RNA–Protein interactions for RNA: ENST00000398317.2

NIFKP1-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 1, humanhuman

BASIC

Gene NIFKP1, Length 889 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP1-201ENST00000398317 SYPL1Q16563 259 aa8.6□□□□□ -1.03
NIFKP1-201ENST00000398317 NRF1Q16656 503 aa8.6□□□□□ -1.03
NIFKP1-201ENST00000398317 KLHL17Q6TDP4 642 aa8.6□□□□□ -1.03
NIFKP1-201ENST00000398317 CLEC2AQ6UVW9 174 aa8.6□□□□□ -1.03
NIFKP1-201ENST00000398317 CASP12Q6UXS9 341 aa8.6□□□□□ -1.03
NIFKP1-201ENST00000398317 SSX8Q7RTT4 187 aa8.6□□□□□ -1.03
NIFKP1-201ENST00000398317 RNF130Q86XS8 419 aa8.6□□□□□ -1.03
NIFKP1-201ENST00000398317 FBXL14Q8N1E6 418 aa8.6□□□□□ -1.03
NIFKP1-201ENST00000398317 MUC15Q8N387 334 aa8.6□□□□□ -1.03
NIFKP1-201ENST00000398317 ZNF525Q8N782 197 aa8.6□□□□□ -1.03
NIFKP1-201ENST00000398317 ANKFN1Q8N957 763 aa8.6□□□□□ -1.03
NIFKP1-201ENST00000398317 WDR31Q8NA23 367 aa8.6□□□□□ -1.03
NIFKP1-201ENST00000398317 OR10H5Q8NGA6 315 aa8.6□□□□□ -1.03
NIFKP1-201ENST00000398317 ZBTB9Q96C00 473 aa8.6□□□□□ -1.03
NIFKP1-201ENST00000398317 NEURL3Q96EH8 262 aa8.6□□□□□ -1.03
NIFKP1-201ENST00000398317 RADILQ96JH8 1075 aa8.6□□□□□ -1.03
NIFKP1-201ENST00000398317 TEX37Q96LM6 180 aa8.6□□□□□ -1.03
NIFKP1-201ENST00000398317 MUS81Q96NY9 551 aa8.6□□□□□ -1.03
NIFKP1-201ENST00000398317 ZIM3Q96PE6 472 aa8.6□□□□□ -1.03
NIFKP1-201ENST00000398317 NUF2Q9BZD4 464 aa8.6□□□□□ -1.03
NIFKP1-201ENST00000398317 POLE3Q9NRF9 147 aa8.6□□□□□ -1.03
NIFKP1-201ENST00000398317 TAS2R16Q9NYV7 291 aa8.6□□□□□ -1.03
NIFKP1-201ENST00000398317 TMEM181Q9P2C4 612 aa8.6□□□□□ -1.03
NIFKP1-201ENST00000398317 UPB1Q9UBR1 384 aa8.6□□□□□ -1.03
NIFKP1-201ENST00000398317 TMED7Q9Y3B3 224 aa8.6□□□□□ -1.03
NIFKP1-201ENST00000398317 ATP23Q9Y6H3 246 aa8.6□□□□□ -1.03
NIFKP1-201ENST00000398317 ZC3H12DA2A288 527 aaKnown RBP8.59□□□□□ -1.03
NIFKP1-201ENST00000398317 PDLIM1O00151 329 aa8.59□□□□□ -1.03
NIFKP1-201ENST00000398317 CHRM4P08173 479 aa8.59□□□□□ -1.03
NIFKP1-201ENST00000398317 GUSBP08236 651 aa8.59□□□□□ -1.03
NIFKP1-201ENST00000398317 MYZAPP0CAP1 466 aa8.59□□□□□ -1.03
NIFKP1-201ENST00000398317 BGNP21810 368 aa8.59□□□□□ -1.03
NIFKP1-201ENST00000398317 S100A3P33764 101 aa8.59□□□□□ -1.03
NIFKP1-201ENST00000398317 SLC1A6P48664 564 aa8.59□□□□□ -1.03
NIFKP1-201ENST00000398317 CLK1P49759 484 aaKnown RBP8.59□□□□□ -1.03
NIFKP1-201ENST00000398317 RPL14P50914 215 aaKnown RBP8.59□□□□□ -1.03
NIFKP1-201ENST00000398317 SLC35A1P78382 337 aa8.59□□□□□ -1.03
NIFKP1-201ENST00000398317 HPCAP84074 193 aa8.59□□□□□ -1.03
NIFKP1-201ENST00000398317 H3F3AP84243 136 aa8.59□□□□□ -1.03
NIFKP1-201ENST00000398317 SLC25A3Q00325 362 aa8.59□□□□□ -1.03
NIFKP1-201ENST00000398317 RAB35Q15286 201 aa8.59□□□□□ -1.03
NIFKP1-201ENST00000398317 TMEM249Q2WGJ8 235 aa8.59□□□□□ -1.03
NIFKP1-201ENST00000398317 FAM174BQ3ZCQ3 159 aa8.59□□□□□ -1.03
NIFKP1-201ENST00000398317 CHRFAM7AQ494W8 412 aa8.59□□□□□ -1.03
NIFKP1-201ENST00000398317 AP1ARQ63HQ0 302 aa8.59□□□□□ -1.03
NIFKP1-201ENST00000398317 PODNL1Q6PEZ8 512 aa8.59□□□□□ -1.03
NIFKP1-201ENST00000398317 PHC2Q8IXK0 858 aa8.59□□□□□ -1.03
NIFKP1-201ENST00000398317 VPS37AQ8NEZ2 397 aa8.59□□□□□ -1.03
NIFKP1-201ENST00000398317 AENQ8WTP8 325 aaKnown RBP8.59□□□□□ -1.03
NIFKP1-201ENST00000398317 TESCQ96BS2 214 aa8.59□□□□□ -1.03
NIFKP1-201ENST00000398317 SORT1Q99523 831 aa8.59□□□□□ -1.03
NIFKP1-201ENST00000398317 INPP5KQ9BT40 448 aa8.59□□□□□ -1.03
NIFKP1-201ENST00000398317 SLC38A1Q9H2H9 487 aa8.59□□□□□ -1.03
NIFKP1-201ENST00000398317 MANSC1Q9H8J5 431 aa8.59□□□□□ -1.03
NIFKP1-201ENST00000398317 EXOSC3Q9NQT5 275 aaKnown RBP8.59□□□□□ -1.03
NIFKP1-201ENST00000398317 SLC7A10Q9NS82 523 aa8.59□□□□□ -1.03
NIFKP1-201ENST00000398317 PNPOQ9NVS9 261 aa8.59□□□□□ -1.03
NIFKP1-201ENST00000398317 MALT1Q9UDY8 824 aa8.59□□□□□ -1.03
NIFKP1-201ENST00000398317 OSGIN1Q9UJX0 560 aa8.59□□□□□ -1.03
NIFKP1-201ENST00000398317 TRAPPC4Q9Y296 219 aa8.59□□□□□ -1.03
NIFKP1-201ENST00000398317 RAP2CQ9Y3L5 183 aa8.59□□□□□ -1.03
NIFKP1-201ENST00000398317 FLVCR1Q9Y5Y0 555 aa8.59□□□□□ -1.03
NIFKP1-201ENST00000398317 CCDC154A6NI56 674 aa8.58□□□□□ -1.04
NIFKP1-201ENST00000398317 E9PBE3 544 aa8.58□□□□□ -1.04
NIFKP1-201ENST00000398317 DNPH1O43598 174 aa8.58□□□□□ -1.04
NIFKP1-201ENST00000398317 LY6HO94772 140 aa8.58□□□□□ -1.04
NIFKP1-201ENST00000398317 IFNA2P01563 188 aa8.58□□□□□ -1.04
NIFKP1-201ENST00000398317 GSNP06396 782 aa8.58□□□□□ -1.04
NIFKP1-201ENST00000398317 ALDOCP09972 364 aaKnown RBP8.58□□□□□ -1.04
NIFKP1-201ENST00000398317 LBPP18428 481 aa8.58□□□□□ -1.04
NIFKP1-201ENST00000398317 CDH2P19022 906 aaPredicted RBP8.58□□□□□ -1.04
NIFKP1-201ENST00000398317 FKBP2P26885 142 aaKnown RBP8.58□□□□□ -1.04
NIFKP1-201ENST00000398317 TACR3P29371 465 aa8.58□□□□□ -1.04
NIFKP1-201ENST00000398317 IL12AP29459 219 aa8.58□□□□□ -1.04
NIFKP1-201ENST00000398317 CDKN2CP42773 168 aa8.58□□□□□ -1.04
NIFKP1-201ENST00000398317 POLR2HP52434 150 aaKnown RBP8.58□□□□□ -1.04
NIFKP1-201ENST00000398317 CLNS1AP54105 237 aaKnown RBP8.58□□□□□ -1.04
NIFKP1-201ENST00000398317 UFM1P61960 85 aa8.58□□□□□ -1.04
NIFKP1-201ENST00000398317 CDK5R2Q13319 367 aa8.58□□□□□ -1.04
NIFKP1-201ENST00000398317 SLC17A1Q14916 467 aa8.58□□□□□ -1.04
NIFKP1-201ENST00000398317 KRT71Q3SY84 523 aa8.58□□□□□ -1.04
NIFKP1-201ENST00000398317 C6orf52Q5T4I8 152 aa8.58□□□□□ -1.04
NIFKP1-201ENST00000398317 TSPO2Q5TGU0 170 aa8.58□□□□□ -1.04
NIFKP1-201ENST00000398317 OR7E24Q6IFN5 339 aa8.58□□□□□ -1.04
NIFKP1-201ENST00000398317 ZNF621Q6ZSS3 439 aa8.58□□□□□ -1.04
NIFKP1-201ENST00000398317 TMEM99Q8N816 258 aa8.58□□□□□ -1.04
NIFKP1-201ENST00000398317 PNPT1Q8TCS8 783 aaKnown RBP8.58□□□□□ -1.04
NIFKP1-201ENST00000398317 WDR60Q8WVS4 1066 aa8.58□□□□□ -1.04
NIFKP1-201ENST00000398317 OIT3Q8WWZ8 545 aa8.58□□□□□ -1.04
NIFKP1-201ENST00000398317 DDIT4LQ96D03 193 aa8.58□□□□□ -1.04
NIFKP1-201ENST00000398317 TRIM44Q96DX7 344 aaPredicted RBP8.58□□□□□ -1.04
NIFKP1-201ENST00000398317 CCDC115Q96NT0 180 aa8.58□□□□□ -1.04
NIFKP1-201ENST00000398317 TRNT1Q96Q11 434 aaKnown RBP8.58□□□□□ -1.04
NIFKP1-201ENST00000398317 TNFRSF13CQ96RJ3 184 aa8.58□□□□□ -1.04
NIFKP1-201ENST00000398317 NAA11Q9BSU3 229 aaPredicted RBP8.58□□□□□ -1.04
NIFKP1-201ENST00000398317 SLC17A5Q9NRA2 495 aa8.58□□□□□ -1.04
NIFKP1-201ENST00000398317 BTNL2Q9UIR0 455 aa8.58□□□□□ -1.04
NIFKP1-201ENST00000398317 SLC9A8Q9Y2E8 581 aa8.58□□□□□ -1.04
NIFKP1-201ENST00000398317 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.58□□□□□ -1.04
NIFKP1-201ENST00000398317 CFAP73A6NFT4 308 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms