RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 TRAM1Q15629 374 aa12.78□□□□□ -0.36
NUP98-204ENST00000397004 UBE2NLQ5JXB2 153 aa12.78□□□□□ -0.36
NUP98-204ENST00000397004 SLC22A10Q63ZE4 541 aa12.78□□□□□ -0.36
NUP98-204ENST00000397004 SFTPA2Q8IWL1 248 aa12.78□□□□□ -0.36
NUP98-204ENST00000397004 OR4D10Q8NGI6 311 aa12.78□□□□□ -0.36
NUP98-204ENST00000397004 SPPL3Q8TCT6 385 aa12.78□□□□□ -0.36
NUP98-204ENST00000397004 THEM6Q8WUY1 208 aa12.78□□□□□ -0.36
NUP98-204ENST00000397004 LYARQ9NX58 379 aaKnown RBP12.78□□□□□ -0.36
NUP98-204ENST00000397004 SLC17A4Q9Y2C5 497 aa12.78□□□□□ -0.36
NUP98-204ENST00000397004 KLHDC2Q9Y2U9 406 aa12.78□□□□□ -0.36
NUP98-204ENST00000397004 FKBP7Q9Y680 259 aa12.78□□□□□ -0.36
NUP98-204ENST00000397004 HRKO00198 91 aa12.77□□□□□ -0.36
NUP98-204ENST00000397004 FOXS1O43638 330 aa12.77□□□□□ -0.36
NUP98-204ENST00000397004 SIX6O95475 246 aa12.77□□□□□ -0.36
NUP98-204ENST00000397004 NMBP08949 121 aa12.77□□□□□ -0.36
NUP98-204ENST00000397004 LAMP2P13473 410 aa12.77□□□□□ -0.36
NUP98-204ENST00000397004 IGFALSP35858 605 aa12.77□□□□□ -0.36
NUP98-204ENST00000397004 TSFMP43897 325 aaKnown RBP12.77□□□□□ -0.36
NUP98-204ENST00000397004 TAS2R43P59537 309 aa12.77□□□□□ -0.36
NUP98-204ENST00000397004 DHODHQ02127 395 aa12.77□□□□□ -0.36
NUP98-204ENST00000397004 SLC25A25Q6KCM7 469 aa12.77□□□□□ -0.36
NUP98-204ENST00000397004 RGS7BPQ6MZT1 257 aaPredicted RBP12.77□□□□□ -0.36
NUP98-204ENST00000397004 PWWP2BQ6NUJ5 590 aa12.77□□□□□ -0.36
NUP98-204ENST00000397004 USP53Q70EK8 1073 aa12.77□□□□□ -0.36
NUP98-204ENST00000397004 GRAMD2AQ8IUY3 354 aa12.77□□□□□ -0.36
NUP98-204ENST00000397004 ZBTB44Q8NCP5 570 aa12.77□□□□□ -0.36
NUP98-204ENST00000397004 RPS4Y2Q8TD47 263 aa12.77□□□□□ -0.36
NUP98-204ENST00000397004 GAL3ST3Q96A11 431 aa12.77□□□□□ -0.36
NUP98-204ENST00000397004 SPRTNQ9H040 489 aaPredicted RBP12.77□□□□□ -0.36
NUP98-204ENST00000397004 NCDNQ9UBB6 729 aa12.77□□□□□ -0.36
NUP98-204ENST00000397004 ING1Q9UK53 422 aaPredicted RBP12.77□□□□□ -0.36
NUP98-204ENST00000397004 FOXJ3Q9UPW0 622 aa12.77□□□□□ -0.36
NUP98-204ENST00000397004 MPDZO75970 2070 aa12.77□□□□□ -0.36
NUP98-204ENST00000397004 BRINP1O60477 761 aa12.77□□□□□ -0.37
NUP98-204ENST00000397004 MAT2AP31153 395 aaKnown RBP12.77□□□□□ -0.37
NUP98-204ENST00000397004 HTRA4P83105 476 aaPredicted RBP12.77□□□□□ -0.37
NUP98-204ENST00000397004 TAGLNQ01995 201 aaKnown RBP12.77□□□□□ -0.37
NUP98-204ENST00000397004 KRT33BQ14525 404 aa12.77□□□□□ -0.37
NUP98-204ENST00000397004 PRICKLE4Q2TBC4 344 aa12.77□□□□□ -0.37
NUP98-204ENST00000397004 ZNF684Q5T5D7 378 aa12.77□□□□□ -0.37
NUP98-204ENST00000397004 OVCH1Q7RTY7 1134 aa12.77□□□□□ -0.37
NUP98-204ENST00000397004 UBE2Q1Q7Z7E8 422 aa12.77□□□□□ -0.37
NUP98-204ENST00000397004 NPEPL1Q8NDH3 523 aa12.77□□□□□ -0.37
NUP98-204ENST00000397004 SP7Q8TDD2 431 aaPredicted RBP12.77□□□□□ -0.37
NUP98-204ENST00000397004 NKX3-1Q99801 234 aaPredicted RBP12.77□□□□□ -0.37
NUP98-204ENST00000397004 ARPC5LQ9BPX5 153 aa12.77□□□□□ -0.37
NUP98-204ENST00000397004 RDH8Q9NYR8 311 aa12.77□□□□□ -0.37
NUP98-204ENST00000397004 HCN3Q9P1Z3 774 aa12.77□□□□□ -0.37
NUP98-204ENST00000397004 DTX4Q9Y2E6 619 aa12.77□□□□□ -0.37
NUP98-204ENST00000397004 IER3IP1Q9Y5U9 82 aa12.77□□□□□ -0.37
NUP98-204ENST00000397004 LRRC72A6NJI9 287 aa12.77□□□□□ -0.37
NUP98-204ENST00000397004 LPLP06858 475 aa12.77□□□□□ -0.37
NUP98-204ENST00000397004 DBIP07108 87 aaKnown RBP12.77□□□□□ -0.37
NUP98-204ENST00000397004 ZNF3P17036 446 aa12.77□□□□□ -0.37
NUP98-204ENST00000397004 LINC00114Q6XXX2 140 aa12.77□□□□□ -0.37
NUP98-204ENST00000397004 GLDNQ6ZMI3 551 aaPredicted RBP12.77□□□□□ -0.37
NUP98-204ENST00000397004 STK35Q8TDR2 534 aa12.77□□□□□ -0.37
NUP98-204ENST00000397004 SUSD6Q92537 303 aa12.77□□□□□ -0.37
NUP98-204ENST00000397004 ELMOD3Q96FG2 381 aa12.77□□□□□ -0.37
NUP98-204ENST00000397004 TSSK2Q96PF2 358 aa12.77□□□□□ -0.37
NUP98-204ENST00000397004 CAPN10Q9HC96 672 aa12.77□□□□□ -0.37
NUP98-204ENST00000397004 EXOSC3Q9NQT5 275 aaKnown RBP12.77□□□□□ -0.37
NUP98-204ENST00000397004 MGAT4CQ9UBM8 478 aa12.77□□□□□ -0.37
NUP98-204ENST00000397004 SLC22A7Q9Y694 548 aa12.77□□□□□ -0.37
NUP98-204ENST00000397004 ARHGEF17Q96PE2 2063 aaPredicted RBP12.76□□□□□ -0.37
NUP98-204ENST00000397004 MCRIP1C9JLW8 97 aa12.76□□□□□ -0.37
NUP98-204ENST00000397004 H0YC42 278 aa12.76□□□□□ -0.37
NUP98-204ENST00000397004 TYRP1P17643 537 aa12.76□□□□□ -0.37
NUP98-204ENST00000397004 CSRP1P21291 193 aaKnown RBP12.76□□□□□ -0.37
NUP98-204ENST00000397004 GABRA3P34903 492 aa12.76□□□□□ -0.37
NUP98-204ENST00000397004 P2RX1P51575 399 aa12.76□□□□□ -0.37
NUP98-204ENST00000397004 KIAA1024LP59773 190 aa12.76□□□□□ -0.37
NUP98-204ENST00000397004 PITPNAQ00169 270 aa12.76□□□□□ -0.37
NUP98-204ENST00000397004 KCNAB1Q14722 419 aa12.76□□□□□ -0.37
NUP98-204ENST00000397004 FCRL6Q6DN72 434 aa12.76□□□□□ -0.37
NUP98-204ENST00000397004 KCTD20Q7Z5Y7 419 aa12.76□□□□□ -0.37
NUP98-204ENST00000397004 ZNF671Q8TAW3 534 aa12.76□□□□□ -0.37
NUP98-204ENST00000397004 MFRPQ9BY79 579 aa12.76□□□□□ -0.37
NUP98-204ENST00000397004 NOX3Q9HBY0 568 aa12.76□□□□□ -0.37
NUP98-204ENST00000397004 C2orf16Q68DN1 1984 aa12.76□□□□□ -0.37
NUP98-204ENST00000397004 H3BSH0 61 aa12.76□□□□□ -0.37
NUP98-204ENST00000397004 ICAM2P13598 275 aa12.76□□□□□ -0.37
NUP98-204ENST00000397004 LSSP48449 732 aa12.76□□□□□ -0.37
NUP98-204ENST00000397004 SLITRK4Q8IW52 837 aa12.76□□□□□ -0.37
NUP98-204ENST00000397004 MOSPD2Q8NHP6 518 aa12.76□□□□□ -0.37
NUP98-204ENST00000397004 CLEC4MQ9H2X3 399 aaPredicted RBP12.76□□□□□ -0.37
NUP98-204ENST00000397004 DNAJB12Q9NXW2 375 aaKnown RBP12.76□□□□□ -0.37
NUP98-204ENST00000397004 MOKQ9UQ07 419 aa12.76□□□□□ -0.37
NUP98-204ENST00000397004 ANKRD20A5PA0PJZ0 165 aa12.76□□□□□ -0.37
NUP98-204ENST00000397004 PPM1BO75688 479 aa12.76□□□□□ -0.37
NUP98-204ENST00000397004 OR2A4O95047 310 aa12.76□□□□□ -0.37
NUP98-204ENST00000397004 CDK2P24941 298 aa12.76□□□□□ -0.37
NUP98-204ENST00000397004 EDNRAP25101 427 aa12.76□□□□□ -0.37
NUP98-204ENST00000397004 BTN1A1Q13410 526 aa12.76□□□□□ -0.37
NUP98-204ENST00000397004 HTR4Q13639 388 aa12.76□□□□□ -0.37
NUP98-204ENST00000397004 HSD17B12Q53GQ0 312 aa12.76□□□□□ -0.37
NUP98-204ENST00000397004 DCAF12L2Q5VW00 463 aa12.76□□□□□ -0.37
NUP98-204ENST00000397004 OR7E24Q6IFN5 339 aa12.76□□□□□ -0.37
NUP98-204ENST00000397004 MTSS1LQ765P7 747 aa12.76□□□□□ -0.37
NUP98-204ENST00000397004 SLC35F2Q8IXU6 374 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms