RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 J3QKU1 62 aa14.26□□□□□ -0.13
HMGA1-204ENST00000401473 RAMP1O60894 148 aa14.26□□□□□ -0.13
HMGA1-204ENST00000401473 TOXO94900 526 aa14.26□□□□□ -0.13
HMGA1-204ENST00000401473 HOXB6P17509 224 aaKnown RBP14.26□□□□□ -0.13
HMGA1-204ENST00000401473 IDUAP35475 653 aa14.26□□□□□ -0.13
HMGA1-204ENST00000401473 ZNF239Q16600 458 aaKnown RBP14.26□□□□□ -0.13
HMGA1-204ENST00000401473 EXOC3L2Q2M3D2 409 aa14.26□□□□□ -0.13
HMGA1-204ENST00000401473 NSUN5P2Q63ZY6 315 aa14.26□□□□□ -0.13
HMGA1-204ENST00000401473 ZNF730Q6ZMV8 503 aa14.26□□□□□ -0.13
HMGA1-204ENST00000401473 CHMP1BQ7LBR1 199 aa14.26□□□□□ -0.13
HMGA1-204ENST00000401473 CCDC103Q8IW40 242 aa14.26□□□□□ -0.13
HMGA1-204ENST00000401473 MARVELD2Q8N4S9 558 aa14.26□□□□□ -0.13
HMGA1-204ENST00000401473 LRTOMTQ8WZ04 291 aa14.26□□□□□ -0.13
HMGA1-204ENST00000401473 TP63Q9H3D4 680 aaPredicted RBP14.26□□□□□ -0.13
HMGA1-204ENST00000401473 MED31Q9Y3C7 131 aa14.26□□□□□ -0.13
HMGA1-204ENST00000401473 SH3PXD2BA1X283 911 aa14.25□□□□□ -0.13
HMGA1-204ENST00000401473 ENO4A6NNW6 628 aa14.25□□□□□ -0.13
HMGA1-204ENST00000401473 TNFRSF11BO00300 401 aa14.25□□□□□ -0.13
HMGA1-204ENST00000401473 CLOCKO15516 846 aa14.25□□□□□ -0.13
HMGA1-204ENST00000401473 OR2T1O43869 369 aa14.25□□□□□ -0.13
HMGA1-204ENST00000401473 AKR7A3O95154 331 aa14.25□□□□□ -0.13
HMGA1-204ENST00000401473 AHSA1O95433 338 aa14.25□□□□□ -0.13
HMGA1-204ENST00000401473 CH25HO95992 272 aa14.25□□□□□ -0.13
HMGA1-204ENST00000401473 BGLAPP02818 100 aa14.25□□□□□ -0.13
HMGA1-204ENST00000401473 FUT1P19526 365 aa14.25□□□□□ -0.13
HMGA1-204ENST00000401473 AGFG1P52594 562 aaKnown RBP14.25□□□□□ -0.13
HMGA1-204ENST00000401473 OR2B6P58173 313 aa14.25□□□□□ -0.13
HMGA1-204ENST00000401473 SMIM11AP58511 58 aa14.25□□□□□ -0.13
HMGA1-204ENST00000401473 ZNF74Q16587 644 aa14.25□□□□□ -0.13
HMGA1-204ENST00000401473 PDSS1Q5T2R2 415 aa14.25□□□□□ -0.13
HMGA1-204ENST00000401473 C5orf46Q6UWT4 87 aa14.25□□□□□ -0.13
HMGA1-204ENST00000401473 MBOAT2Q6ZWT7 520 aa14.25□□□□□ -0.13
HMGA1-204ENST00000401473 RNF113BQ8IZP6 322 aaKnown RBP14.25□□□□□ -0.13
HMGA1-204ENST00000401473 TMEM99Q8N816 258 aa14.25□□□□□ -0.13
HMGA1-204ENST00000401473 CPNE4Q96A23 557 aaPredicted RBP14.25□□□□□ -0.13
HMGA1-204ENST00000401473 TTYH2Q9BSA4 534 aa14.25□□□□□ -0.13
HMGA1-204ENST00000401473 YY1AP1Q9H869 796 aa14.25□□□□□ -0.13
HMGA1-204ENST00000401473 CALHM2Q9HA72 323 aa14.25□□□□□ -0.13
HMGA1-204ENST00000401473 PAQR5Q9NXK6 330 aaPredicted RBP14.25□□□□□ -0.13
HMGA1-204ENST00000401473 CD8B2A6NJW9 211 aa14.25□□□□□ -0.13
HMGA1-204ENST00000401473 SMAD9O15198 467 aaKnown RBP14.25□□□□□ -0.13
HMGA1-204ENST00000401473 HNRNPRO43390 633 aaKnown RBP14.25□□□□□ -0.13
HMGA1-204ENST00000401473 MAKP20794 623 aa14.25□□□□□ -0.13
HMGA1-204ENST00000401473 P2RY4P51582 365 aa14.25□□□□□ -0.13
HMGA1-204ENST00000401473 CSNK2A1P68400 391 aaPredicted RBP14.25□□□□□ -0.13
HMGA1-204ENST00000401473 PRKCDQ05655 676 aa14.25□□□□□ -0.13
HMGA1-204ENST00000401473 C1orf185Q5T7R7 199 aa14.25□□□□□ -0.13
HMGA1-204ENST00000401473 HMBOX1Q6NT76 420 aa14.25□□□□□ -0.13
HMGA1-204ENST00000401473 B3GNT6Q6ZMB0 384 aa14.25□□□□□ -0.13
HMGA1-204ENST00000401473 SLC46A3Q7Z3Q1 461 aa14.25□□□□□ -0.13
HMGA1-204ENST00000401473 ZER1Q7Z7L7 766 aa14.25□□□□□ -0.13
HMGA1-204ENST00000401473 AMIGO2Q86SJ2 522 aa14.25□□□□□ -0.13
HMGA1-204ENST00000401473 C9orf106Q8NAJ2 232 aa14.25□□□□□ -0.13
HMGA1-204ENST00000401473 OR4K5Q8NGD3 323 aa14.25□□□□□ -0.13
HMGA1-204ENST00000401473 BPIFA2Q96DR5 249 aa14.25□□□□□ -0.13
HMGA1-204ENST00000401473 EPYCQ99645 322 aa14.25□□□□□ -0.13
HMGA1-204ENST00000401473 GPA33Q99795 319 aa14.25□□□□□ -0.13
HMGA1-204ENST00000401473 KLHL4Q9C0H6 718 aa14.25□□□□□ -0.13
HMGA1-204ENST00000401473 REEP1Q9H902 201 aa14.25□□□□□ -0.13
HMGA1-204ENST00000401473 TIGARQ9NQ88 270 aa14.25□□□□□ -0.13
HMGA1-204ENST00000401473 DNAJB9Q9UBS3 223 aa14.25□□□□□ -0.13
HMGA1-204ENST00000401473 SAMHD1Q9Y3Z3 626 aaKnown RBP14.25□□□□□ -0.13
HMGA1-204ENST00000401473 UTP20O75691 2785 aaKnown RBP14.24□□□□□ -0.13
HMGA1-204ENST00000401473 SLC22A20A6NK97 555 aa14.24□□□□□ -0.13
HMGA1-204ENST00000401473 CDC42EP2O14613 210 aa14.24□□□□□ -0.13
HMGA1-204ENST00000401473 FZD7O75084 574 aa14.24□□□□□ -0.13
HMGA1-204ENST00000401473 HOXD4P09016 255 aaPredicted RBP14.24□□□□□ -0.13
HMGA1-204ENST00000401473 GLI4P10075 376 aa14.24□□□□□ -0.13
HMGA1-204ENST00000401473 IFI30P13284 250 aa14.24□□□□□ -0.13
HMGA1-204ENST00000401473 PTGER4P35408 488 aa14.24□□□□□ -0.13
HMGA1-204ENST00000401473 OMPP47874 163 aa14.24□□□□□ -0.13
HMGA1-204ENST00000401473 CTBP2P56545 445 aa14.24□□□□□ -0.13
HMGA1-204ENST00000401473 SLC35A1P78382 337 aa14.24□□□□□ -0.13
HMGA1-204ENST00000401473 PMPCAQ10713 525 aa14.24□□□□□ -0.13
HMGA1-204ENST00000401473 PPP4R4Q6NUP7 873 aa14.24□□□□□ -0.13
HMGA1-204ENST00000401473 RRM2BQ7LG56 351 aa14.24□□□□□ -0.13
HMGA1-204ENST00000401473 HS3ST5Q8IZT8 346 aa14.24□□□□□ -0.13
HMGA1-204ENST00000401473 KDM8Q8N371 416 aa14.24□□□□□ -0.13
HMGA1-204ENST00000401473 ABHD3Q8WU67 409 aa14.24□□□□□ -0.13
HMGA1-204ENST00000401473 DMRTA2Q96SC8 542 aa14.24□□□□□ -0.13
HMGA1-204ENST00000401473 S100A14Q9HCY8 104 aa14.24□□□□□ -0.13
HMGA1-204ENST00000401473 ING1Q9UK53 422 aaPredicted RBP14.24□□□□□ -0.13
HMGA1-204ENST00000401473 MEMO1Q9Y316 297 aa14.24□□□□□ -0.13
HMGA1-204ENST00000401473 MAGED1Q9Y5V3 778 aaPredicted RBP14.24□□□□□ -0.13
HMGA1-204ENST00000401473 NCOA6Q14686 2063 aaPredicted RBP14.24□□□□□ -0.13
HMGA1-204ENST00000401473 E9PLN8 166 aa14.23□□□□□ -0.13
HMGA1-204ENST00000401473 CCL21O00585 134 aa14.23□□□□□ -0.13
HMGA1-204ENST00000401473 GNGT2O14610 69 aa14.23□□□□□ -0.13
HMGA1-204ENST00000401473 LRRTM2O43300 516 aa14.23□□□□□ -0.13
HMGA1-204ENST00000401473 IGF2P01344 180 aa14.23□□□□□ -0.13
HMGA1-204ENST00000401473 ASAH2BP0C7U1 165 aa14.23□□□□□ -0.13
HMGA1-204ENST00000401473 FASP25445 335 aa14.23□□□□□ -0.13
HMGA1-204ENST00000401473 GRPRP30550 384 aa14.23□□□□□ -0.13
HMGA1-204ENST00000401473 SRSF1Q07955 248 aaKnown RBP eCLIP14.23□□□□□ -0.13
HMGA1-204ENST00000401473 ATP6AP1Q15904 470 aa14.23□□□□□ -0.13
HMGA1-204ENST00000401473 ZNF770Q6IQ21 691 aaPredicted RBP14.23□□□□□ -0.13
HMGA1-204ENST00000401473 ZFP1Q6P2D0 407 aa14.23□□□□□ -0.13
HMGA1-204ENST00000401473 PAQR6Q6TCH4 344 aa14.23□□□□□ -0.13
HMGA1-204ENST00000401473 FJX1Q86VR8 437 aa14.23□□□□□ -0.13
HMGA1-204ENST00000401473 C10orf53Q8N6V4 93 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms