RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 COQ8AQ8NI60 647 aa13.16□□□□□ -0.3
PCDHGA11-201ENST00000398587 MCTS1Q9ULC4 181 aaKnown RBP13.16□□□□□ -0.3
PCDHGA11-201ENST00000398587 TMED7Q9Y3B3 224 aa13.16□□□□□ -0.3
PCDHGA11-201ENST00000398587 A0A1W2PPC4 97 aa13.16□□□□□ -0.3
PCDHGA11-201ENST00000398587 BCDIN3DQ7Z5W3 292 aaKnown RBP13.16□□□□□ -0.3
PCDHGA11-201ENST00000398587 FBXL6Q8N531 539 aa13.16□□□□□ -0.3
PCDHGA11-201ENST00000398587 OR2T35Q8NGX2 323 aa13.16□□□□□ -0.3
PCDHGA11-201ENST00000398587 MFSD8Q8NHS3 518 aa13.16□□□□□ -0.3
PCDHGA11-201ENST00000398587 ULBP3Q9BZM4 244 aa13.16□□□□□ -0.3
PCDHGA11-201ENST00000398587 A6NLC8 198 aa13.16□□□□□ -0.3
PCDHGA11-201ENST00000398587 PIPP12273 146 aaPredicted RBP13.16□□□□□ -0.3
PCDHGA11-201ENST00000398587 ARSBP15848 533 aa13.16□□□□□ -0.3
PCDHGA11-201ENST00000398587 EEF1A1P68104 462 aaKnown RBP13.16□□□□□ -0.3
PCDHGA11-201ENST00000398587 SYT14P1Q58G82 188 aa13.16□□□□□ -0.3
PCDHGA11-201ENST00000398587 C6orf183Q5T699 404 aa13.16□□□□□ -0.3
PCDHGA11-201ENST00000398587 ABHD12BQ7Z5M8 362 aaPredicted RBP13.16□□□□□ -0.3
PCDHGA11-201ENST00000398587 ZNF700Q9H0M5 742 aa13.16□□□□□ -0.3
PCDHGA11-201ENST00000398587 UBQLN2Q9UHD9 624 aa13.16□□□□□ -0.3
PCDHGA11-201ENST00000398587 LINC01565O15544 149 aa13.16□□□□□ -0.3
PCDHGA11-201ENST00000398587 GNRHRP30968 328 aa13.16□□□□□ -0.3
PCDHGA11-201ENST00000398587 DEFA5Q01523 94 aa13.16□□□□□ -0.3
PCDHGA11-201ENST00000398587 CTU2Q2VPK5 515 aaKnown RBP13.16□□□□□ -0.3
PCDHGA11-201ENST00000398587 TMEM176BQ3YBM2 270 aaPredicted RBP13.16□□□□□ -0.3
PCDHGA11-201ENST00000398587 UBE2UQ5VVX9 321 aa13.16□□□□□ -0.3
PCDHGA11-201ENST00000398587 HBMQ6B0K9 141 aa13.16□□□□□ -0.3
PCDHGA11-201ENST00000398587 OR5J2Q8NH18 312 aa13.16□□□□□ -0.3
PCDHGA11-201ENST00000398587 CFHR5Q9BXR6 569 aa13.16□□□□□ -0.3
PCDHGA11-201ENST00000398587 CHST8Q9H2A9 424 aa13.16□□□□□ -0.3
PCDHGA11-201ENST00000398587 SPNS1Q9H2V7 528 aa13.16□□□□□ -0.3
PCDHGA11-201ENST00000398587 CEP290O15078 2479 aa13.15□□□□□ -0.3
PCDHGA11-201ENST00000398587 DOCK5Q9H7D0 1870 aa13.15□□□□□ -0.3
PCDHGA11-201ENST00000398587 CROCCQ5TZA2 2017 aa13.15□□□□□ -0.3
PCDHGA11-201ENST00000398587 NRXN2Q9P2S2 1712 aa13.15□□□□□ -0.3
PCDHGA11-201ENST00000398587 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.15□□□□□ -0.3
PCDHGA11-201ENST00000398587 A0A1B0GVG6 124 aa13.15□□□□□ -0.3
PCDHGA11-201ENST00000398587 ZNF749O43361 778 aa13.15□□□□□ -0.3
PCDHGA11-201ENST00000398587 IGHEP01854 428 aa13.15□□□□□ -0.3
PCDHGA11-201ENST00000398587 ZNF16P17020 682 aaPredicted RBP13.15□□□□□ -0.3
PCDHGA11-201ENST00000398587 ADPRMQ3LIE5 342 aa13.15□□□□□ -0.3
PCDHGA11-201ENST00000398587 AGAP6Q5VW22 663 aa13.15□□□□□ -0.3
PCDHGA11-201ENST00000398587 TMEM215Q68D42 235 aa13.15□□□□□ -0.3
PCDHGA11-201ENST00000398587 GIMAP5Q96F15 307 aa13.15□□□□□ -0.3
PCDHGA11-201ENST00000398587 AGAP4Q96P64 663 aa13.15□□□□□ -0.3
PCDHGA11-201ENST00000398587 GAREM1Q9H706 876 aa13.15□□□□□ -0.3
PCDHGA11-201ENST00000398587 NUP214P35658 2090 aaPredicted RBP13.15□□□□□ -0.3
PCDHGA11-201ENST00000398587 MEIOCA2RUB1 952 aa13.15□□□□□ -0.3
PCDHGA11-201ENST00000398587 CDHR4A6H8M9 788 aa13.15□□□□□ -0.3
PCDHGA11-201ENST00000398587 PCSK6P29122 969 aa13.15□□□□□ -0.3
PCDHGA11-201ENST00000398587 MTNR1BP49286 362 aa13.15□□□□□ -0.3
PCDHGA11-201ENST00000398587 SQSTM1Q13501 440 aa13.15□□□□□ -0.3
PCDHGA11-201ENST00000398587 P2RY14Q15391 338 aa13.15□□□□□ -0.3
PCDHGA11-201ENST00000398587 YOD1Q5VVQ6 348 aaPredicted RBP13.15□□□□□ -0.3
PCDHGA11-201ENST00000398587 CLEC1AQ8NC01 280 aa13.15□□□□□ -0.3
PCDHGA11-201ENST00000398587 ITFG2Q969R8 447 aa13.15□□□□□ -0.3
PCDHGA11-201ENST00000398587 ZNF707Q96C28 371 aaPredicted RBP13.15□□□□□ -0.3
PCDHGA11-201ENST00000398587 FOXN4Q96NZ1 517 aa13.15□□□□□ -0.3
PCDHGA11-201ENST00000398587 TREM1Q9NP99 234 aa13.15□□□□□ -0.3
PCDHGA11-201ENST00000398587 LOC105369274A0A096LPK9 316 aa13.15□□□□□ -0.3
PCDHGA11-201ENST00000398587 LOC102723532A0A0G2JNH3 316 aa13.15□□□□□ -0.3
PCDHGA11-201ENST00000398587 TRDV1A0A1B0GX56 115 aa13.15□□□□□ -0.3
PCDHGA11-201ENST00000398587 A6NIN4 97 aa13.15□□□□□ -0.3
PCDHGA11-201ENST00000398587 ZAR1LA6NP61 321 aa13.15□□□□□ -0.3
PCDHGA11-201ENST00000398587 CRTAPO75718 401 aaPredicted RBP13.15□□□□□ -0.3
PCDHGA11-201ENST00000398587 CAV3P56539 151 aa13.15□□□□□ -0.3
PCDHGA11-201ENST00000398587 DUSP8Q13202 625 aa13.15□□□□□ -0.3
PCDHGA11-201ENST00000398587 CALHM3Q86XJ0 350 aa13.15□□□□□ -0.3
PCDHGA11-201ENST00000398587 OR4N4Q8N0Y3 316 aa13.15□□□□□ -0.3
PCDHGA11-201ENST00000398587 FAM160A2Q8N612 972 aaPredicted RBP13.15□□□□□ -0.3
PCDHGA11-201ENST00000398587 SLC2A12Q8TD20 617 aa13.15□□□□□ -0.3
PCDHGA11-201ENST00000398587 ULBP2Q9BZM5 246 aa13.15□□□□□ -0.3
PCDHGA11-201ENST00000398587 CRISPLD2Q9H0B8 497 aa13.15□□□□□ -0.3
PCDHGA11-201ENST00000398587 OR10A2Q9H208 303 aa13.15□□□□□ -0.3
PCDHGA11-201ENST00000398587 BRWD3Q6RI45 1802 aa13.15□□□□□ -0.3
PCDHGA11-201ENST00000398587 TMEM129A0AVI4 362 aa13.14□□□□□ -0.31
PCDHGA11-201ENST00000398587 ZNF736B4DX44 427 aaPredicted RBP13.14□□□□□ -0.31
PCDHGA11-201ENST00000398587 EIF4E2O60573 245 aaKnown RBP13.14□□□□□ -0.31
PCDHGA11-201ENST00000398587 FCMRO60667 390 aa13.14□□□□□ -0.31
PCDHGA11-201ENST00000398587 CHRM4P08173 479 aa13.14□□□□□ -0.31
PCDHGA11-201ENST00000398587 POU3F2P20265 443 aaPredicted RBP13.14□□□□□ -0.31
PCDHGA11-201ENST00000398587 GDF1P27539 372 aa13.14□□□□□ -0.31
PCDHGA11-201ENST00000398587 AIMP2Q13155 320 aaKnown RBP13.14□□□□□ -0.31
PCDHGA11-201ENST00000398587 KIAA0040Q15053 153 aa13.14□□□□□ -0.31
PCDHGA11-201ENST00000398587 CHPT1Q8WUD6 406 aa13.14□□□□□ -0.31
PCDHGA11-201ENST00000398587 CLEC2DQ9UHP7 191 aa13.14□□□□□ -0.31
PCDHGA11-201ENST00000398587 TMEM212A6NML5 194 aa13.14□□□□□ -0.31
PCDHGA11-201ENST00000398587 A8MVM7 634 aa13.14□□□□□ -0.31
PCDHGA11-201ENST00000398587 ZNF593O00488 134 aaPredicted RBP13.14□□□□□ -0.31
PCDHGA11-201ENST00000398587 OR7A10O76100 309 aa13.14□□□□□ -0.31
PCDHGA11-201ENST00000398587 HTR3BO95264 441 aa13.14□□□□□ -0.31
PCDHGA11-201ENST00000398587 AKR1C4P17516 323 aa13.14□□□□□ -0.31
PCDHGA11-201ENST00000398587 CD34P28906 385 aa13.14□□□□□ -0.31
PCDHGA11-201ENST00000398587 MAN2A2P49641 1150 aa13.14□□□□□ -0.31
PCDHGA11-201ENST00000398587 NKX2-5P52952 324 aaPredicted RBP13.14□□□□□ -0.31
PCDHGA11-201ENST00000398587 COL28A1Q2UY09 1125 aa13.14□□□□□ -0.31
PCDHGA11-201ENST00000398587 DCAF12Q5T6F0 453 aa13.14□□□□□ -0.31
PCDHGA11-201ENST00000398587 SSX6Q7RTT6 188 aa13.14□□□□□ -0.31
PCDHGA11-201ENST00000398587 DPY19L4Q7Z388 723 aa13.14□□□□□ -0.31
PCDHGA11-201ENST00000398587 KLHDC8BQ8IXV7 354 aa13.14□□□□□ -0.31
PCDHGA11-201ENST00000398587 ZNF454Q8N9F8 522 aa13.14□□□□□ -0.31
PCDHGA11-201ENST00000398587 ABHD4Q8TB40 342 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms