RNA–Protein interactions for RNA: ENST00000389995.4

SOD1-202, Transcript of superoxide dismutase 1, humanhuman

TSL 3 BASIC

Gene SOD1, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-202ENST00000389995 SLC28A1O00337 649 aa10.17□□□□□ -0.78
SOD1-202ENST00000389995 AP3D1O14617 1153 aa10.17□□□□□ -0.78
SOD1-202ENST00000389995 SCAMP2O15127 329 aaKnown RBP10.17□□□□□ -0.78
SOD1-202ENST00000389995 AKR7A3O95154 331 aa10.17□□□□□ -0.78
SOD1-202ENST00000389995 HPXP02790 462 aa10.17□□□□□ -0.78
SOD1-202ENST00000389995 GAAP10253 952 aa10.17□□□□□ -0.78
SOD1-202ENST00000389995 SAGP10523 405 aaPredicted RBP10.17□□□□□ -0.78
SOD1-202ENST00000389995 UROSP10746 265 aa10.17□□□□□ -0.78
SOD1-202ENST00000389995 CPA3P15088 417 aa10.17□□□□□ -0.78
SOD1-202ENST00000389995 VAMP1P23763 118 aa10.17□□□□□ -0.78
SOD1-202ENST00000389995 SOAT1P35610 550 aa10.17□□□□□ -0.78
SOD1-202ENST00000389995 GPR6P46095 362 aaPredicted RBP10.17□□□□□ -0.78
SOD1-202ENST00000389995 IDH2P48735 452 aaKnown RBP10.17□□□□□ -0.78
SOD1-202ENST00000389995 NAA20P61599 178 aa10.17□□□□□ -0.78
SOD1-202ENST00000389995 SLC35A1P78382 337 aa10.17□□□□□ -0.78
SOD1-202ENST00000389995 PLAURQ03405 335 aa10.17□□□□□ -0.78
SOD1-202ENST00000389995 OTUD3Q5T2D3 398 aaPredicted RBP10.17□□□□□ -0.78
SOD1-202ENST00000389995 EMBQ6PCB8 327 aa10.17□□□□□ -0.78
SOD1-202ENST00000389995 SHISA2Q6UWI4 295 aa10.17□□□□□ -0.78
SOD1-202ENST00000389995 UGT2A3Q6UWM9 527 aa10.17□□□□□ -0.78
SOD1-202ENST00000389995 USP43Q70EL4 1123 aa10.17□□□□□ -0.78
SOD1-202ENST00000389995 EIF3MQ7L2H7 374 aaKnown RBP10.17□□□□□ -0.78
SOD1-202ENST00000389995 GRINAQ7Z429 371 aa10.17□□□□□ -0.78
SOD1-202ENST00000389995 GPAT4Q86UL3 456 aa10.17□□□□□ -0.78
SOD1-202ENST00000389995 RIBC1Q8N443 379 aaPredicted RBP10.17□□□□□ -0.78
SOD1-202ENST00000389995 NUP37Q8NFH4 326 aa10.17□□□□□ -0.78
SOD1-202ENST00000389995 OR9K2Q8NGE7 335 aa10.17□□□□□ -0.78
SOD1-202ENST00000389995 TAF15Q92804 592 aaKnown RBP eCLIP10.17□□□□□ -0.78
SOD1-202ENST00000389995 ZG16BQ96DA0 208 aa10.17□□□□□ -0.78
SOD1-202ENST00000389995 DUX5Q96PT3 197 aa10.17□□□□□ -0.78
SOD1-202ENST00000389995 NAA11Q9BSU3 229 aaPredicted RBP10.17□□□□□ -0.78
SOD1-202ENST00000389995 NELFAQ9H3P2 528 aa10.17□□□□□ -0.78
SOD1-202ENST00000389995 CRNNQ9UBG3 495 aaPredicted RBP10.17□□□□□ -0.78
SOD1-202ENST00000389995 ATP6V1HQ9UI12 483 aa10.17□□□□□ -0.78
SOD1-202ENST00000389995 MID2Q9UJV3 735 aa10.17□□□□□ -0.78
SOD1-202ENST00000389995 TMED7Q9Y3B3 224 aa10.17□□□□□ -0.78
SOD1-202ENST00000389995 PPIAL4AQ9Y536 164 aa10.17□□□□□ -0.78
SOD1-202ENST00000389995 LSM1O15116 133 aaKnown RBP10.16□□□□□ -0.78
SOD1-202ENST00000389995 CFLARO15519 480 aa10.16□□□□□ -0.78
SOD1-202ENST00000389995 DNPH1O43598 174 aa10.16□□□□□ -0.78
SOD1-202ENST00000389995 ZNF500O60304 480 aaPredicted RBP10.16□□□□□ -0.78
SOD1-202ENST00000389995 UPK3AO75631 287 aa10.16□□□□□ -0.78
SOD1-202ENST00000389995 PNPP00491 289 aa10.16□□□□□ -0.78
SOD1-202ENST00000389995 IGLV1-44P01699 117 aa10.16□□□□□ -0.78
SOD1-202ENST00000389995 MATN1P21941 496 aa10.16□□□□□ -0.78
SOD1-202ENST00000389995 HPCAL1P37235 193 aa10.16□□□□□ -0.78
SOD1-202ENST00000389995 LIMS1P48059 325 aa10.16□□□□□ -0.78
SOD1-202ENST00000389995 SELENOPP49908 381 aa10.16□□□□□ -0.78
SOD1-202ENST00000389995 DNAJB13P59910 316 aa10.16□□□□□ -0.78
SOD1-202ENST00000389995 LMO4P61968 165 aa10.16□□□□□ -0.78
SOD1-202ENST00000389995 NPRL3Q12980 569 aa10.16□□□□□ -0.78
SOD1-202ENST00000389995 SCGB2A2Q13296 93 aa10.16□□□□□ -0.78
SOD1-202ENST00000389995 PTGR1Q14914 329 aa10.16□□□□□ -0.78
SOD1-202ENST00000389995 KRT80Q6KB66 452 aa10.16□□□□□ -0.78
SOD1-202ENST00000389995 KRTCAP2Q8N6L1 136 aa10.16□□□□□ -0.78
SOD1-202ENST00000389995 POMGNT2Q8NAT1 580 aa10.16□□□□□ -0.78
SOD1-202ENST00000389995 FAM71CQ8NEG0 241 aa10.16□□□□□ -0.78
SOD1-202ENST00000389995 OR4F15Q8NGB8 312 aa10.16□□□□□ -0.78
SOD1-202ENST00000389995 OR51F2Q8NH61 342 aa10.16□□□□□ -0.78
SOD1-202ENST00000389995 OR5P2Q8WZ92 322 aa10.16□□□□□ -0.78
SOD1-202ENST00000389995 YIPF5Q969M3 257 aa10.16□□□□□ -0.78
SOD1-202ENST00000389995 MRPL24Q96A35 216 aaKnown RBP10.16□□□□□ -0.78
SOD1-202ENST00000389995 TMEM45BQ96B21 275 aa10.16□□□□□ -0.78
SOD1-202ENST00000389995 MTERF3Q96E29 417 aa10.16□□□□□ -0.78
SOD1-202ENST00000389995 METTL2AQ96IZ6 378 aaKnown RBP10.16□□□□□ -0.78
SOD1-202ENST00000389995 RACGAP1Q9H0H5 632 aa10.16□□□□□ -0.78
SOD1-202ENST00000389995 ZNF442Q9H7R0 627 aa10.16□□□□□ -0.78
SOD1-202ENST00000389995 TRAPPC4Q9Y296 219 aa10.16□□□□□ -0.78
SOD1-202ENST00000389995 IGHV2OR16-5A0A0B4J2B6 119 aa10.15□□□□□ -0.78
SOD1-202ENST00000389995 TMEM233B4DJY2 109 aa10.15□□□□□ -0.78
SOD1-202ENST00000389995 ZNF587BE7ETH6 402 aa10.15□□□□□ -0.78
SOD1-202ENST00000389995 H3BQF6 201 aa10.15□□□□□ -0.78
SOD1-202ENST00000389995 ANKRD28O15084 1053 aa10.15□□□□□ -0.78
SOD1-202ENST00000389995 STX11O75558 287 aa10.15□□□□□ -0.78
SOD1-202ENST00000389995 KRT16P08779 473 aa10.15□□□□□ -0.78
SOD1-202ENST00000389995 NUDT17P0C025 328 aa10.15□□□□□ -0.78
SOD1-202ENST00000389995 ZFP36P26651 326 aaKnown RBP10.15□□□□□ -0.78
SOD1-202ENST00000389995 ALDH3B1P43353 468 aa10.15□□□□□ -0.78
SOD1-202ENST00000389995 KHKP50053 298 aa10.15□□□□□ -0.78
SOD1-202ENST00000389995 SEC24CP53992 1094 aa10.15□□□□□ -0.78
SOD1-202ENST00000389995 UBA52P62987 128 aaKnown RBP10.15□□□□□ -0.78
SOD1-202ENST00000389995 HBA1P69905 142 aa10.15□□□□□ -0.78
SOD1-202ENST00000389995 SNTB2Q13425 540 aaKnown RBP10.15□□□□□ -0.78
SOD1-202ENST00000389995 CEACAM7Q14002 265 aa10.15□□□□□ -0.78
SOD1-202ENST00000389995 MAD2L1BPQ15013 274 aaPredicted RBP10.15□□□□□ -0.78
SOD1-202ENST00000389995 OR7A5Q15622 319 aa10.15□□□□□ -0.78
SOD1-202ENST00000389995 WDR93Q6P2C0 686 aa10.15□□□□□ -0.78
SOD1-202ENST00000389995 R3HCC1LQ7Z5L2 792 aaKnown RBP10.15□□□□□ -0.78
SOD1-202ENST00000389995 C10orf107Q8IVU9 208 aa10.15□□□□□ -0.78
SOD1-202ENST00000389995 ZNF454Q8N9F8 522 aa10.15□□□□□ -0.78
SOD1-202ENST00000389995 PSMA8Q8TAA3 256 aa10.15□□□□□ -0.78
SOD1-202ENST00000389995 AENQ8WTP8 325 aaKnown RBP10.15□□□□□ -0.78
SOD1-202ENST00000389995 CNOT9Q92600 299 aaKnown RBP10.15□□□□□ -0.78
SOD1-202ENST00000389995 RAB8BQ92930 207 aa10.15□□□□□ -0.78
SOD1-202ENST00000389995 BOD1Q96IK1 185 aa10.15□□□□□ -0.78
SOD1-202ENST00000389995 APOPT1Q96IL0 206 aa10.15□□□□□ -0.78
SOD1-202ENST00000389995 ANKRD27Q96NW4 1050 aa10.15□□□□□ -0.78
SOD1-202ENST00000389995 JMJD8Q96S16 334 aa10.15□□□□□ -0.78
SOD1-202ENST00000389995 C1orf50Q9BV19 199 aa10.15□□□□□ -0.78
SOD1-202ENST00000389995 MRPL37Q9BZE1 423 aaKnown RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms