RNA–Protein interactions for RNA: ENST00000389418.8

PTPRN2-203, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-203ENST00000389418 RPL22L1Q6P5R6 122 aaKnown RBP12.03□□□□□ -0.48
PTPRN2-203ENST00000389418 ANKRD13BQ86YJ7 626 aa12.03□□□□□ -0.48
PTPRN2-203ENST00000389418 ESX1Q8N693 406 aa12.03□□□□□ -0.48
PTPRN2-203ENST00000389418 LSM14AQ8ND56 463 aaKnown RBP12.03□□□□□ -0.48
PTPRN2-203ENST00000389418 SLC6A7Q99884 636 aa12.03□□□□□ -0.48
PTPRN2-203ENST00000389418 SGPP1Q9BX95 441 aa12.03□□□□□ -0.48
PTPRN2-203ENST00000389418 C12orf4Q9NQ89 552 aa12.03□□□□□ -0.48
PTPRN2-203ENST00000389418 VSX1Q9NZR4 365 aaPredicted RBP12.03□□□□□ -0.48
PTPRN2-203ENST00000389418 A0A1B0GTL3 188 aa12.03□□□□□ -0.48
PTPRN2-203ENST00000389418 A6NIN4 97 aa12.03□□□□□ -0.48
PTPRN2-203ENST00000389418 PLPP1O14494 284 aa12.03□□□□□ -0.48
PTPRN2-203ENST00000389418 ZNF195O14628 629 aa12.03□□□□□ -0.48
PTPRN2-203ENST00000389418 RRP8O43159 456 aaKnown RBP12.03□□□□□ -0.48
PTPRN2-203ENST00000389418 GASTP01350 101 aa12.03□□□□□ -0.48
PTPRN2-203ENST00000389418 GABRG2P18507 467 aa12.03□□□□□ -0.48
PTPRN2-203ENST00000389418 TACR3P29371 465 aa12.03□□□□□ -0.48
PTPRN2-203ENST00000389418 RGS6P49758 472 aa12.03□□□□□ -0.48
PTPRN2-203ENST00000389418 ILKQ13418 452 aa12.03□□□□□ -0.48
PTPRN2-203ENST00000389418 BORAQ6PGQ7 559 aa12.03□□□□□ -0.48
PTPRN2-203ENST00000389418 CD300LGQ6UXG3 332 aa12.03□□□□□ -0.48
PTPRN2-203ENST00000389418 LIMS2Q7Z4I7 341 aa12.03□□□□□ -0.48
PTPRN2-203ENST00000389418 SCGB1C1Q8TD33 95 aa12.03□□□□□ -0.48
PTPRN2-203ENST00000389418 CHPT1Q8WUD6 406 aa12.03□□□□□ -0.48
PTPRN2-203ENST00000389418 MUCL1Q96DR8 90 aa12.03□□□□□ -0.48
PTPRN2-203ENST00000389418 SENP5Q96HI0 755 aaPredicted RBP12.03□□□□□ -0.48
PTPRN2-203ENST00000389418 LMF1Q96S06 567 aa12.03□□□□□ -0.48
PTPRN2-203ENST00000389418 PLSCR5A0PG75 271 aa12.02□□□□□ -0.48
PTPRN2-203ENST00000389418 BOLA2-SMG1P6H3BVE0 249 aa12.02□□□□□ -0.48
PTPRN2-203ENST00000389418 UTS2O95399 124 aa12.02□□□□□ -0.48
PTPRN2-203ENST00000389418 NSA2O95478 260 aaKnown RBP12.02□□□□□ -0.48
PTPRN2-203ENST00000389418 PTTG1O95997 202 aa12.02□□□□□ -0.48
PTPRN2-203ENST00000389418 TP53P04637 393 aaPredicted RBP12.02□□□□□ -0.48
PTPRN2-203ENST00000389418 IFNGR1P15260 489 aa12.02□□□□□ -0.48
PTPRN2-203ENST00000389418 ABOP16442 354 aa12.02□□□□□ -0.48
PTPRN2-203ENST00000389418 HACD4Q5VWC8 232 aa12.02□□□□□ -0.48
PTPRN2-203ENST00000389418 TMEM215Q68D42 235 aa12.02□□□□□ -0.48
PTPRN2-203ENST00000389418 DLEU7Q6UYE1 221 aa12.02□□□□□ -0.48
PTPRN2-203ENST00000389418 GRAMD2AQ8IUY3 354 aa12.02□□□□□ -0.48
PTPRN2-203ENST00000389418 GGHQ92820 318 aa12.02□□□□□ -0.48
PTPRN2-203ENST00000389418 MS4A6EQ96DS6 147 aa12.02□□□□□ -0.48
PTPRN2-203ENST00000389418 EGLN3Q9H6Z9 239 aa12.02□□□□□ -0.48
PTPRN2-203ENST00000389418 UBE2J1Q9Y385 318 aaPredicted RBP12.02□□□□□ -0.48
PTPRN2-203ENST00000389418 SDK2Q58EX2 2172 aa12.02□□□□□ -0.48
PTPRN2-203ENST00000389418 KDM4EB2RXH2 506 aaPredicted RBP12.02□□□□□ -0.49
PTPRN2-203ENST00000389418 H0YIG0 161 aa12.02□□□□□ -0.49
PTPRN2-203ENST00000389418 NRG2O14511 850 aaPredicted RBP12.02□□□□□ -0.49
PTPRN2-203ENST00000389418 SUSD5O60279 629 aa12.02□□□□□ -0.49
PTPRN2-203ENST00000389418 SBK3P0C264 359 aa12.02□□□□□ -0.49
PTPRN2-203ENST00000389418 CYCSP99999 105 aaKnown RBP12.02□□□□□ -0.49
PTPRN2-203ENST00000389418 ACSM3Q53FZ2 586 aa12.02□□□□□ -0.49
PTPRN2-203ENST00000389418 NHSL2Q5HYW2 709 aa12.02□□□□□ -0.49
PTPRN2-203ENST00000389418 HES5Q5TA89 166 aa12.02□□□□□ -0.49
PTPRN2-203ENST00000389418 TBPL2Q6SJ96 375 aa12.02□□□□□ -0.49
PTPRN2-203ENST00000389418 MED25Q71SY5 747 aa12.02□□□□□ -0.49
PTPRN2-203ENST00000389418 TRMT10AQ8TBZ6 339 aaKnown RBP12.02□□□□□ -0.49
PTPRN2-203ENST00000389418 CPT1CQ8TCG5 803 aa12.02□□□□□ -0.49
PTPRN2-203ENST00000389418 ZNF566Q969W8 418 aa12.02□□□□□ -0.49
PTPRN2-203ENST00000389418 RRNAD1Q96FB5 475 aaKnown RBP12.02□□□□□ -0.49
PTPRN2-203ENST00000389418 ZNF471Q9BX82 626 aaPredicted RBP12.02□□□□□ -0.49
PTPRN2-203ENST00000389418 PPT2Q9UMR5 302 aa12.02□□□□□ -0.49
PTPRN2-203ENST00000389418 EMC9Q9Y3B6 208 aa12.02□□□□□ -0.49
PTPRN2-203ENST00000389418 TRAV18A0A075B6X5 111 aa12.02□□□□□ -0.49
PTPRN2-203ENST00000389418 POU2F2P09086 479 aa12.02□□□□□ -0.49
PTPRN2-203ENST00000389418 CDK2P24941 298 aa12.02□□□□□ -0.49
PTPRN2-203ENST00000389418 DPP4P27487 766 aa12.02□□□□□ -0.49
PTPRN2-203ENST00000389418 CD1CP29017 333 aa12.02□□□□□ -0.49
PTPRN2-203ENST00000389418 LIM2P55344 173 aa12.02□□□□□ -0.49
PTPRN2-203ENST00000389418 TRMT12Q53H54 448 aaKnown RBP12.02□□□□□ -0.49
PTPRN2-203ENST00000389418 COL13A1Q5TAT6 717 aaPredicted RBP12.02□□□□□ -0.49
PTPRN2-203ENST00000389418 BEND4Q6ZU67 534 aa12.02□□□□□ -0.49
PTPRN2-203ENST00000389418 OR4F15Q8NGB8 312 aa12.02□□□□□ -0.49
PTPRN2-203ENST00000389418 OR1J2Q8NGS2 313 aa12.02□□□□□ -0.49
PTPRN2-203ENST00000389418 RPL3LQ92901 407 aaKnown RBP12.02□□□□□ -0.49
PTPRN2-203ENST00000389418 RAB39BQ96DA2 213 aa12.02□□□□□ -0.49
PTPRN2-203ENST00000389418 PKMYT1Q99640 499 aa12.02□□□□□ -0.49
PTPRN2-203ENST00000389418 C7orf50Q9BRJ6 194 aaKnown RBP12.02□□□□□ -0.49
PTPRN2-203ENST00000389418 IER2Q9BTL4 223 aa12.02□□□□□ -0.49
PTPRN2-203ENST00000389418 ZNF350Q9GZX5 532 aa12.02□□□□□ -0.49
PTPRN2-203ENST00000389418 KCNN3Q9UGI6 736 aa12.02□□□□□ -0.49
PTPRN2-203ENST00000389418 DCDC2BA2VCK2 349 aa12.02□□□□□ -0.49
PTPRN2-203ENST00000389418 KLK8O60259 260 aa12.02□□□□□ -0.49
PTPRN2-203ENST00000389418 TOXO94900 526 aa12.02□□□□□ -0.49
PTPRN2-203ENST00000389418 HTR3BO95264 441 aa12.02□□□□□ -0.49
PTPRN2-203ENST00000389418 PEX11BO96011 259 aa12.02□□□□□ -0.49
PTPRN2-203ENST00000389418 MT-ATP6P00846 226 aa12.02□□□□□ -0.49
PTPRN2-203ENST00000389418 RFC3P40938 356 aa12.02□□□□□ -0.49
PTPRN2-203ENST00000389418 GPR50Q13585 617 aa12.02□□□□□ -0.49
PTPRN2-203ENST00000389418 SYT13Q7L8C5 426 aa12.02□□□□□ -0.49
PTPRN2-203ENST00000389418 MRPL41Q8IXM3 137 aaKnown RBP12.02□□□□□ -0.49
PTPRN2-203ENST00000389418 OR5M1Q8NGP8 315 aa12.02□□□□□ -0.49
PTPRN2-203ENST00000389418 TCEAL3Q969E4 200 aa12.02□□□□□ -0.49
PTPRN2-203ENST00000389418 ELF4Q99607 663 aaPredicted RBP12.02□□□□□ -0.49
PTPRN2-203ENST00000389418 AK6Q9Y3D8 172 aaKnown RBP12.02□□□□□ -0.49
PTPRN2-203ENST00000389418 TMEM184BQ9Y519 407 aaPredicted RBP12.02□□□□□ -0.49
PTPRN2-203ENST00000389418 TMEM269A0A1B0GVZ9 245 aa12.01□□□□□ -0.49
PTPRN2-203ENST00000389418 METTL15A6NJ78 407 aa12.01□□□□□ -0.49
PTPRN2-203ENST00000389418 SLC33A1O00400 549 aaPredicted RBP12.01□□□□□ -0.49
PTPRN2-203ENST00000389418 LCMT2O60294 686 aaKnown RBP12.01□□□□□ -0.49
PTPRN2-203ENST00000389418 IGHV3-9P01782 118 aa12.01□□□□□ -0.49
PTPRN2-203ENST00000389418 CSF1P09603 554 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms