RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 MKRN2Q9H000 416 aaKnown RBP13.22□□□□□ -0.29
PCDHA11-201ENST00000398640 ACKR4Q9NPB9 350 aa13.22□□□□□ -0.29
PCDHA11-201ENST00000398640 B4DXG7 233 aa13.22□□□□□ -0.29
PCDHA11-201ENST00000398640 AGPAT2O15120 278 aa13.22□□□□□ -0.29
PCDHA11-201ENST00000398640 GALR3O60755 368 aaPredicted RBP13.22□□□□□ -0.29
PCDHA11-201ENST00000398640 MT-CO2P00403 227 aa13.22□□□□□ -0.29
PCDHA11-201ENST00000398640 DPP4P27487 766 aa13.22□□□□□ -0.29
PCDHA11-201ENST00000398640 EFNA3P52797 238 aa13.22□□□□□ -0.29
PCDHA11-201ENST00000398640 HES1Q14469 280 aa13.22□□□□□ -0.29
PCDHA11-201ENST00000398640 ZNF595Q8IYB9 648 aa13.22□□□□□ -0.29
PCDHA11-201ENST00000398640 OR1N1Q8NGS0 311 aa13.22□□□□□ -0.29
PCDHA11-201ENST00000398640 SP7Q8TDD2 431 aaPredicted RBP13.22□□□□□ -0.29
PCDHA11-201ENST00000398640 RSPRY1Q96DX4 576 aa13.22□□□□□ -0.29
PCDHA11-201ENST00000398640 SORT1Q99523 831 aa13.22□□□□□ -0.29
PCDHA11-201ENST00000398640 QRSL1Q9H0R6 528 aaKnown RBP13.22□□□□□ -0.29
PCDHA11-201ENST00000398640 ZNF696Q9H7X3 374 aa13.22□□□□□ -0.29
PCDHA11-201ENST00000398640 PLXNB2O15031 1838 aa13.22□□□□□ -0.29
PCDHA11-201ENST00000398640 PRKRAO75569 313 aaKnown RBP13.22□□□□□ -0.29
PCDHA11-201ENST00000398640 IFNA4P05014 189 aa13.22□□□□□ -0.29
PCDHA11-201ENST00000398640 SERPINA7P05543 415 aa13.22□□□□□ -0.29
PCDHA11-201ENST00000398640 CYB561P49447 251 aa13.22□□□□□ -0.29
PCDHA11-201ENST00000398640 GTPBP8Q8N3Z3 284 aaPredicted RBP13.22□□□□□ -0.29
PCDHA11-201ENST00000398640 METTL25Q8N6Q8 603 aa13.22□□□□□ -0.29
PCDHA11-201ENST00000398640 SCCPDHQ8NBX0 429 aa13.22□□□□□ -0.29
PCDHA11-201ENST00000398640 SNX18Q96RF0 628 aa13.22□□□□□ -0.29
PCDHA11-201ENST00000398640 C1QTNF6Q9BXI9 259 aa13.22□□□□□ -0.29
PCDHA11-201ENST00000398640 C1QTNF2Q9BXJ5 285 aa13.22□□□□□ -0.29
PCDHA11-201ENST00000398640 TSPAN10Q9H1Z9 355 aaPredicted RBP13.22□□□□□ -0.29
PCDHA11-201ENST00000398640 WIF1Q9Y5W5 379 aa13.22□□□□□ -0.29
PCDHA11-201ENST00000398640 ARPC5O15511 151 aa13.22□□□□□ -0.29
PCDHA11-201ENST00000398640 RPS17P08708 135 aaKnown RBP13.22□□□□□ -0.29
PCDHA11-201ENST00000398640 HLA-DMAP28067 261 aa13.22□□□□□ -0.29
PCDHA11-201ENST00000398640 OR52W1Q6IF63 320 aa13.22□□□□□ -0.29
PCDHA11-201ENST00000398640 ZNF322Q6U7Q0 402 aaPredicted RBP13.22□□□□□ -0.29
PCDHA11-201ENST00000398640 COX15Q7KZN9 410 aa13.22□□□□□ -0.29
PCDHA11-201ENST00000398640 MKXQ8IYA7 352 aa13.22□□□□□ -0.29
PCDHA11-201ENST00000398640 NT5C3BQ969T7 300 aa13.22□□□□□ -0.29
PCDHA11-201ENST00000398640 C7orf50Q9BRJ6 194 aaKnown RBP13.22□□□□□ -0.29
PCDHA11-201ENST00000398640 RPH3ALQ9UNE2 315 aa13.22□□□□□ -0.29
PCDHA11-201ENST00000398640 LRRC37AA6NMS7 1700 aa13.22□□□□□ -0.29
PCDHA11-201ENST00000398640 CEBPZOSA8MTT3 80 aa13.22□□□□□ -0.29
PCDHA11-201ENST00000398640 IFNA17P01571 189 aa13.22□□□□□ -0.29
PCDHA11-201ENST00000398640 IGHV3-9P01782 118 aa13.22□□□□□ -0.29
PCDHA11-201ENST00000398640 APEHP13798 732 aaKnown RBP13.22□□□□□ -0.29
PCDHA11-201ENST00000398640 ENPP1P22413 925 aa13.22□□□□□ -0.29
PCDHA11-201ENST00000398640 BDKRB2P30411 391 aa13.22□□□□□ -0.29
PCDHA11-201ENST00000398640 RPP30P78346 268 aaKnown RBP13.22□□□□□ -0.29
PCDHA11-201ENST00000398640 SF3A2Q15428 464 aaKnown RBP13.22□□□□□ -0.29
PCDHA11-201ENST00000398640 SLC22A10Q63ZE4 541 aa13.22□□□□□ -0.29
PCDHA11-201ENST00000398640 OR13J1Q8NGT2 312 aa13.22□□□□□ -0.29
PCDHA11-201ENST00000398640 CNOT9Q92600 299 aaKnown RBP13.22□□□□□ -0.29
PCDHA11-201ENST00000398640 ELOVL3Q9HB03 270 aa13.22□□□□□ -0.29
PCDHA11-201ENST00000398640 RGPD3A6NKT7 1758 aaPredicted RBP13.22□□□□□ -0.29
PCDHA11-201ENST00000398640 ALDOBP05062 364 aa13.21□□□□□ -0.29
PCDHA11-201ENST00000398640 RETP07949 1114 aa13.21□□□□□ -0.29
PCDHA11-201ENST00000398640 GPX3P22352 226 aa13.21□□□□□ -0.29
PCDHA11-201ENST00000398640 MRPL2Q5T653 305 aaKnown RBP13.21□□□□□ -0.29
PCDHA11-201ENST00000398640 GDF15Q99988 308 aa13.21□□□□□ -0.29
PCDHA11-201ENST00000398640 EGLN3Q9H6Z9 239 aa13.21□□□□□ -0.29
PCDHA11-201ENST00000398640 CASP8AP2Q9UKL3 1982 aa13.21□□□□□ -0.29
PCDHA11-201ENST00000398640 PIGBOS1A0A0B4J2F0 54 aa13.21□□□□□ -0.29
PCDHA11-201ENST00000398640 SC5DO75845 299 aa13.21□□□□□ -0.29
PCDHA11-201ENST00000398640 FGF4P08620 206 aa13.21□□□□□ -0.29
PCDHA11-201ENST00000398640 ADRA1AP35348 466 aa13.21□□□□□ -0.29
PCDHA11-201ENST00000398640 LGALS4P56470 323 aa13.21□□□□□ -0.29
PCDHA11-201ENST00000398640 RPS18P62269 152 aaKnown RBP13.21□□□□□ -0.29
PCDHA11-201ENST00000398640 GAB1Q13480 694 aa13.21□□□□□ -0.29
PCDHA11-201ENST00000398640 BCL7AQ4VC05 210 aa13.21□□□□□ -0.29
PCDHA11-201ENST00000398640 NDUFAF7Q7L592 441 aa13.21□□□□□ -0.29
PCDHA11-201ENST00000398640 SLC37A2Q8TED4 501 aa13.21□□□□□ -0.29
PCDHA11-201ENST00000398640 OR51E2Q9H255 320 aa13.21□□□□□ -0.29
PCDHA11-201ENST00000398640 FGF22Q9HCT0 170 aa13.21□□□□□ -0.29
PCDHA11-201ENST00000398640 DCAF13Q9NV06 445 aaKnown RBP13.21□□□□□ -0.29
PCDHA11-201ENST00000398640 NRXN2Q9P2S2 1712 aa13.21□□□□□ -0.29
PCDHA11-201ENST00000398640 F5H5P2 479 aa13.21□□□□□ -0.29
PCDHA11-201ENST00000398640 IGLV3-27P01718 113 aa13.21□□□□□ -0.29
PCDHA11-201ENST00000398640 GAAP10253 952 aa13.21□□□□□ -0.29
PCDHA11-201ENST00000398640 GPR85P60893 370 aa13.21□□□□□ -0.29
PCDHA11-201ENST00000398640 CLEC14AQ86T13 490 aa13.21□□□□□ -0.29
PCDHA11-201ENST00000398640 ZFAND2BQ8WV99 257 aa13.21□□□□□ -0.29
PCDHA11-201ENST00000398640 FAM122AQ96E09 287 aa13.21□□□□□ -0.29
PCDHA11-201ENST00000398640 NTMT1Q9BV86 223 aa13.21□□□□□ -0.29
PCDHA11-201ENST00000398640 PRDM9Q9NQV7 894 aa13.21□□□□□ -0.29
PCDHA11-201ENST00000398640 FAM53CQ9NYF3 392 aa13.21□□□□□ -0.29
PCDHA11-201ENST00000398640 FER1L6Q2WGJ9 1857 aa13.21□□□□□ -0.29
PCDHA11-201ENST00000398640 A0A1W2PQ09 198 aa13.21□□□□□ -0.3
PCDHA11-201ENST00000398640 TNFRSF10AO00220 468 aa13.21□□□□□ -0.3
PCDHA11-201ENST00000398640 CSO75390 466 aaKnown RBP13.21□□□□□ -0.3
PCDHA11-201ENST00000398640 GNB3P16520 340 aa13.21□□□□□ -0.3
PCDHA11-201ENST00000398640 SBSNQ6UWP8 590 aa13.21□□□□□ -0.3
PCDHA11-201ENST00000398640 TPRA1Q86W33 373 aa13.21□□□□□ -0.3
PCDHA11-201ENST00000398640 OR13C2Q8NGS9 318 aa13.21□□□□□ -0.3
PCDHA11-201ENST00000398640 KCNE4Q8WWG9 221 aa13.21□□□□□ -0.3
PCDHA11-201ENST00000398640 EPHX3Q9H6B9 360 aa13.21□□□□□ -0.3
PCDHA11-201ENST00000398640 TREX1Q9NSU2 369 aa13.21□□□□□ -0.3
PCDHA11-201ENST00000398640 WSB2Q9NYS7 404 aaPredicted RBP13.21□□□□□ -0.3
PCDHA11-201ENST00000398640 EVPLQ92817 2033 aa13.21□□□□□ -0.3
PCDHA11-201ENST00000398640 PRRG2O14669 202 aa13.21□□□□□ -0.3
PCDHA11-201ENST00000398640 IL2RGP31785 369 aa13.21□□□□□ -0.3
PCDHA11-201ENST00000398640 TAS2R20P59543 309 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms