RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 TBXA2RP21731 343 aa9.23□□□□□ -0.93
NEDD8-202ENST00000396828 RPS4Y1P22090 263 aaKnown RBP9.23□□□□□ -0.93
NEDD8-202ENST00000396828 KCNJ10P78508 379 aa9.23□□□□□ -0.93
NEDD8-202ENST00000396828 SLC34A1Q06495 639 aa9.23□□□□□ -0.93
NEDD8-202ENST00000396828 ACKR1Q16570 336 aa9.23□□□□□ -0.93
NEDD8-202ENST00000396828 EXOC3L2Q2M3D2 409 aa9.23□□□□□ -0.93
NEDD8-202ENST00000396828 RNF220Q5VTB9 566 aa9.23□□□□□ -0.93
NEDD8-202ENST00000396828 ZNF836Q6ZNA1 936 aa9.23□□□□□ -0.93
NEDD8-202ENST00000396828 CHMP1BQ7LBR1 199 aa9.23□□□□□ -0.93
NEDD8-202ENST00000396828 HMGN2P46Q86SG4 172 aa9.23□□□□□ -0.93
NEDD8-202ENST00000396828 ZAR1Q86SH2 424 aa9.23□□□□□ -0.93
NEDD8-202ENST00000396828 CYP4Z1Q86W10 505 aa9.23□□□□□ -0.93
NEDD8-202ENST00000396828 VRK2Q86Y07 508 aa9.23□□□□□ -0.93
NEDD8-202ENST00000396828 P3H2Q8IVL5 708 aa9.23□□□□□ -0.93
NEDD8-202ENST00000396828 ZDHHC21Q8IVQ6 265 aa9.23□□□□□ -0.93
NEDD8-202ENST00000396828 CMIPQ8IY22 773 aa9.23□□□□□ -0.93
NEDD8-202ENST00000396828 MEIOBQ8N635 442 aa9.23□□□□□ -0.93
NEDD8-202ENST00000396828 IGFBPL1Q8WX77 278 aa9.23□□□□□ -0.93
NEDD8-202ENST00000396828 ZG16BQ96DA0 208 aa9.23□□□□□ -0.93
NEDD8-202ENST00000396828 ZNF347Q96SE7 839 aa9.23□□□□□ -0.93
NEDD8-202ENST00000396828 PIP5K1AQ99755 562 aa9.23□□□□□ -0.93
NEDD8-202ENST00000396828 BDH2Q9BUT1 245 aa9.23□□□□□ -0.93
NEDD8-202ENST00000396828 KLHL4Q9C0H6 718 aa9.23□□□□□ -0.93
NEDD8-202ENST00000396828 ABCG2Q9UNQ0 655 aa9.23□□□□□ -0.93
NEDD8-202ENST00000396828 FAM32AQ9Y421 112 aaKnown RBP9.23□□□□□ -0.93
NEDD8-202ENST00000396828 DTNAQ9Y4J8 743 aa9.23□□□□□ -0.93
NEDD8-202ENST00000396828 USF3Q68DE3 2245 aa9.23□□□□□ -0.93
NEDD8-202ENST00000396828 MXRA5Q9NR99 2828 aa9.23□□□□□ -0.93
NEDD8-202ENST00000396828 COL6A5A8TX70 2615 aa9.22□□□□□ -0.93
NEDD8-202ENST00000396828 NPIPA5A0A0B4J1W7 369 aa9.22□□□□□ -0.93
NEDD8-202ENST00000396828 NPIPA7E9PJI5 369 aa9.22□□□□□ -0.93
NEDD8-202ENST00000396828 C16orf97H3BN30 126 aa9.22□□□□□ -0.93
NEDD8-202ENST00000396828 hCG_2039718K7EN88 272 aa9.22□□□□□ -0.93
NEDD8-202ENST00000396828 KLF4O43474 513 aa9.22□□□□□ -0.93
NEDD8-202ENST00000396828 DEAF1O75398 565 aaPredicted RBP9.22□□□□□ -0.93
NEDD8-202ENST00000396828 LGI1O95970 557 aa9.22□□□□□ -0.93
NEDD8-202ENST00000396828 CST1P01037 141 aa9.22□□□□□ -0.93
NEDD8-202ENST00000396828 NGFRP08138 427 aa9.22□□□□□ -0.93
NEDD8-202ENST00000396828 NPIPA8P0DM63 369 aa9.22□□□□□ -0.93
NEDD8-202ENST00000396828 MAGEA2P43356 314 aa9.22□□□□□ -0.93
NEDD8-202ENST00000396828 OR1E2P47887 323 aa9.22□□□□□ -0.93
NEDD8-202ENST00000396828 PCYT1AP49585 367 aa9.22□□□□□ -0.93
NEDD8-202ENST00000396828 EEF1A1P68104 462 aaKnown RBP9.22□□□□□ -0.93
NEDD8-202ENST00000396828 GLIPR1L2Q4G1C9 344 aa9.22□□□□□ -0.93
NEDD8-202ENST00000396828 PDZK1Q5T2W1 519 aa9.22□□□□□ -0.93
NEDD8-202ENST00000396828 EEF1A1P5Q5VTE0 462 aa9.22□□□□□ -0.93
NEDD8-202ENST00000396828 FAM214BQ7L5A3 538 aa9.22□□□□□ -0.93
NEDD8-202ENST00000396828 PIWIL3Q7Z3Z3 882 aaKnown RBP9.22□□□□□ -0.93
NEDD8-202ENST00000396828 CARM1Q86X55 608 aa9.22□□□□□ -0.93
NEDD8-202ENST00000396828 LRRC75A-AS1Q8N1F1 130 aa9.22□□□□□ -0.93
NEDD8-202ENST00000396828 PQLC1Q8N2U9 271 aa9.22□□□□□ -0.93
NEDD8-202ENST00000396828 GATSQ8NAP1 163 aa9.22□□□□□ -0.93
NEDD8-202ENST00000396828 GPR32P1Q8NGA4 272 aa9.22□□□□□ -0.93
NEDD8-202ENST00000396828 OR4C3Q8NH37 302 aa9.22□□□□□ -0.93
NEDD8-202ENST00000396828 VANGL1Q8TAA9 524 aaPredicted RBP9.22□□□□□ -0.93
NEDD8-202ENST00000396828 LRTOMTQ8WZ04 291 aa9.22□□□□□ -0.93
NEDD8-202ENST00000396828 PIGTQ969N2 578 aa9.22□□□□□ -0.93
NEDD8-202ENST00000396828 ADGRG7Q96K78 797 aa9.22□□□□□ -0.93
NEDD8-202ENST00000396828 CCL19Q99731 98 aa9.22□□□□□ -0.93
NEDD8-202ENST00000396828 MDFIQ99750 246 aa9.22□□□□□ -0.93
NEDD8-202ENST00000396828 ELOVL5Q9NYP7 299 aa9.22□□□□□ -0.93
NEDD8-202ENST00000396828 ZNF226Q9NYT6 803 aa9.22□□□□□ -0.93
NEDD8-202ENST00000396828 STOML1Q9UBI4 398 aa9.22□□□□□ -0.93
NEDD8-202ENST00000396828 VDAC3Q9Y277 283 aa9.22□□□□□ -0.93
NEDD8-202ENST00000396828 SLC35A3Q9Y2D2 325 aa9.22□□□□□ -0.93
NEDD8-202ENST00000396828 ZNF175Q9Y473 711 aa9.22□□□□□ -0.93
NEDD8-202ENST00000396828 ATRQ13535 2644 aa9.21□□□□□ -0.93
NEDD8-202ENST00000396828 IGLV3-32A0A0A0MS00 114 aa9.21□□□□□ -0.94
NEDD8-202ENST00000396828 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.21□□□□□ -0.94
NEDD8-202ENST00000396828 CDHR4A6H8M9 788 aa9.21□□□□□ -0.94
NEDD8-202ENST00000396828 SERINC4A6NH21 518 aa9.21□□□□□ -0.94
NEDD8-202ENST00000396828 TMEM229AB2RXF0 380 aa9.21□□□□□ -0.94
NEDD8-202ENST00000396828 NPIPB9F8W1W9 429 aa9.21□□□□□ -0.94
NEDD8-202ENST00000396828 EIF1AYO14602 144 aaKnown RBP9.21□□□□□ -0.94
NEDD8-202ENST00000396828 CLOCKO15516 846 aa9.21□□□□□ -0.94
NEDD8-202ENST00000396828 ARHGEF9O43307 516 aa9.21□□□□□ -0.94
NEDD8-202ENST00000396828 NTN1O95631 604 aa9.21□□□□□ -0.94
NEDD8-202ENST00000396828 OXSR1O95747 527 aaPredicted RBP9.21□□□□□ -0.94
NEDD8-202ENST00000396828 CSTAP01040 98 aa9.21□□□□□ -0.94
NEDD8-202ENST00000396828 MT-ND1P03886 318 aa9.21□□□□□ -0.94
NEDD8-202ENST00000396828 TNFRSF1BP20333 461 aa9.21□□□□□ -0.94
NEDD8-202ENST00000396828 IL11P20809 199 aa9.21□□□□□ -0.94
NEDD8-202ENST00000396828 PCSK6P29122 969 aa9.21□□□□□ -0.94
NEDD8-202ENST00000396828 SHC1P29353 583 aa9.21□□□□□ -0.94
NEDD8-202ENST00000396828 IFNA8P32881 189 aa9.21□□□□□ -0.94
NEDD8-202ENST00000396828 EIF1AXP47813 144 aaKnown RBP9.21□□□□□ -0.94
NEDD8-202ENST00000396828 RNF144AP50876 292 aaPredicted RBP9.21□□□□□ -0.94
NEDD8-202ENST00000396828 ARHGDIAP52565 204 aa9.21□□□□□ -0.94
NEDD8-202ENST00000396828 RGS8P57771 180 aaPredicted RBP9.21□□□□□ -0.94
NEDD8-202ENST00000396828 SESN3P58005 492 aa9.21□□□□□ -0.94
NEDD8-202ENST00000396828 C17orf67Q0P5P2 114 aa9.21□□□□□ -0.94
NEDD8-202ENST00000396828 FGFBP1Q14512 234 aa9.21□□□□□ -0.94
NEDD8-202ENST00000396828 GANABQ14697 944 aaKnown RBP9.21□□□□□ -0.94
NEDD8-202ENST00000396828 ATP6AP1Q15904 470 aa9.21□□□□□ -0.94
NEDD8-202ENST00000396828 MAPK14Q16539 360 aa9.21□□□□□ -0.94
NEDD8-202ENST00000396828 CTU2Q2VPK5 515 aaKnown RBP9.21□□□□□ -0.94
NEDD8-202ENST00000396828 KLHL26Q53HC5 615 aa9.21□□□□□ -0.94
NEDD8-202ENST00000396828 MRPL2Q5T653 305 aaKnown RBP9.21□□□□□ -0.94
NEDD8-202ENST00000396828 PPP4R4Q6NUP7 873 aa9.21□□□□□ -0.94
NEDD8-202ENST00000396828 RANBP3LQ86VV4 465 aaPredicted RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms