RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 EBPQ15125 230 aaKnown RBP15.32■□□□□ 0.04
NUP50-202ENST00000396096 CCDC58Q4VC31 144 aa15.32■□□□□ 0.04
NUP50-202ENST00000396096 TP53I3Q53FA7 332 aa15.32■□□□□ 0.04
NUP50-202ENST00000396096 ACSM3Q53FZ2 586 aa15.32■□□□□ 0.04
NUP50-202ENST00000396096 RPTNQ6XPR3 784 aa15.32■□□□□ 0.04
NUP50-202ENST00000396096 TRILQ7L0X0 811 aa15.32■□□□□ 0.04
NUP50-202ENST00000396096 FAM122BQ7Z309 247 aa15.32■□□□□ 0.04
NUP50-202ENST00000396096 SLC35F3Q8IY50 421 aa15.32■□□□□ 0.04
NUP50-202ENST00000396096 ZNRF4Q8WWF5 429 aa15.32■□□□□ 0.04
NUP50-202ENST00000396096 CLIP3Q96DZ5 547 aa15.32■□□□□ 0.04
NUP50-202ENST00000396096 ADAM19Q9H013 955 aa15.32■□□□□ 0.04
NUP50-202ENST00000396096 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.32■□□□□ 0.049e-7■■■■□ 25.2
NUP50-202ENST00000396096 ZNF304Q9HCX3 659 aa15.32■□□□□ 0.04
NUP50-202ENST00000396096 MMP25Q9NPA2 562 aa15.32■□□□□ 0.04
NUP50-202ENST00000396096 CYSLTR2Q9NS75 346 aa15.32■□□□□ 0.04
NUP50-202ENST00000396096 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.31■□□□□ 0.04
NUP50-202ENST00000396096 A0A1W2PQD3 144 aa15.31■□□□□ 0.04
NUP50-202ENST00000396096 GLCEO94923 617 aa15.31■□□□□ 0.04
NUP50-202ENST00000396096 CD14P08571 375 aa15.31■□□□□ 0.04
NUP50-202ENST00000396096 FOLR1P15328 257 aa15.31■□□□□ 0.04
NUP50-202ENST00000396096 UQCRC1P31930 480 aa15.31■□□□□ 0.04
NUP50-202ENST00000396096 ACVR1BP36896 505 aa15.31■□□□□ 0.04
NUP50-202ENST00000396096 AFF3P51826 1226 aaKnown RBP15.31■□□□□ 0.04
NUP50-202ENST00000396096 HCCSP53701 268 aa15.31■□□□□ 0.04
NUP50-202ENST00000396096 SIRPAP78324 504 aa15.31■□□□□ 0.04
NUP50-202ENST00000396096 EGR4Q05215 589 aa15.31■□□□□ 0.04
NUP50-202ENST00000396096 FAM27D1Q5T7N8 215 aa15.31■□□□□ 0.04
NUP50-202ENST00000396096 TRIQKQ629K1 86 aa15.31■□□□□ 0.04
NUP50-202ENST00000396096 SFXN4Q6P4A7 337 aa15.31■□□□□ 0.04
NUP50-202ENST00000396096 RPL22L1Q6P5R6 122 aaKnown RBP15.31■□□□□ 0.04
NUP50-202ENST00000396096 EGFL6Q8IUX8 553 aa15.31■□□□□ 0.04
NUP50-202ENST00000396096 GPR135Q8IZ08 494 aa15.31■□□□□ 0.04
NUP50-202ENST00000396096 SLC25A45Q8N413 288 aa15.31■□□□□ 0.04
NUP50-202ENST00000396096 EXD3Q8N9H8 876 aa15.31■□□□□ 0.04
NUP50-202ENST00000396096 RASD2Q96D21 266 aa15.31■□□□□ 0.04
NUP50-202ENST00000396096 KCNJ15Q99712 375 aa15.31■□□□□ 0.04
NUP50-202ENST00000396096 B3GAT2Q9NPZ5 323 aa15.31■□□□□ 0.04
NUP50-202ENST00000396096 NCDNQ9UBB6 729 aa15.31■□□□□ 0.04
NUP50-202ENST00000396096 NPFFR2Q9Y5X5 522 aa15.31■□□□□ 0.04
NUP50-202ENST00000396096 MPDZO75970 2070 aa15.31■□□□□ 0.04
NUP50-202ENST00000396096 DNAH14Q0VDD8 3507 aa15.31■□□□□ 0.04
NUP50-202ENST00000396096 LINC00854A0A1B0GVQ3 168 aa15.31■□□□□ 0.04
NUP50-202ENST00000396096 B4DXG7 233 aa15.31■□□□□ 0.04
NUP50-202ENST00000396096 BCAT2O15382 392 aaPredicted RBP15.31■□□□□ 0.04
NUP50-202ENST00000396096 TSPAN2O60636 221 aa15.31■□□□□ 0.04
NUP50-202ENST00000396096 CCNKO75909 580 aa15.31■□□□□ 0.04
NUP50-202ENST00000396096 GIMD1P0DJR0 217 aa15.31■□□□□ 0.04
NUP50-202ENST00000396096 AQP2P41181 271 aa15.31■□□□□ 0.04
NUP50-202ENST00000396096 NAA10P41227 235 aaPredicted RBP15.31■□□□□ 0.04
NUP50-202ENST00000396096 CCR4P51679 360 aa15.31■□□□□ 0.04
NUP50-202ENST00000396096 DAB2P98082 770 aa15.31■□□□□ 0.04
NUP50-202ENST00000396096 CCDC85BQ15834 202 aaPredicted RBP15.31■□□□□ 0.04
NUP50-202ENST00000396096 KCNJ8Q15842 424 aa15.31■□□□□ 0.04
NUP50-202ENST00000396096 GXYLT1Q4G148 440 aa15.31■□□□□ 0.04
NUP50-202ENST00000396096 LINC01590Q5TEZ4 76 aa15.31■□□□□ 0.04
NUP50-202ENST00000396096 WDR74Q6RFH5 385 aaPredicted RBP15.31■□□□□ 0.04
NUP50-202ENST00000396096 C9orf40Q8IXQ3 194 aa15.31■□□□□ 0.04
NUP50-202ENST00000396096 C19orf18Q8NEA5 215 aa15.31■□□□□ 0.04
NUP50-202ENST00000396096 OR51L1Q8NGJ5 315 aa15.31■□□□□ 0.04
NUP50-202ENST00000396096 OR6F1Q8NGZ6 308 aa15.31■□□□□ 0.04
NUP50-202ENST00000396096 ZPLD1Q8TCW7 415 aa15.31■□□□□ 0.04
NUP50-202ENST00000396096 RPS4Y2Q8TD47 263 aa15.31■□□□□ 0.04
NUP50-202ENST00000396096 DAZLQ92904 295 aaKnown RBP15.31■□□□□ 0.04
NUP50-202ENST00000396096 CLDN23Q96B33 292 aa15.31■□□□□ 0.04
NUP50-202ENST00000396096 MOGAT1Q96PD6 335 aa15.31■□□□□ 0.04
NUP50-202ENST00000396096 ADOQ96SZ5 270 aa15.31■□□□□ 0.04
NUP50-202ENST00000396096 DUSP15Q9H1R2 295 aaPredicted RBP15.31■□□□□ 0.04
NUP50-202ENST00000396096 NANSQ9NR45 359 aa15.31■□□□□ 0.04
NUP50-202ENST00000396096 KLHL1Q9NR64 748 aa15.31■□□□□ 0.04
NUP50-202ENST00000396096 TEX13CA0A0J9YWL9 993 aa15.3■□□□□ 0.04
NUP50-202ENST00000396096 A0A1B0GX78 115 aa15.3■□□□□ 0.04
NUP50-202ENST00000396096 MEIOCA2RUB1 952 aa15.3■□□□□ 0.04
NUP50-202ENST00000396096 CCDC85CA6NKD9 419 aa15.3■□□□□ 0.04
NUP50-202ENST00000396096 FAM25AB3EWG3 89 aa15.3■□□□□ 0.04
NUP50-202ENST00000396096 FAM25CB3EWG5 89 aa15.3■□□□□ 0.04
NUP50-202ENST00000396096 FAM25GB3EWG6 89 aa15.3■□□□□ 0.04
NUP50-202ENST00000396096 ICOSLGO75144 302 aa15.3■□□□□ 0.04
NUP50-202ENST00000396096 GATBO75879 557 aaKnown RBP15.3■□□□□ 0.04
NUP50-202ENST00000396096 MAP2K3P46734 347 aa15.3■□□□□ 0.04
NUP50-202ENST00000396096 GDI2P50395 445 aaKnown RBP15.3■□□□□ 0.04
NUP50-202ENST00000396096 EMC4Q5J8M3 183 aa15.3■□□□□ 0.04
NUP50-202ENST00000396096 SNX33Q8WV41 574 aa15.3■□□□□ 0.04
NUP50-202ENST00000396096 ZNF524Q96C55 264 aa15.3■□□□□ 0.04
NUP50-202ENST00000396096 ZCCHC4Q9H5U6 513 aa15.3■□□□□ 0.04
NUP50-202ENST00000396096 MARCH7Q9H992 704 aa15.3■□□□□ 0.04
NUP50-202ENST00000396096 MALT1Q9UDY8 824 aa15.3■□□□□ 0.04
NUP50-202ENST00000396096 COPS3Q9UNS2 423 aa15.3■□□□□ 0.04
NUP50-202ENST00000396096 MOKQ9UQ07 419 aa15.3■□□□□ 0.04
NUP50-202ENST00000396096 ANKRD61A6NGH8 418 aa15.29■□□□□ 0.04
NUP50-202ENST00000396096 OR6C76A6NM76 312 aa15.29■□□□□ 0.04
NUP50-202ENST00000396096 ALG1L2C9J202 215 aa15.29■□□□□ 0.04
NUP50-202ENST00000396096 EIF4E2O60573 245 aaKnown RBP15.29■□□□□ 0.04
NUP50-202ENST00000396096 SELENOFO60613 162 aa15.29■□□□□ 0.04
NUP50-202ENST00000396096 ATP6V1G1O75348 118 aa15.29■□□□□ 0.04
NUP50-202ENST00000396096 NPR2P20594 1047 aa15.29■□□□□ 0.04
NUP50-202ENST00000396096 RBMS1P29558 406 aaKnown RBP15.29■□□□□ 0.04
NUP50-202ENST00000396096 SDHAP31040 664 aa15.29■□□□□ 0.04
NUP50-202ENST00000396096 CDKN2AP42771 156 aaKnown RBP15.29■□□□□ 0.04
NUP50-202ENST00000396096 KIR2DL3P43628 341 aa15.29■□□□□ 0.04
NUP50-202ENST00000396096 ZNF117Q03924 483 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms