RBP29.77■■■□□ 2.36
CSNK1E-204ENST00000403904 ZNF229Q9UJW7 825 aa29.77■■■□□ 2.36
CSNK1E-204ENST00000403904 MCTS1Q9ULC4 181 aaKnown RBP29.77■■■□□ 2.36
CSNK1E-204ENST00000403904 OAZ3Q9UMX2 235 aa29.77■■■□□ 2.36
CSNK1E-204ENST00000403904 OSGIN2Q9Y236 505 aa29.77■■■□□ 2.36
CSNK1E-204ENST00000403904 SAC3D1A6NKF1 404 aa29.77■■■□□ 2.36
CSNK1E-204ENST00000403904 EFCAB9A8MZ26 197 aa29.77■■■□□ 2.36
CSNK1E-204ENST00000403904 G3V2T6 193 aa29.77■■■□□ 2.36
CSNK1E-204ENST00000403904 SMAD9O15198 467 aaKnown RBP29.77■■■□□ 2.36
CSNK1E-204ENST00000403904 DNPH1O43598 174 aa29.77■■■□□ 2.36
CSNK1E-204ENST00000403904 EIF1BO60739 113 aaKnown RBP29.77■■■□□ 2.36
CSNK1E-204ENST00000403904 POU2F1P14859 743 aa29.77■■■□□ 2.36
CSNK1E-204ENST00000403904 AGFG1P52594 562 aaKnown RBP29.77■■■□□ 2.36
CSNK1E-204ENST00000403904 H3F3AP84243 136 aa29.77■■■□□ 2.36
CSNK1E-204ENST00000403904 RTL6Q6ICC9 239 aa29.77■■■□□ 2.36
CSNK1E-204ENST00000403904 PAQR6Q6TCH4 344 aa29.77■■■□□ 2.36
CSNK1E-204ENST00000403904 CCDC103Q8IW40 242 aa29.77■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 121.7 ms