RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 POTEKPQ9BYX7 375 aa-2.99□□□□□ -2.89
RNU6-1340P-201ENST00000384438 MIS12Q9H081 205 aa-2.99□□□□□ -2.89
RNU6-1340P-201ENST00000384438 CYP4F30PQ9H0H9 118 aa-2.99□□□□□ -2.89
RNU6-1340P-201ENST00000384438 OR51V1Q9H2C8 321 aa-2.99□□□□□ -2.89
RNU6-1340P-201ENST00000384438 C1orf198Q9H425 327 aa-2.99□□□□□ -2.89
RNU6-1340P-201ENST00000384438 EPHX3Q9H6B9 360 aa-2.99□□□□□ -2.89
RNU6-1340P-201ENST00000384438 CCDC134Q9H6E4 229 aa-2.99□□□□□ -2.89
RNU6-1340P-201ENST00000384438 UBE2ZQ9H832 354 aaPredicted RBP-2.99□□□□□ -2.89
RNU6-1340P-201ENST00000384438 CCL28Q9NRJ3 127 aa-2.99□□□□□ -2.89
RNU6-1340P-201ENST00000384438 DDX19AQ9NUU7 478 aaKnown RBP-2.99□□□□□ -2.89
RNU6-1340P-201ENST00000384438 C21orf62Q9NYP8 219 aa-2.99□□□□□ -2.89
RNU6-1340P-201ENST00000384438 UBA2Q9UBT2 640 aaPredicted RBP-2.99□□□□□ -2.89
RNU6-1340P-201ENST00000384438 HMGXB4Q9UGU5 601 aa-2.99□□□□□ -2.89
RNU6-1340P-201ENST00000384438 PILRBQ9UKJ0 227 aa-2.99□□□□□ -2.89
RNU6-1340P-201ENST00000384438 ENTPD4Q9Y227 616 aa-2.99□□□□□ -2.89
RNU6-1340P-201ENST00000384438 RCE1Q9Y256 329 aa-2.99□□□□□ -2.89
RNU6-1340P-201ENST00000384438 GPR52Q9Y2T5 361 aa-2.99□□□□□ -2.89
RNU6-1340P-201ENST00000384438 ALG6Q9Y672 507 aa-2.99□□□□□ -2.89
RNU6-1340P-201ENST00000384438 PCDH11YQ9BZA8 1340 aa-2.99□□□□□ -2.89
RNU6-1340P-201ENST00000384438 ZNF532Q9HCE3 1301 aa-2.99□□□□□ -2.89
RNU6-1340P-201ENST00000384438 MYO18AQ92614 2054 aaKnown RBP-3□□□□□ -2.89
RNU6-1340P-201ENST00000384438 MEIKINA0A087WXM9 373 aa-3□□□□□ -2.89
RNU6-1340P-201ENST00000384438 IGHV3-49A0A0A0MS15 119 aa-3□□□□□ -2.89
RNU6-1340P-201ENST00000384438 A0A0J9YX75 114 aa-3□□□□□ -2.89
RNU6-1340P-201ENST00000384438 CCDC162PA2VCL2 907 aa-3□□□□□ -2.89
RNU6-1340P-201ENST00000384438 J3KTA2 159 aa-3□□□□□ -2.89
RNU6-1340P-201ENST00000384438 RPS6KA5O75582 802 aa-3□□□□□ -2.89
RNU6-1340P-201ENST00000384438 SERPINB7O75635 380 aa-3□□□□□ -2.89
RNU6-1340P-201ENST00000384438 RFPL3O75679 317 aa-3□□□□□ -2.89
RNU6-1340P-201ENST00000384438 NBPF7P0C2Y1 421 aaPredicted RBP-3□□□□□ -2.89
RNU6-1340P-201ENST00000384438 ANKRD34CP0C6C1 535 aa-3□□□□□ -2.89
RNU6-1340P-201ENST00000384438 ZDHHC11BP0C7U3 371 aa-3□□□□□ -2.89
RNU6-1340P-201ENST00000384438 PRPS1L1P21108 318 aa-3□□□□□ -2.89
RNU6-1340P-201ENST00000384438 NUP62P37198 522 aaPredicted RBP-3□□□□□ -2.89
RNU6-1340P-201ENST00000384438 HTR5AP47898 357 aa-3□□□□□ -2.89
RNU6-1340P-201ENST00000384438 PCP4P48539 62 aa-3□□□□□ -2.89
RNU6-1340P-201ENST00000384438 VSX2P58304 361 aaPredicted RBP-3□□□□□ -2.89
RNU6-1340P-201ENST00000384438 EXOSC2Q13868 293 aaKnown RBP-3□□□□□ -2.89
RNU6-1340P-201ENST00000384438 ZNF345Q14585 488 aa-3□□□□□ -2.89
RNU6-1340P-201ENST00000384438 SLC18A3Q16572 532 aa-3□□□□□ -2.89
RNU6-1340P-201ENST00000384438 PTPN20Q4JDL3 420 aa-3□□□□□ -2.89
RNU6-1340P-201ENST00000384438 YIF1BQ5BJH7 314 aa-3□□□□□ -2.89
RNU6-1340P-201ENST00000384438 BEND3Q5T5X7 828 aa-3□□□□□ -2.89
RNU6-1340P-201ENST00000384438 SEL1L2Q5TEA6 688 aa-3□□□□□ -2.89
RNU6-1340P-201ENST00000384438 SBSNQ6UWP8 590 aa-3□□□□□ -2.89
RNU6-1340P-201ENST00000384438 STAC2Q6ZMT1 411 aa-3□□□□□ -2.89
RNU6-1340P-201ENST00000384438 SLC16A13Q7RTY0 426 aa-3□□□□□ -2.89
RNU6-1340P-201ENST00000384438 TADA2BQ86TJ2 420 aa-3□□□□□ -2.89
RNU6-1340P-201ENST00000384438 ELMOD1Q8N336 334 aa-3□□□□□ -2.89
RNU6-1340P-201ENST00000384438 GTPBP8Q8N3Z3 284 aaPredicted RBP-3□□□□□ -2.89
RNU6-1340P-201ENST00000384438 Q8N814 137 aa-3□□□□□ -2.89
RNU6-1340P-201ENST00000384438 CHST4Q8NCG5 386 aa-3□□□□□ -2.89
RNU6-1340P-201ENST00000384438 TMEM185AQ8NFB2 350 aa-3□□□□□ -2.89
RNU6-1340P-201ENST00000384438 OR4A5Q8NH83 315 aa-3□□□□□ -2.89
RNU6-1340P-201ENST00000384438 ACTRT1Q8TDG2 376 aa-3□□□□□ -2.89
RNU6-1340P-201ENST00000384438 NCSTNQ92542 709 aa-3□□□□□ -2.89
RNU6-1340P-201ENST00000384438 RAD54LQ92698 747 aa-3□□□□□ -2.89
RNU6-1340P-201ENST00000384438 TMEM186Q96B77 213 aa-3□□□□□ -2.89
RNU6-1340P-201ENST00000384438 ELMOD3Q96FG2 381 aa-3□□□□□ -2.89
RNU6-1340P-201ENST00000384438 NSMCE2Q96MF7 247 aa-3□□□□□ -2.89
RNU6-1340P-201ENST00000384438 TGM7Q96PF1 710 aa-3□□□□□ -2.89
RNU6-1340P-201ENST00000384438 CCT7Q99832 543 aa-3□□□□□ -2.89
RNU6-1340P-201ENST00000384438 PCGF1Q9BSM1 259 aa-3□□□□□ -2.89
RNU6-1340P-201ENST00000384438 NTMT1Q9BV86 223 aa-3□□□□□ -2.89
RNU6-1340P-201ENST00000384438 ANKRD60Q9BZ19 345 aa-3□□□□□ -2.89
RNU6-1340P-201ENST00000384438 TGIF2Q9GZN2 237 aa-3□□□□□ -2.89
RNU6-1340P-201ENST00000384438 AGPAT4-IT1Q9H0P7 198 aa-3□□□□□ -2.89
RNU6-1340P-201ENST00000384438 OSGEPL1Q9H4B0 414 aa-3□□□□□ -2.89
RNU6-1340P-201ENST00000384438 HHATLQ9HCP6 504 aa-3□□□□□ -2.89
RNU6-1340P-201ENST00000384438 EXOSC4Q9NPD3 245 aaKnown RBP-3□□□□□ -2.89
RNU6-1340P-201ENST00000384438 OR1A1Q9P1Q5 309 aa-3□□□□□ -2.89
RNU6-1340P-201ENST00000384438 TRPC4Q9UBN4 977 aa-3□□□□□ -2.89
RNU6-1340P-201ENST00000384438 TSPYL4Q9UJ04 414 aa-3□□□□□ -2.89
RNU6-1340P-201ENST00000384438 ABT1Q9ULW3 272 aaKnown RBP-3□□□□□ -2.89
RNU6-1340P-201ENST00000384438 UBQLN1Q9UMX0 589 aaKnown RBP-3□□□□□ -2.89
RNU6-1340P-201ENST00000384438 FAM96BQ9Y3D0 163 aa-3□□□□□ -2.89
RNU6-1340P-201ENST00000384438 HEBP2Q9Y5Z4 205 aa-3□□□□□ -2.89
RNU6-1340P-201ENST00000384438 PHF3Q92576 2039 aaKnown RBP-3□□□□□ -2.89
RNU6-1340P-201ENST00000384438 COL24A1Q17RW2 1714 aa-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 WDR62O43379 1518 aa-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 CCDC163A0A0D9SF12 145 aa-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 PNMA6EA0A0J9YXQ4 647 aa-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 HYKKA2RU49 373 aa-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 GMNCA6NCL1 334 aa-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 NUPR2A6NF83 97 aa-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 NEDD8-MDP1E9PL57 170 aa-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 CACNB4O00305 520 aaPredicted RBP-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 KMOO15229 486 aa-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 ZNF208O43345 1280 aa-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 TRAPPC3O43617 180 aa-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 KPNA6O60684 536 aa-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 RPP40O75818 363 aaKnown RBP-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 NEBLO76041 1014 aa-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 SLC25A14O95258 325 aaPredicted RBP-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 KLK1P06870 262 aa-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 RPL17P18621 184 aaKnown RBP-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 VDAC1P21796 283 aa-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 ME2P23368 584 aa-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 PPP2R1AP30153 589 aa-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 MNDAP41218 407 aa-3.01□□□□□ -2.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms