RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 TEP1Q99973 2627 aaKnown RBP22.71■■□□□ 1.23
U2AF1-203ENST00000398137 SULT2B1O00204 365 aa22.71■■□□□ 1.23
U2AF1-203ENST00000398137 FFAR1O14842 300 aa22.71■■□□□ 1.23
U2AF1-203ENST00000398137 DIRAS1O95057 198 aa22.71■■□□□ 1.23
U2AF1-203ENST00000398137 AHSA1O95433 338 aa22.71■■□□□ 1.23
U2AF1-203ENST00000398137 SYNGR4O95473 234 aa22.71■■□□□ 1.23
U2AF1-203ENST00000398137 TGM6O95932 706 aa22.71■■□□□ 1.23
U2AF1-203ENST00000398137 IMPDH2P12268 514 aa22.71■■□□□ 1.23
U2AF1-203ENST00000398137 IDUAP35475 653 aa22.71■■□□□ 1.23
U2AF1-203ENST00000398137 TESK1Q15569 626 aa22.71■■□□□ 1.23
U2AF1-203ENST00000398137 ZNF239Q16600 458 aaKnown RBP22.71■■□□□ 1.23
U2AF1-203ENST00000398137 P4HA3Q7Z4N8 544 aa22.71■■□□□ 1.23
U2AF1-203ENST00000398137 C9orf106Q8NAJ2 232 aa22.71■■□□□ 1.23
U2AF1-203ENST00000398137 UTP4Q969X6 686 aaKnown RBP22.71■■□□□ 1.23
U2AF1-203ENST00000398137 ZNF300Q96RE9 604 aaPredicted RBP22.71■■□□□ 1.23
U2AF1-203ENST00000398137 UCN2Q96RP3 112 aa22.71■■□□□ 1.23
U2AF1-203ENST00000398137 FNDC11Q9BVV2 318 aa22.71■■□□□ 1.23
U2AF1-203ENST00000398137 POTEKPQ9BYX7 375 aa22.71■■□□□ 1.23
U2AF1-203ENST00000398137 TIGARQ9NQ88 270 aa22.71■■□□□ 1.23
U2AF1-203ENST00000398137 MCTS1Q9ULC4 181 aaKnown RBP22.71■■□□□ 1.23
U2AF1-203ENST00000398137 FAM32AQ9Y421 112 aaKnown RBP22.71■■□□□ 1.23
U2AF1-203ENST00000398137 ZNF175Q9Y473 711 aa22.71■■□□□ 1.23
U2AF1-203ENST00000398137 MBD3L4A6NDZ8 208 aaPredicted RBP22.7■■□□□ 1.22
U2AF1-203ENST00000398137 MBD3L3A6NE82 208 aaPredicted RBP22.7■■□□□ 1.22
U2AF1-203ENST00000398137 MBD3L5A6NJ08 208 aaPredicted RBP22.7■■□□□ 1.22
U2AF1-203ENST00000398137 AQP12BA6NM10 295 aa22.7■■□□□ 1.22
U2AF1-203ENST00000398137 NPIPB7O75200 414 aa22.7■■□□□ 1.22
U2AF1-203ENST00000398137 PMS2P2O95744 297 aa22.7■■□□□ 1.22
U2AF1-203ENST00000398137 MT-ND1P03886 318 aa22.7■■□□□ 1.22
U2AF1-203ENST00000398137 FABP3P05413 133 aa22.7■■□□□ 1.22
U2AF1-203ENST00000398137 KLK2P20151 261 aa22.7■■□□□ 1.22
U2AF1-203ENST00000398137 BMP5P22003 454 aa22.7■■□□□ 1.22
U2AF1-203ENST00000398137 FUT4P22083 530 aa22.7■■□□□ 1.22
U2AF1-203ENST00000398137 IFNA8P32881 189 aa22.7■■□□□ 1.22
U2AF1-203ENST00000398137 OR2B6P58173 313 aa22.7■■□□□ 1.22
U2AF1-203ENST00000398137 CSNK2A1P68400 391 aaPredicted RBP22.7■■□□□ 1.22
U2AF1-203ENST00000398137 C1orf146Q5VVC0 180 aa22.7■■□□□ 1.22
U2AF1-203ENST00000398137 LINC00114Q6XXX2 140 aa22.7■■□□□ 1.22
U2AF1-203ENST00000398137 SPATA24Q86W54 205 aa22.7■■□□□ 1.22
U2AF1-203ENST00000398137 AQP12AQ8IXF9 295 aa22.7■■□□□ 1.22
U2AF1-203ENST00000398137 OFCC1Q8IZS5 231 aa22.7■■□□□ 1.22
U2AF1-203ENST00000398137 MBD3L2Q8NHZ7 208 aaPredicted RBP22.7■■□□□ 1.22
U2AF1-203ENST00000398137 WNT2BQ93097 391 aa22.7■■□□□ 1.22
U2AF1-203ENST00000398137 CPNE4Q96A23 557 aaPredicted RBP22.7■■□□□ 1.22
U2AF1-203ENST00000398137 KTI12Q96EK9 354 aaPredicted RBP22.7■■□□□ 1.22
U2AF1-203ENST00000398137 MPP4Q96JB8 637 aa22.7■■□□□ 1.22
U2AF1-203ENST00000398137 PRSS27Q9BQR3 290 aa22.7■■□□□ 1.22
U2AF1-203ENST00000398137 ANKRD17O75179 2603 aaKnown RBP22.7■■□□□ 1.22
U2AF1-203ENST00000398137 IGHV3-15A0A0B4J1V0 119 aa22.69■■□□□ 1.22
U2AF1-203ENST00000398137 AQP8O94778 261 aa22.69■■□□□ 1.22
U2AF1-203ENST00000398137 PRSS23O95084 383 aa22.69■■□□□ 1.22
U2AF1-203ENST00000398137 RPS5P46782 204 aaKnown RBP22.69■■□□□ 1.22
U2AF1-203ENST00000398137 RAC3P60763 192 aa22.69■■□□□ 1.22
U2AF1-203ENST00000398137 ST3GAL3Q11203 375 aa22.69■■□□□ 1.22
U2AF1-203ENST00000398137 IQCCQ4KMZ1 466 aa22.69■■□□□ 1.22
U2AF1-203ENST00000398137 YTHDF3Q7Z739 585 aaKnown RBP22.69■■□□□ 1.22
U2AF1-203ENST00000398137 CDH24Q86UP0 819 aa22.69■■□□□ 1.22
U2AF1-203ENST00000398137 ZDHHC21Q8IVQ6 265 aa22.69■■□□□ 1.22
U2AF1-203ENST00000398137 NKAIN4Q8IVV8 208 aa22.69■■□□□ 1.22
U2AF1-203ENST00000398137 TMEM255BQ8WV15 326 aa22.69■■□□□ 1.22
U2AF1-203ENST00000398137 ROBO4Q8WZ75 1007 aa22.69■■□□□ 1.22
U2AF1-203ENST00000398137 TMEM43Q9BTV4 400 aa22.69■■□□□ 1.22
U2AF1-203ENST00000398137 PTDSS2Q9BVG9 487 aa22.69■■□□□ 1.22
U2AF1-203ENST00000398137 PRRG4Q9BZD6 226 aa22.69■■□□□ 1.22
U2AF1-203ENST00000398137 MAGIXQ9H6Y5 334 aa22.69■■□□□ 1.22
U2AF1-203ENST00000398137 ITGB1BP2Q9UKP3 347 aa22.69■■□□□ 1.22
U2AF1-203ENST00000398137 MPDZO75970 2070 aa22.69■■□□□ 1.22
U2AF1-203ENST00000398137 LIPT2A6NK58 231 aa22.68■■□□□ 1.22
U2AF1-203ENST00000398137 KPNA4O00629 521 aaPredicted RBP22.68■■□□□ 1.22
U2AF1-203ENST00000398137 CIB2O75838 187 aa22.68■■□□□ 1.22
U2AF1-203ENST00000398137 THRBP10828 461 aa22.68■■□□□ 1.22
U2AF1-203ENST00000398137 FCGR2AP12318 317 aa22.68■■□□□ 1.22
U2AF1-203ENST00000398137 ITGA2P17301 1181 aa22.68■■□□□ 1.22
U2AF1-203ENST00000398137 RHCEP18577 417 aa22.68■■□□□ 1.22
U2AF1-203ENST00000398137 OR7A5Q15622 319 aa22.68■■□□□ 1.22
U2AF1-203ENST00000398137 FBXL19-AS1Q494R0 122 aa22.68■■□□□ 1.22
U2AF1-203ENST00000398137 FAM98BQ52LJ0 330 aaKnown RBP22.68■■□□□ 1.22
U2AF1-203ENST00000398137 TTC33Q6PID6 262 aaPredicted RBP22.68■■□□□ 1.22
U2AF1-203ENST00000398137 C5orf46Q6UWT4 87 aa22.68■■□□□ 1.22
U2AF1-203ENST00000398137 ADGRG5Q8IZF4 528 aa22.68■■□□□ 1.22
U2AF1-203ENST00000398137 PIP5K1AQ99755 562 aa22.68■■□□□ 1.22
U2AF1-203ENST00000398137 TM9SF2Q99805 663 aa22.68■■□□□ 1.22
U2AF1-203ENST00000398137 ZNF426Q9BUY5 554 aa22.68■■□□□ 1.22
U2AF1-203ENST00000398137 IL1RAPQ9NPH3 570 aa22.68■■□□□ 1.22
U2AF1-203ENST00000398137 MAN2C1Q9NTJ4 1040 aa22.68■■□□□ 1.22
U2AF1-203ENST00000398137 ZNF629Q9UEG4 869 aaPredicted RBP22.68■■□□□ 1.22
U2AF1-203ENST00000398137 AURKCQ9UQB9 309 aa22.68■■□□□ 1.22
U2AF1-203ENST00000398137 TRAPPC4Q9Y296 219 aa22.68■■□□□ 1.22
U2AF1-203ENST00000398137 F8P00451 2351 aa22.68■■□□□ 1.22
U2AF1-203ENST00000398137 MED12LQ86YW9 2145 aa22.67■■□□□ 1.22
U2AF1-203ENST00000398137 SPG11Q96JI7 2443 aa22.67■■□□□ 1.22
U2AF1-203ENST00000398137 TRAV36DV7A0A075B6V5 113 aa22.67■■□□□ 1.22
U2AF1-203ENST00000398137 DHRS12A0PJE2 317 aa22.67■■□□□ 1.22
U2AF1-203ENST00000398137 SMAD9O15198 467 aaKnown RBP22.67■■□□□ 1.22
U2AF1-203ENST00000398137 FPR1P21462 350 aa22.67■■□□□ 1.22
U2AF1-203ENST00000398137 ENPP1P22413 925 aa22.67■■□□□ 1.22
U2AF1-203ENST00000398137 SLC35A1P78382 337 aa22.67■■□□□ 1.22
U2AF1-203ENST00000398137 CHRNB3Q05901 458 aa22.67■■□□□ 1.22
U2AF1-203ENST00000398137 ZSCAN26Q16670 478 aa22.67■■□□□ 1.22
U2AF1-203ENST00000398137 GCNT2Q8N0V5 402 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms