RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 C9orf50Q5SZB4 431 aa15.74■□□□□ 0.11
PTPRA-205ENST00000399903 MCATQ8IVS2 390 aaKnown RBP15.74■□□□□ 0.11
PTPRA-205ENST00000399903 MUC20Q8N307 709 aaPredicted RBP15.74■□□□□ 0.11
PTPRA-205ENST00000399903 ZNF614Q8N883 585 aa15.74■□□□□ 0.11
PTPRA-205ENST00000399903 FAM71CQ8NEG0 241 aa15.74■□□□□ 0.11
PTPRA-205ENST00000399903 S100A16Q96FQ6 103 aaKnown RBP15.74■□□□□ 0.11
PTPRA-205ENST00000399903 CAMK1GQ96NX5 476 aa15.74■□□□□ 0.11
PTPRA-205ENST00000399903 TREM1Q9NP99 234 aa15.74■□□□□ 0.11
PTPRA-205ENST00000399903 FBXL3Q9UKT7 428 aa15.74■□□□□ 0.11
PTPRA-205ENST00000399903 LTBP2Q14767 1821 aa15.74■□□□□ 0.11
PTPRA-205ENST00000399903 LOC100509620A0A075B734 347 aa15.74■□□□□ 0.11
PTPRA-205ENST00000399903 OR2M5A3KFT3 312 aa15.74■□□□□ 0.11
PTPRA-205ENST00000399903 OR6C68A6NDL8 312 aa15.74■□□□□ 0.11
PTPRA-205ENST00000399903 SPINT1O43278 529 aa15.74■□□□□ 0.11
PTPRA-205ENST00000399903 AKR7A3O95154 331 aa15.74■□□□□ 0.11
PTPRA-205ENST00000399903 CSN2P05814 226 aa15.74■□□□□ 0.11
PTPRA-205ENST00000399903 FABP1P07148 127 aa15.74■□□□□ 0.11
PTPRA-205ENST00000399903 TMIGD3P0DMS9 266 aaPredicted RBP15.74■□□□□ 0.11
PTPRA-205ENST00000399903 SHC2P98077 582 aa15.74■□□□□ 0.11
PTPRA-205ENST00000399903 CCDC157Q569K6 752 aa15.74■□□□□ 0.11
PTPRA-205ENST00000399903 UBE2NLQ5JXB2 153 aa15.74■□□□□ 0.11
PTPRA-205ENST00000399903 LDLRAD3Q86YD5 345 aa15.74■□□□□ 0.11
PTPRA-205ENST00000399903 OR13C2Q8NGS9 318 aa15.74■□□□□ 0.11
PTPRA-205ENST00000399903 EXO5Q9H790 373 aa15.74■□□□□ 0.11
PTPRA-205ENST00000399903 C14orf105Q9NVL8 296 aa15.74■□□□□ 0.11
PTPRA-205ENST00000399903 USP36Q9P275 1121 aaKnown RBP15.74■□□□□ 0.11
PTPRA-205ENST00000399903 NDRG3Q9UGV2 375 aa15.74■□□□□ 0.11
PTPRA-205ENST00000399903 ICKQ9UPZ9 632 aa15.74■□□□□ 0.11
PTPRA-205ENST00000399903 KCNAB3O43448 404 aa15.73■□□□□ 0.11
PTPRA-205ENST00000399903 PLPP2O43688 288 aa15.73■□□□□ 0.11
PTPRA-205ENST00000399903 SC5DO75845 299 aa15.73■□□□□ 0.11
PTPRA-205ENST00000399903 PBX2P40425 430 aa15.73■□□□□ 0.11
PTPRA-205ENST00000399903 PNLIPRP1P54315 467 aa15.73■□□□□ 0.11
PTPRA-205ENST00000399903 FUT5Q11128 374 aa15.73■□□□□ 0.11
PTPRA-205ENST00000399903 CBFBQ13951 182 aa15.73■□□□□ 0.11
PTPRA-205ENST00000399903 C17orf64Q86WR6 236 aa15.73■□□□□ 0.11
PTPRA-205ENST00000399903 SPICQ8N5J4 248 aa15.73■□□□□ 0.11
PTPRA-205ENST00000399903 CD180Q99467 661 aa15.73■□□□□ 0.11
PTPRA-205ENST00000399903 PBX4Q9BYU1 374 aa15.73■□□□□ 0.11
PTPRA-205ENST00000399903 COA4Q9NYJ1 87 aa15.73■□□□□ 0.11
PTPRA-205ENST00000399903 MAFFQ9ULX9 164 aa15.73■□□□□ 0.11
PTPRA-205ENST00000399903 RAB19A4D1S5 217 aa15.73■□□□□ 0.11
PTPRA-205ENST00000399903 ZNF705EA8MWA4 302 aaPredicted RBP15.73■□□□□ 0.11
PTPRA-205ENST00000399903 IDSB3KWA1 339 aa15.73■□□□□ 0.11
PTPRA-205ENST00000399903 ABCD4O14678 606 aa15.73■□□□□ 0.11
PTPRA-205ENST00000399903 CDK2P24941 298 aa15.73■□□□□ 0.11
PTPRA-205ENST00000399903 SNRPEP62304 92 aaKnown RBP15.73■□□□□ 0.11
PTPRA-205ENST00000399903 UNQ6126/PRO20091Q6UXV3 157 aa15.73■□□□□ 0.11
PTPRA-205ENST00000399903 RBMS3Q6XE24 437 aaKnown RBP15.73■□□□□ 0.11
PTPRA-205ENST00000399903 SPAG16Q8N0X2 631 aa15.73■□□□□ 0.11
PTPRA-205ENST00000399903 TRAM1L1Q8N609 369 aa15.73■□□□□ 0.11
PTPRA-205ENST00000399903 OR2AK2Q8NG84 335 aa15.73■□□□□ 0.11
PTPRA-205ENST00000399903 OR5AR1Q8NGP9 310 aa15.73■□□□□ 0.11
PTPRA-205ENST00000399903 AHCYL2Q96HN2 611 aaKnown RBP15.73■□□□□ 0.11
PTPRA-205ENST00000399903 PINK1Q9BXM7 581 aa15.73■□□□□ 0.11
PTPRA-205ENST00000399903 CHST6Q9GZX3 395 aa15.73■□□□□ 0.11
PTPRA-205ENST00000399903 C20orf141Q9NUB4 165 aa15.73■□□□□ 0.11
PTPRA-205ENST00000399903 MED9Q9NWA0 146 aa15.73■□□□□ 0.11
PTPRA-205ENST00000399903 PLEKHM1Q9Y4G2 1056 aa15.73■□□□□ 0.11
PTPRA-205ENST00000399903 KANTRA0A1W2PQU2 76 aa15.73■□□□□ 0.11
PTPRA-205ENST00000399903 SSX5O60225 188 aa15.73■□□□□ 0.11
PTPRA-205ENST00000399903 FARS2O95363 451 aaKnown RBP15.73■□□□□ 0.11
PTPRA-205ENST00000399903 C6P13671 934 aa15.73■□□□□ 0.11
PTPRA-205ENST00000399903 FPR3P25089 353 aa15.73■□□□□ 0.11
PTPRA-205ENST00000399903 UBXN2BQ14CS0 331 aa15.73■□□□□ 0.11
PTPRA-205ENST00000399903 B3GNTL1Q67FW5 361 aaPredicted RBP15.73■□□□□ 0.11
PTPRA-205ENST00000399903 DIO2Q92813 273 aa15.73■□□□□ 0.11
PTPRA-205ENST00000399903 FGF13Q92913 245 aa15.73■□□□□ 0.11
PTPRA-205ENST00000399903 PGLYRP3Q96LB9 341 aa15.73■□□□□ 0.11
PTPRA-205ENST00000399903 AMDHD1Q96NU7 426 aa15.73■□□□□ 0.11
PTPRA-205ENST00000399903 DEC1Q9P2X7 70 aa15.73■□□□□ 0.11
PTPRA-205ENST00000399903 UNC119BA6NIH7 251 aa15.72■□□□□ 0.11
PTPRA-205ENST00000399903 FAM171A2A8MVW0 826 aa15.72■□□□□ 0.11
PTPRA-205ENST00000399903 GABARAPH6UMI1 98 aa15.72■□□□□ 0.11
PTPRA-205ENST00000399903 CCSO14618 274 aa15.72■□□□□ 0.11
PTPRA-205ENST00000399903 PPP1R3DO95685 299 aa15.72■□□□□ 0.11
PTPRA-205ENST00000399903 PAK4O96013 591 aaPredicted RBP15.72■□□□□ 0.11
PTPRA-205ENST00000399903 SBK2P0C263 348 aa15.72■□□□□ 0.11
PTPRA-205ENST00000399903 P2RX1P51575 399 aa15.72■□□□□ 0.11
PTPRA-205ENST00000399903 THSD4Q6ZMP0 1018 aa15.72■□□□□ 0.11
PTPRA-205ENST00000399903 CMIPQ8IY22 773 aa15.72■□□□□ 0.11
PTPRA-205ENST00000399903 OR1S2Q8NGQ3 325 aa15.72■□□□□ 0.11
PTPRA-205ENST00000399903 UBE2E3Q969T4 207 aa15.72■□□□□ 0.11
PTPRA-205ENST00000399903 PNPLA2Q96AD5 504 aa15.72■□□□□ 0.11
PTPRA-205ENST00000399903 SLC19A3Q9BZV2 496 aa15.72■□□□□ 0.11
PTPRA-205ENST00000399903 SCN2AQ99250 2005 aa15.72■□□□□ 0.11
PTPRA-205ENST00000399903 NPIPA5A0A0B4J1W7 369 aa15.72■□□□□ 0.11
PTPRA-205ENST00000399903 A0A1B0GVT2 93 aa15.72■□□□□ 0.11
PTPRA-205ENST00000399903 LRIT2A6NDA9 550 aa15.72■□□□□ 0.11
PTPRA-205ENST00000399903 RIIAD1A6NNX1 92 aa15.72■□□□□ 0.11
PTPRA-205ENST00000399903 NPIPA7E9PJI5 369 aa15.72■□□□□ 0.11
PTPRA-205ENST00000399903 EIF3GO75821 320 aaKnown RBP eCLIP15.72■□□□□ 0.11
PTPRA-205ENST00000399903 ZGLP1P0C6A0 271 aa15.72■□□□□ 0.11
PTPRA-205ENST00000399903 NPIPA8P0DM63 369 aa15.72■□□□□ 0.11
PTPRA-205ENST00000399903 MC3RP41968 323 aa15.72■□□□□ 0.11
PTPRA-205ENST00000399903 NRG3P56975 720 aa15.72■□□□□ 0.11
PTPRA-205ENST00000399903 ZNF234Q14588 700 aa15.72■□□□□ 0.11
PTPRA-205ENST00000399903 NUDT13Q86X67 352 aa15.72■□□□□ 0.11
PTPRA-205ENST00000399903 FAM98AQ8NCA5 519 aaKnown RBP15.72■□□□□ 0.11
PTPRA-205ENST00000399903 OR4C6Q8NH72 309 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms